Cromwell workflow report

rMAP-GWAS

Reproducible microbial GWAS from paired-end reads for one explicitly coded binary phenotype per run, including gene presence/absence GWAS, optional SNP marker GWAS, population-structure visualization, post-GWAS reference annotation, and ranked association reporting.

CromwellDockerizedDistance-corrected pyseerMulti-pathogen readyExplicit phenotype codingAMR interpretation guardrailsGenBank annotation rescueOptional SNP GWAS
GWAS phenotype being tested: This run is framed as an AMR GWAS. The primary phenotype is phenotypic resistance versus susceptibility for the configured drug, drug class, or AMR trait. In the pyseer model, case (vancomycin resistant) is coded as 1 and control (vancomycin sensitive) is coded as 0. Confirm that resistant isolates are mapped to the case class and susceptible isolates are mapped to the control class before interpreting candidate markers.
Association scope: AMR-specific guardrail: Association results should be interpreted as statistical marker-phenotype associations, not as final clinical resistance calls. Gene presence/absence is the primary marker set; optional SNP GWAS adds point-mutation markers. Sequencing depth, assembly quality, species background, multiple genes in the same antibiotic class, plasmid linkage, and phenotype quality should be reviewed during filtering and interpretation.
Sample-size interpretation note: This run has 100 samples (50 cases (vancomycin resistant) and 50 controls (vancomycin sensitive)). Interpret association strength in relation to cohort size, phenotype balance, population structure, and independent validation before making biological, clinical, or public-health claims.
cases (vancomycin resistant)
50
controls (vancomycin sensitive)
50
Total samples
100
Top gene hit
group_574
group_574 | HMPREF0351_RS07175 | none confidence | identity=27.75% | coverage=2.60%
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01 Phenotype legend and coding

Brief interpretation: This section confirms the exact binary contrast used by pyseer: case (vancomycin resistant) is coded as 1 and control (vancomycin sensitive) is coded as 0. Confirm that these labels match the study metadata before interpreting associations.
Phenotype tested: Binary phenotype VRE_Resistant_vs_Sensitive_VRE. Configured contrast: phenotypic resistance versus susceptibility. The report displays the metadata-derived biological contrast throughout the HTML: case (vancomycin resistant) = 1 and control (vancomycin sensitive) = 0.
ClassPyseer codingMetadata columnMetadata value used for displaySamplesReport label
case1VRE_Resistant_vs_Sensitive_VREvancomycin resistant50case (vancomycin resistant)
control0VRE_Resistant_vs_Sensitive_VREvancomycin sensitive50control (vancomycin sensitive)
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01b AMR phenotype and association scope

Brief interpretation: This section addresses AMR-specific interpretation concerns: resistance versus susceptibility coding, species background, depth and assembly quality, SNP/point mutations, and co-occurring resistance genes for the case (vancomycin resistant) versus control (vancomycin sensitive) contrast.
Configured phenotype: This run is framed as an AMR GWAS. The primary phenotype is phenotypic resistance versus susceptibility for the configured drug, drug class, or AMR trait. In the pyseer model, case (vancomycin resistant) is coded as 1 and control (vancomycin sensitive) is coded as 0. Confirm that resistant isolates are mapped to the case class and susceptible isolates are mapped to the control class before interpreting candidate markers.
Interpretation issueCurrent workflow/report behaviorRecommended AMR interpretation
Phenotype clarityOne binary phenotype is tested per run using the phenotype TSV supplied to pyseer.For AMR, label the contrast explicitly as phenotypically resistant versus susceptible and verify case/control coding before launch.
Gene presence/absenceThe primary GWAS branch tests pangenome gene-cluster presence/absence with population-structure correction.A resistance gene found in some susceptible isolates may reflect gene inactivity, expression differences, breakpoint issues, linkage, or phenotype error; interpret enrichment rather than presence alone.
Point mutationsPoint mutations are not represented by gene presence/absence; they are assessed only when the optional SNP GWAS branch is enabled.Use do_snp_gwas=true for mutation-mediated resistance, such as many MTBC drug-resistance phenotypes, and interpret SNP hits alongside known resistance catalogs where available.
Species backgroundSpecies labels are recorded as run provenance, but species is not automatically included as a regression covariate in the default model.Avoid pooling divergent species without review. Prefer species-specific or lineage-aware analyses when associations may differ by species.
Sequencing depth and assembly qualityThe workflow generates FASTQ/assembly QC outputs, but read depth and assembly quality are not automatically modeled as covariates.Filter low-depth or poor-quality samples and inspect gene absence in susceptible/resistant groups before making biological claims.
Multiple resistance genes in the same classPrioritized hits are marker-level associations and may be correlated through plasmids, mobile elements, clonal background, or co-carriage.For antibiotic-class interpretation, inspect gene co-occurrence and consider class-level summaries or follow-up multivariable models outside this summary report.
Population structure and linkageMash distances/MDS and population-structure plots are generated to help assess lineage confounding.If resistant and susceptible isolates cluster by lineage or outbreak, treat hits as candidates requiring validation rather than causal resistance determinants.
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02 Workflow architecture

Brief interpretation: Reads are quality-trimmed, assembled, annotated with Bakta, summarized as a Panaroo pangenome, tested with pyseer, and then annotated against the selected reference package.
01
Input
Sample-set validation

Checks sample names, paired FASTQs, group labels, and case (vancomycin resistant)/control (vancomycin sensitive) balance.

