Bunya-ONT-Gen results

MultiQC

Run-wide QC summary.

EPI2ME report

Interactive run report from wf-metagenomics (EPI2ME Labs).

Krona charts

Interactive taxonomic composition.

• SRR34843736.krona.html
• SRR34843737.krona.html
• SRR34843738.krona.html
• SRR34843739.krona.html

Phylogeny

Trees and IQ-TREE outputs.

• concat.contree
• concat.iqtree
• concat.treefile
• Phylogenetic_tree.jpg

Variant distribution by segment from VCFs

Static image summarizing variant locations across L/M/S segments.

Variants (VCF)

• SRR34843736.vcf
• SRR34843737.vcf
• SRR34843738.vcf
• SRR34843739.vcf

Run report (TSV)

• assembly_stats_summary.tsv
• mapped_reads_summary.tsv