02
QC
fastp trimming

Generates cleaned reads plus QC summaries.

03
Assembly
Shovill

Builds de novo genome assemblies using safe Cromwell memory handling.

04
Annotation
Bakta + Panaroo

Creates GFF annotations and pangenome gene matrices. Prokka remains the default; Bakta can be enabled with use_bakta=true.

05
GWAS
Mash + pyseer

Runs population-structure-aware gene and optional SNP association testing.

06
Rescue
GenBank annotation

Maps prioritized pangenome/SNP markers to reference GenBank features where possible.

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03 Run configuration

Brief interpretation: The report records the reference package, species label, annotation engine, GWAS mode, SNP branch, Gubbins status, and container backend so that the run can be audited and repeated.
Reference name
EFAECIUM_2026_06
Species
Enterococcus Faecium
Reference Docker
gmboowa/rmap-gwas-efaecium-refs:2026.06
Generated UTC
2026-07-06T07:48:24Z
Phenotype coding: case (vancomycin resistant) = 1; control (vancomycin sensitive) = 0. GWAS mode: gene_presence_absence_plus_snp; SNP branch: run; Gubbins recombination module: not run; annotation engine: Bakta; container backend recorded as docker.
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04 Top-hit GenBank annotation rescue

Brief interpretation: The top gene hit is a candidate association for the case (vancomycin resistant) versus control (vancomycin sensitive) contrast. Treat it as a hypothesis until supported by sample size, population-structure checks, annotation confidence, and independent validation.
Display name
group_574
Pangenome/SNP marker
group_574
Reference locus / gene
HMPREF0351_RS07175 / not assigned
Confidence
none
Top-hit interpretation: No confident reference gene assignment; report the stable Panaroo cluster ID. Reference identity: 27.75%; reference coverage: 2.60%. Product: glycosyltransferase family 8 protein.
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05 Population structure

Brief interpretation: The PCoA plot suggests the two phenotype groups are relatively mixed by Mash distance (PCoA separation score 0.21; between/within Mash distance ratio 1.06). This reduces, but does not eliminate, concern that associations are driven only by lineage.
Interpretation check: Review case (vancomycin resistant)/control (vancomycin sensitive) clustering before interpreting top hits. Strong phenotype-lineage clustering can indicate lineage-associated markers rather than causal phenotype-associated variation.
Lay interpretation — PCoA: The PCoA plot suggests the two phenotype groups are relatively mixed by Mash distance (PCoA separation score 0.21; between/within Mash distance ratio 1.06). This reduces, but does not eliminate, concern that associations are driven only by lineage.
Population structure: Mash PCoA DRR446252 (control (vancomycin sensitive)) DRR446260 (control (vancomycin sensitive)) DRR446277 (control (vancomycin sensitive)) DRR446278 (control (vancomycin sensitive)) DRR446279 (control (vancomycin sensitive)) DRR446280 (control (vancomycin sensitive)) DRR446284 (control (vancomycin sensitive)) ERR11531054 (control (vancomycin sensitive)) ERR11531108 (control (vancomycin sensitive)) ERR11531112 (control (vancomycin sensitive)) ERR11531170 (control (vancomycin sensitive)) ERR11531176 (control (vancomycin sensitive)) ERR11531195 (control (vancomycin sensitive)) ERR11531200 (control (vancomycin sensitive)) ERR11531201 (control (vancomycin sensitive)) ERR11531203 (control (vancomycin sensitive)) ERR11531204 (control (vancomycin sensitive)) ERR11531219 (control (vancomycin sensitive)) ERR11531244 (control (vancomycin sensitive)) ERR11531245 (control (vancomycin sensitive)) ERR11531248 (control (vancomycin sensitive)) ERR11531249 (control (vancomycin sensitive)) ERR11531326 (control (vancomycin sensitive)) ERR11531340 (control (vancomycin sensitive)) ERR11531347 (control (vancomycin sensitive)) ERR11531393 (control (vancomycin sensitive)) ERR11531429 (control (vancomycin sensitive)) ERR11531460 (control (vancomycin sensitive)) ERR11531461 (control (vancomycin sensitive)) ERR11531465 (control (vancomycin sensitive)) ERR11531471 (control (vancomycin sensitive)) ERR11531473 (control (vancomycin sensitive)) ERR11531495 (control (vancomycin sensitive)) ERR11531497 (control (vancomycin sensitive)) ERR11531516 (control (vancomycin sensitive)) ERR11531554 (control (vancomycin sensitive)) ERR11531582 (control (vancomycin sensitive)) ERR13765590 (case (vancomycin resistant)) ERR13765609 (case (vancomycin resistant)) ERR13765626 (case (vancomycin resistant)) ERR13765629 (case (vancomycin resistant)) ERR13765637 (case (vancomycin resistant)) ERR15563860 (case (vancomycin resistant)) ERR16046165 (case (vancomycin resistant)) ERR16046184 (case (vancomycin resistant)) ERR16046185 (case (vancomycin resistant)) ERR16046223 (case (vancomycin resistant)) ERR16046246 (case (vancomycin resistant)) ERR16046342 (case (vancomycin resistant)) ERR16046348 (case (vancomycin resistant)) ERR16046364 (case (vancomycin resistant)) ERR16046374 (case (vancomycin resistant)) ERR16046383 (case (vancomycin resistant)) ERR16046402 (case (vancomycin resistant)) ERR16046432 (case (vancomycin resistant)) ERR2713035 (control (vancomycin sensitive)) ERR2713039 (control (vancomycin sensitive)) ERR2713040 (control (vancomycin sensitive)) ERR2713043 (control (vancomycin sensitive)) ERR2713062 (control (vancomycin sensitive)) ERR2713082 (control (vancomycin sensitive)) ERR2713083 (control (vancomycin sensitive)) ERR2713095 (control (vancomycin sensitive)) ERR2713104 (control (vancomycin sensitive)) ERR2789853 (control (vancomycin sensitive)) ERR4436576 (control (vancomycin sensitive)) SRR1981646 (control (vancomycin sensitive)) SRR23378191 (case (vancomycin resistant)) SRR23378198 (case (vancomycin resistant)) SRR23378202 (case (vancomycin resistant)) SRR23378204 (case (vancomycin resistant)) SRR23378207 (case (vancomycin resistant)) SRR23378211 (case (vancomycin resistant)) SRR23378212 (case (vancomycin resistant)) SRR23378214 (case (vancomycin resistant)) SRR23378215 (case (vancomycin resistant)) SRR23378217 (case (vancomycin resistant)) SRR23378218 (case (vancomycin resistant)) SRR23378219 (case (vancomycin resistant)) SRR23378222 (case (vancomycin resistant)) SRR23378224 (case (vancomycin resistant)) SRR23378226 (case (vancomycin resistant)) SRR23378229 (case (vancomycin resistant)) SRR23378239 (case (vancomycin resistant)) SRR23378240 (case (vancomycin resistant)) SRR23378241 (case (vancomycin resistant)) SRR23378243 (case (vancomycin resistant)) SRR27099150 (case (vancomycin resistant)) SRR27099166 (case (vancomycin resistant)) SRR33302441 (control (vancomycin sensitive)) SRR33418247 (case (vancomycin resistant)) SRR33468265 (case (vancomycin resistant)) SRR33592340 (case (vancomycin resistant)) SRR33609566 (case (vancomycin resistant)) SRR33657924 (case (vancomycin resistant)) SRR33674433 (case (vancomycin resistant)) SRR34997162 (case (vancomycin resistant)) SRR34997164 (case (vancomycin resistant)) SRR34997165 (case (vancomycin resistant)) SRR34997166 (case (vancomycin resistant)) case (vancomycin resistant) control (vancomycin sensitive) PCoA1 (52.9% variance) PCoA2 (14.5% variance)
Mash distance / kinship matrix DRR446252 vs DRR446252 DRR446252 vs DRR446260 DRR446252 vs DRR446277 DRR446252 vs DRR446278 DRR446252 vs DRR446279 DRR446252 vs DRR446280 DRR446252 vs DRR446284 DRR446252 vs ERR11531054 DRR446252 vs ERR11531108 DRR446252 vs ERR11531112 DRR446252 vs ERR11531170 DRR446252 vs ERR11531176 DRR446252 vs ERR11531195 DRR446252 vs ERR11531200 DRR446252 vs ERR11531201 DRR446252 vs ERR11531203 DRR446252 vs ERR11531204 DRR446252 vs ERR11531219 DRR446252 vs ERR11531244 DRR446252 vs ERR11531245 DRR446252 vs ERR11531248 DRR446252 vs ERR11531249 DRR446252 vs ERR11531326 DRR446252 vs ERR11531340 DRR446252 vs ERR11531347 DRR446252 vs ERR11531393 DRR446252 vs ERR11531429 DRR446252 vs ERR11531460 DRR446252 vs ERR11531461 DRR446252 vs ERR11531465 DRR446252 vs ERR11531471 DRR446252 vs ERR11531473 DRR446252 vs ERR11531495 DRR446252 vs ERR11531497 DRR446252 vs ERR11531516 DRR446252 vs ERR11531554 DRR446252 vs ERR11531582 DRR446252 vs ERR2713035 DRR446252 vs ERR2713039 DRR446252 vs ERR2713040 DRR446252 vs ERR2713043 DRR446252 vs ERR2713062 DRR446252 vs ERR2713082 DRR446252 vs ERR2713083 DRR446252 vs ERR2713095 DRR446252 vs ERR2713104 DRR446252 vs ERR2789853 DRR446252 vs ERR4436576 DRR446252 vs SRR1981646 DRR446252 vs SRR33302441 DRR446252 vs ERR13765590 DRR446252 vs ERR13765609 DRR446252 vs ERR13765626 DRR446252 vs ERR13765629 DRR446252 vs ERR13765637 DRR446252 vs ERR15563860 DRR446252 vs ERR16046165 DRR446252 vs ERR16046184 DRR446252 vs ERR16046185 DRR446252 vs ERR16046223 DRR446252 vs ERR16046246 DRR446252 vs ERR16046342 DRR446252 vs ERR16046348 DRR446252 vs ERR16046364 DRR446252 vs ERR16046374 DRR446252 vs ERR16046383 DRR446252 vs ERR16046402 DRR446252 vs ERR16046432 DRR446252 vs SRR23378191 DRR446252 vs SRR23378198 DRR446252 vs SRR23378202 DRR446252 vs SRR23378204 DRR446252 vs SRR23378207 DRR446252 vs SRR23378211 DRR446252 vs SRR23378212 DRR446252 vs SRR23378214 DRR446252 vs SRR23378215 DRR446252 vs SRR23378217 DRR446252 vs SRR23378218 DRR446252 vs SRR23378219 DRR446252 vs SRR23378222 DRR446252 vs SRR23378224 DRR446252 vs SRR23378226 DRR446252 vs SRR23378229 DRR446252 vs SRR23378239 DRR446252 vs SRR23378240 DRR446252 vs SRR23378241 DRR446252 vs SRR23378243 DRR446252 vs SRR27099150 DRR446252 vs SRR27099166 DRR446252 vs SRR33418247 DRR446252 vs SRR33468265 DRR446252 vs SRR33592340 DRR446252 vs SRR33609566 DRR446252 vs SRR33657924 DRR446252 vs SRR33674433 DRR446252 vs SRR34997162 DRR446252 vs SRR34997164 DRR446252 vs SRR34997165 DRR446252 vs SRR34997166 DRR446260 vs DRR446252 DRR446260 vs DRR446260 DRR446260 vs DRR446277 DRR446260 vs DRR446278 DRR446260 vs DRR446279 DRR446260 vs DRR446280 DRR446260 vs DRR446284 DRR446260 vs ERR11531054 DRR446260 vs ERR11531108 DRR446260 vs ERR11531112 DRR446260 vs ERR11531170 DRR446260 vs ERR11531176 DRR446260 vs ERR11531195 DRR446260 vs ERR11531200 DRR446260 vs ERR11531201 DRR446260 vs ERR11531203 DRR446260 vs ERR11531204 DRR446260 vs ERR11531219 DRR446260 vs ERR11531244 DRR446260 vs ERR11531245 DRR446260 vs ERR11531248 DRR446260 vs ERR11531249 DRR446260 vs ERR11531326 DRR446260 vs ERR11531340 DRR446260 vs ERR11531347 DRR446260 vs ERR11531393 DRR446260 vs ERR11531429 DRR446260 vs ERR11531460 DRR446260 vs ERR11531461 DRR446260 vs ERR11531465 DRR446260 vs ERR11531471 DRR446260 vs ERR11531473 DRR446260 vs ERR11531495 DRR446260 vs ERR11531497 DRR446260 vs ERR11531516 DRR446260 vs ERR11531554 DRR446260 vs ERR11531582 DRR446260 vs ERR2713035 DRR446260 vs ERR2713039 DRR446260 vs ERR2713040 DRR446260 vs ERR2713043 DRR446260 vs ERR2713062 DRR446260 vs ERR2713082 DRR446260 vs ERR2713083 DRR446260 vs ERR2713095 DRR446260 vs ERR2713104 DRR446260 vs ERR2789853 DRR446260 vs ERR4436576 DRR446260 vs SRR1981646 DRR446260 vs SRR33302441 DRR446260 vs ERR13765590 DRR446260 vs ERR13765609 DRR446260 vs ERR13765626 DRR446260 vs ERR13765629 DRR446260 vs ERR13765637 DRR446260 vs ERR15563860 DRR446260 vs ERR16046165 DRR446260 vs ERR16046184 DRR446260 vs ERR16046185 DRR446260 vs ERR16046223 DRR446260 vs ERR16046246 DRR446260 vs ERR16046342 DRR446260 vs ERR16046348 DRR446260 vs ERR16046364 DRR446260 vs ERR16046374 DRR446260 vs ERR16046383 DRR446260 vs ERR16046402 DRR446260 vs ERR16046432 DRR446260 vs SRR23378191 DRR446260 vs SRR23378198 DRR446260 vs SRR23378202 DRR446260 vs SRR23378204 DRR446260 vs SRR23378207 DRR446260 vs SRR23378211 DRR446260 vs SRR23378212 DRR446260 vs SRR23378214 DRR446260 vs SRR23378215 DRR446260 vs SRR23378217 DRR446260 vs SRR23378218 DRR446260 vs SRR23378219 DRR446260 vs SRR23378222 DRR446260 vs SRR23378224 DRR446260 vs SRR23378226 DRR446260 vs SRR23378229 DRR446260 vs SRR23378239 DRR446260 vs SRR23378240 DRR446260 vs SRR23378241 DRR446260 vs SRR23378243 DRR446260 vs SRR27099150 DRR446260 vs SRR27099166 DRR446260 vs SRR33418247 DRR446260 vs SRR33468265 DRR446260 vs SRR33592340 DRR446260 vs SRR33609566 DRR446260 vs SRR33657924 DRR446260 vs SRR33674433 DRR446260 vs SRR34997162 DRR446260 vs SRR34997164 DRR446260 vs SRR34997165 DRR446260 vs SRR34997166 DRR446277 vs DRR446252 DRR446277 vs DRR446260 DRR446277 vs DRR446277 DRR446277 vs DRR446278 DRR446277 vs DRR446279 DRR446277 vs DRR446280 DRR446277 vs DRR446284 DRR446277 vs ERR11531054 DRR446277 vs ERR11531108 DRR446277 vs ERR11531112 DRR446277 vs ERR11531170 DRR446277 vs ERR11531176 DRR446277 vs ERR11531195 DRR446277 vs ERR11531200 DRR446277 vs ERR11531201 DRR446277 vs ERR11531203 DRR446277 vs ERR11531204 DRR446277 vs ERR11531219 DRR446277 vs ERR11531244 DRR446277 vs ERR11531245 DRR446277 vs ERR11531248 DRR446277 vs ERR11531249 DRR446277 vs ERR11531326 DRR446277 vs ERR11531340 DRR446277 vs ERR11531347 DRR446277 vs ERR11531393 DRR446277 vs ERR11531429 DRR446277 vs ERR11531460 DRR446277 vs ERR11531461 DRR446277 vs ERR11531465 DRR446277 vs ERR11531471 DRR446277 vs ERR11531473 DRR446277 vs ERR11531495 DRR446277 vs ERR11531497 DRR446277 vs ERR11531516 DRR446277 vs ERR11531554 DRR446277 vs ERR11531582 DRR446277 vs ERR2713035 DRR446277 vs ERR2713039 DRR446277 vs ERR2713040 DRR446277 vs ERR2713043 DRR446277 vs ERR2713062 DRR446277 vs ERR2713082 DRR446277 vs ERR2713083 DRR446277 vs ERR2713095 DRR446277 vs ERR2713104 DRR446277 vs ERR2789853 DRR446277 vs ERR4436576 DRR446277 vs SRR1981646 DRR446277 vs SRR33302441 DRR446277 vs ERR13765590 DRR446277 vs ERR13765609 DRR446277 vs ERR13765626 DRR446277 vs ERR13765629 DRR446277 vs ERR13765637 DRR446277 vs ERR15563860 DRR446277 vs ERR16046165 DRR446277 vs ERR16046184 DRR446277 vs ERR16046185 DRR446277 vs ERR16046223 DRR446277 vs ERR16046246 DRR446277 vs ERR16046342 DRR446277 vs ERR16046348 DRR446277 vs ERR16046364 DRR446277 vs ERR16046374 DRR446277 vs ERR16046383 DRR446277 vs ERR16046402 DRR446277 vs ERR16046432 DRR446277 vs SRR23378191 DRR446277 vs SRR23378198 DRR446277 vs SRR23378202 DRR446277 vs SRR23378204 DRR446277 vs SRR23378207 DRR446277 vs SRR23378211 DRR446277 vs SRR23378212 DRR446277 vs SRR23378214 DRR446277 vs SRR23378215 DRR446277 vs SRR23378217 DRR446277 vs SRR23378218 DRR446277 vs SRR23378219 DRR446277 vs SRR23378222 DRR446277 vs SRR23378224 DRR446277 vs SRR23378226 DRR446277 vs SRR23378229 DRR446277 vs SRR23378239 DRR446277 vs SRR23378240 DRR446277 vs SRR23378241 DRR446277 vs SRR23378243 DRR446277 vs SRR27099150 DRR446277 vs SRR27099166 DRR446277 vs SRR33418247 DRR446277 vs SRR33468265 DRR446277 vs SRR33592340 DRR446277 vs SRR33609566 DRR446277 vs SRR33657924 DRR446277 vs SRR33674433 DRR446277 vs SRR34997162 DRR446277 vs SRR34997164 DRR446277 vs SRR34997165 DRR446277 vs SRR34997166 DRR446278 vs DRR446252 DRR446278 vs DRR446260 DRR446278 vs DRR446277 DRR446278 vs DRR446278 DRR446278 vs DRR446279 DRR446278 vs DRR446280 DRR446278 vs DRR446284 DRR446278 vs ERR11531054 DRR446278 vs ERR11531108 DRR446278 vs ERR11531112 DRR446278 vs ERR11531170 DRR446278 vs ERR11531176 DRR446278 vs ERR11531195 DRR446278 vs ERR11531200 DRR446278 vs ERR11531201 DRR446278 vs ERR11531203 DRR446278 vs ERR11531204 DRR446278 vs ERR11531219 DRR446278 vs ERR11531244 DRR446278 vs ERR11531245 DRR446278 vs ERR11531248 DRR446278 vs ERR11531249 DRR446278 vs ERR11531326 DRR446278 vs ERR11531340 DRR446278 vs ERR11531347 DRR446278 vs ERR11531393 DRR446278 vs ERR11531429 DRR446278 vs ERR11531460 DRR446278 vs ERR11531461 DRR446278 vs ERR11531465 DRR446278 vs ERR11531471 DRR446278 vs ERR11531473 DRR446278 vs ERR11531495 DRR446278 vs ERR11531497 DRR446278 vs ERR11531516 DRR446278 vs ERR11531554 DRR446278 vs ERR11531582 DRR446278 vs ERR2713035 DRR446278 vs ERR2713039 DRR446278 vs ERR2713040 DRR446278 vs ERR2713043 DRR446278 vs ERR2713062 DRR446278 vs ERR2713082 DRR446278 vs ERR2713083 DRR446278 vs ERR2713095 DRR446278 vs ERR2713104 DRR446278 vs ERR2789853 DRR446278 vs ERR4436576 DRR446278 vs SRR1981646 DRR446278 vs SRR33302441 DRR446278 vs ERR13765590 DRR446278 vs ERR13765609 DRR446278 vs ERR13765626 DRR446278 vs ERR13765629 DRR446278 vs ERR13765637 DRR446278 vs ERR15563860 DRR446278 vs ERR16046165 DRR446278 vs ERR16046184 DRR446278 vs ERR16046185 DRR446278 vs ERR16046223 DRR446278 vs ERR16046246 DRR446278 vs ERR16046342 DRR446278 vs ERR16046348 DRR446278 vs ERR16046364 DRR446278 vs ERR16046374 DRR446278 vs ERR16046383 DRR446278 vs ERR16046402 DRR446278 vs ERR16046432 DRR446278 vs SRR23378191 DRR446278 vs SRR23378198 DRR446278 vs SRR23378202 DRR446278 vs SRR23378204 DRR446278 vs SRR23378207 DRR446278 vs SRR23378211 DRR446278 vs SRR23378212 DRR446278 vs SRR23378214 DRR446278 vs SRR23378215 DRR446278 vs SRR23378217 DRR446278 vs SRR23378218 DRR446278 vs SRR23378219 DRR446278 vs SRR23378222 DRR446278 vs SRR23378224 DRR446278 vs SRR23378226 DRR446278 vs SRR23378229 DRR446278 vs SRR23378239 DRR446278 vs SRR23378240 DRR446278 vs SRR23378241 DRR446278 vs SRR23378243 DRR446278 vs SRR27099150 DRR446278 vs SRR27099166 DRR446278 vs SRR33418247 DRR446278 vs SRR33468265 DRR446278 vs SRR33592340 DRR446278 vs SRR33609566 DRR446278 vs SRR33657924 DRR446278 vs SRR33674433 DRR446278 vs SRR34997162 DRR446278 vs SRR34997164 DRR446278 vs SRR34997165 DRR446278 vs SRR34997166 DRR446279 vs DRR446252 DRR446279 vs DRR446260 DRR446279 vs DRR446277 DRR446279 vs DRR446278 DRR446279 vs DRR446279 DRR446279 vs DRR446280 DRR446279 vs DRR446284 DRR446279 vs ERR11531054 DRR446279 vs ERR11531108 DRR446279 vs ERR11531112 DRR446279 vs ERR11531170 DRR446279 vs ERR11531176 DRR446279 vs ERR11531195 DRR446279 vs ERR11531200 DRR446279 vs ERR11531201 DRR446279 vs ERR11531203 DRR446279 vs ERR11531204 DRR446279 vs ERR11531219 DRR446279 vs ERR11531244 DRR446279 vs ERR11531245 DRR446279 vs ERR11531248 DRR446279 vs ERR11531249 DRR446279 vs ERR11531326 DRR446279 vs ERR11531340 DRR446279 vs ERR11531347 DRR446279 vs ERR11531393 DRR446279 vs ERR11531429 DRR446279 vs ERR11531460 DRR446279 vs ERR11531461 DRR446279 vs ERR11531465 DRR446279 vs ERR11531471 DRR446279 vs ERR11531473 DRR446279 vs ERR11531495 DRR446279 vs ERR11531497 DRR446279 vs ERR11531516 DRR446279 vs ERR11531554 DRR446279 vs ERR11531582 DRR446279 vs ERR2713035 DRR446279 vs ERR2713039 DRR446279 vs ERR2713040 DRR446279 vs ERR2713043 DRR446279 vs ERR2713062 DRR446279 vs ERR2713082 DRR446279 vs ERR2713083 DRR446279 vs ERR2713095 DRR446279 vs ERR2713104 DRR446279 vs ERR2789853 DRR446279 vs ERR4436576 DRR446279 vs SRR1981646 DRR446279 vs SRR33302441 DRR446279 vs ERR13765590 DRR446279 vs ERR13765609 DRR446279 vs ERR13765626 DRR446279 vs ERR13765629 DRR446279 vs ERR13765637 DRR446279 vs ERR15563860 DRR446279 vs ERR16046165 DRR446279 vs ERR16046184 DRR446279 vs ERR16046185 DRR446279 vs ERR16046223 DRR446279 vs ERR16046246 DRR446279 vs ERR16046342 DRR446279 vs ERR16046348 DRR446279 vs ERR16046364 DRR446279 vs ERR16046374 DRR446279 vs ERR16046383 DRR446279 vs ERR16046402 DRR446279 vs ERR16046432 DRR446279 vs SRR23378191 DRR446279 vs SRR23378198 DRR446279 vs SRR23378202 DRR446279 vs SRR23378204 DRR446279 vs SRR23378207 DRR446279 vs SRR23378211 DRR446279 vs SRR23378212 DRR446279 vs SRR23378214 DRR446279 vs SRR23378215 DRR446279 vs SRR23378217 DRR446279 vs SRR23378218 DRR446279 vs SRR23378219 DRR446279 vs SRR23378222 DRR446279 vs SRR23378224 DRR446279 vs SRR23378226 DRR446279 vs SRR23378229 DRR446279 vs SRR23378239 DRR446279 vs SRR23378240 DRR446279 vs SRR23378241 DRR446279 vs SRR23378243 DRR446279 vs SRR27099150 DRR446279 vs SRR27099166 DRR446279 vs SRR33418247 DRR446279 vs SRR33468265 DRR446279 vs SRR33592340 DRR446279 vs SRR33609566 DRR446279 vs SRR33657924 DRR446279 vs SRR33674433 DRR446279 vs SRR34997162 DRR446279 vs SRR34997164 DRR446279 vs SRR34997165 DRR446279 vs SRR34997166 DRR446280 vs DRR446252 DRR446280 vs DRR446260 DRR446280 vs DRR446277 DRR446280 vs DRR446278 DRR446280 vs DRR446279 DRR446280 vs DRR446280 DRR446280 vs DRR446284 DRR446280 vs ERR11531054 DRR446280 vs ERR11531108 DRR446280 vs ERR11531112 DRR446280 vs ERR11531170 DRR446280 vs ERR11531176 DRR446280 vs ERR11531195 DRR446280 vs ERR11531200 DRR446280 vs ERR11531201 DRR446280 vs ERR11531203 DRR446280 vs ERR11531204 DRR446280 vs ERR11531219 DRR446280 vs ERR11531244 DRR446280 vs ERR11531245 DRR446280 vs ERR11531248 DRR446280 vs ERR11531249 DRR446280 vs ERR11531326 DRR446280 vs ERR11531340 DRR446280 vs ERR11531347 DRR446280 vs ERR11531393 DRR446280 vs ERR11531429 DRR446280 vs ERR11531460 DRR446280 vs ERR11531461 DRR446280 vs ERR11531465 DRR446280 vs ERR11531471 DRR446280 vs ERR11531473 DRR446280 vs ERR11531495 DRR446280 vs ERR11531497 DRR446280 vs ERR11531516 DRR446280 vs ERR11531554 DRR446280 vs ERR11531582 DRR446280 vs ERR2713035 DRR446280 vs ERR2713039 DRR446280 vs ERR2713040 DRR446280 vs ERR2713043 DRR446280 vs ERR2713062 DRR446280 vs ERR2713082 DRR446280 vs ERR2713083 DRR446280 vs ERR2713095 DRR446280 vs ERR2713104 DRR446280 vs ERR2789853 DRR446280 vs ERR4436576 DRR446280 vs SRR1981646 DRR446280 vs SRR33302441 DRR446280 vs ERR13765590 DRR446280 vs ERR13765609 DRR446280 vs ERR13765626 DRR446280 vs ERR13765629 DRR446280 vs ERR13765637 DRR446280 vs ERR15563860 DRR446280 vs ERR16046165 DRR446280 vs ERR16046184 DRR446280 vs ERR16046185 DRR446280 vs ERR16046223 DRR446280 vs ERR16046246 DRR446280 vs ERR16046342 DRR446280 vs ERR16046348 DRR446280 vs ERR16046364 DRR446280 vs ERR16046374 DRR446280 vs ERR16046383 DRR446280 vs ERR16046402 DRR446280 vs ERR16046432 DRR446280 vs SRR23378191 DRR446280 vs SRR23378198 DRR446280 vs SRR23378202 DRR446280 vs SRR23378204 DRR446280 vs SRR23378207 DRR446280 vs SRR23378211 DRR446280 vs SRR23378212 DRR446280 vs SRR23378214 DRR446280 vs SRR23378215 DRR446280 vs SRR23378217 DRR446280 vs SRR23378218 DRR446280 vs SRR23378219 DRR446280 vs SRR23378222 DRR446280 vs SRR23378224 DRR446280 vs SRR23378226 DRR446280 vs SRR23378229 DRR446280 vs SRR23378239 DRR446280 vs SRR23378240 DRR446280 vs SRR23378241 DRR446280 vs SRR23378243 DRR446280 vs SRR27099150 DRR446280 vs SRR27099166 DRR446280 vs SRR33418247 DRR446280 vs SRR33468265 DRR446280 vs SRR33592340 DRR446280 vs SRR33609566 DRR446280 vs SRR33657924 DRR446280 vs SRR33674433 DRR446280 vs SRR34997162 DRR446280 vs SRR34997164 DRR446280 vs SRR34997165 DRR446280 vs SRR34997166 DRR446284 vs DRR446252 DRR446284 vs DRR446260 DRR446284 vs DRR446277 DRR446284 vs DRR446278 DRR446284 vs DRR446279 DRR446284 vs DRR446280 DRR446284 vs DRR446284 DRR446284 vs ERR11531054 DRR446284 vs ERR11531108 DRR446284 vs ERR11531112 DRR446284 vs ERR11531170 DRR446284 vs ERR11531176 DRR446284 vs ERR11531195 DRR446284 vs ERR11531200 DRR446284 vs ERR11531201 DRR446284 vs ERR11531203 DRR446284 vs ERR11531204 DRR446284 vs ERR11531219 DRR446284 vs ERR11531244 DRR446284 vs ERR11531245 DRR446284 vs ERR11531248 DRR446284 vs ERR11531249 DRR446284 vs ERR11531326 DRR446284 vs ERR11531340 DRR446284 vs ERR11531347 DRR446284 vs ERR11531393 DRR446284 vs ERR11531429 DRR446284 vs ERR11531460 DRR446284 vs ERR11531461 DRR446284 vs ERR11531465 DRR446284 vs ERR11531471 DRR446284 vs ERR11531473 DRR446284 vs ERR11531495 DRR446284 vs ERR11531497 DRR446284 vs ERR11531516 DRR446284 vs ERR11531554 DRR446284 vs ERR11531582 DRR446284 vs ERR2713035 DRR446284 vs ERR2713039 DRR446284 vs ERR2713040 DRR446284 vs ERR2713043 DRR446284 vs ERR2713062 DRR446284 vs ERR2713082 DRR446284 vs ERR2713083 DRR446284 vs ERR2713095 DRR446284 vs ERR2713104 DRR446284 vs ERR2789853 DRR446284 vs ERR4436576 DRR446284 vs SRR1981646 DRR446284 vs SRR33302441 DRR446284 vs ERR13765590 DRR446284 vs ERR13765609 DRR446284 vs ERR13765626 DRR446284 vs ERR13765629 DRR446284 vs ERR13765637 DRR446284 vs ERR15563860 DRR446284 vs ERR16046165 DRR446284 vs ERR16046184 DRR446284 vs ERR16046185 DRR446284 vs ERR16046223 DRR446284 vs ERR16046246 DRR446284 vs ERR16046342 DRR446284 vs ERR16046348 DRR446284 vs ERR16046364 DRR446284 vs ERR16046374 DRR446284 vs ERR16046383 DRR446284 vs ERR16046402 DRR446284 vs ERR16046432 DRR446284 vs SRR23378191 DRR446284 vs SRR23378198 DRR446284 vs SRR23378202 DRR446284 vs SRR23378204 DRR446284 vs SRR23378207 DRR446284 vs SRR23378211 DRR446284 vs SRR23378212 DRR446284 vs SRR23378214 DRR446284 vs SRR23378215 DRR446284 vs SRR23378217 DRR446284 vs SRR23378218 DRR446284 vs SRR23378219 DRR446284 vs SRR23378222 DRR446284 vs SRR23378224 DRR446284 vs SRR23378226 DRR446284 vs SRR23378229 DRR446284 vs SRR23378239 DRR446284 vs SRR23378240 DRR446284 vs SRR23378241 DRR446284 vs SRR23378243 DRR446284 vs SRR27099150 DRR446284 vs SRR27099166 DRR446284 vs SRR33418247 DRR446284 vs SRR33468265 DRR446284 vs SRR33592340 DRR446284 vs SRR33609566 DRR446284 vs SRR33657924 DRR446284 vs SRR33674433 DRR446284 vs SRR34997162 DRR446284 vs SRR34997164 DRR446284 vs SRR34997165 DRR446284 vs SRR34997166 ERR11531054 vs DRR446252 ERR11531054 vs DRR446260 ERR11531054 vs DRR446277 ERR11531054 vs DRR446278 ERR11531054 vs DRR446279 ERR11531054 vs DRR446280 ERR11531054 vs DRR446284 ERR11531054 vs ERR11531054 ERR11531054 vs ERR11531108 ERR11531054 vs ERR11531112 ERR11531054 vs ERR11531170 ERR11531054 vs ERR11531176 ERR11531054 vs ERR11531195 ERR11531054 vs ERR11531200 ERR11531054 vs ERR11531201 ERR11531054 vs ERR11531203 ERR11531054 vs ERR11531204 ERR11531054 vs ERR11531219 ERR11531054 vs ERR11531244 ERR11531054 vs ERR11531245 ERR11531054 vs ERR11531248 ERR11531054 vs ERR11531249 ERR11531054 vs ERR11531326 ERR11531054 vs ERR11531340 ERR11531054 vs ERR11531347 ERR11531054 vs ERR11531393 ERR11531054 vs ERR11531429 ERR11531054 vs ERR11531460 ERR11531054 vs ERR11531461 ERR11531054 vs ERR11531465 ERR11531054 vs ERR11531471 ERR11531054 vs ERR11531473 ERR11531054 vs ERR11531495 ERR11531054 vs ERR11531497 ERR11531054 vs ERR11531516 ERR11531054 vs ERR11531554 ERR11531054 vs ERR11531582 ERR11531054 vs ERR2713035 ERR11531054 vs ERR2713039 ERR11531054 vs ERR2713040 ERR11531054 vs ERR2713043 ERR11531054 vs ERR2713062 ERR11531054 vs ERR2713082 ERR11531054 vs ERR2713083 ERR11531054 vs ERR2713095 ERR11531054 vs ERR2713104 ERR11531054 vs ERR2789853 ERR11531054 vs ERR4436576 ERR11531054 vs SRR1981646 ERR11531054 vs SRR33302441 ERR11531054 vs ERR13765590 ERR11531054 vs ERR13765609 ERR11531054 vs ERR13765626 ERR11531054 vs ERR13765629 ERR11531054 vs ERR13765637 ERR11531054 vs ERR15563860 ERR11531054 vs ERR16046165 ERR11531054 vs ERR16046184 ERR11531054 vs ERR16046185 ERR11531054 vs ERR16046223 ERR11531054 vs ERR16046246 ERR11531054 vs ERR16046342 ERR11531054 vs ERR16046348 ERR11531054 vs ERR16046364 ERR11531054 vs ERR16046374 ERR11531054 vs ERR16046383 ERR11531054 vs ERR16046402 ERR11531054 vs ERR16046432 ERR11531054 vs SRR23378191 ERR11531054 vs SRR23378198 ERR11531054 vs SRR23378202 ERR11531054 vs SRR23378204 ERR11531054 vs SRR23378207 ERR11531054 vs SRR23378211 ERR11531054 vs SRR23378212 ERR11531054 vs SRR23378214 ERR11531054 vs SRR23378215 ERR11531054 vs SRR23378217 ERR11531054 vs SRR23378218 ERR11531054 vs SRR23378219 ERR11531054 vs SRR23378222 ERR11531054 vs SRR23378224 ERR11531054 vs SRR23378226 ERR11531054 vs SRR23378229 ERR11531054 vs SRR23378239 ERR11531054 vs SRR23378240 ERR11531054 vs SRR23378241 ERR11531054 vs SRR23378243 ERR11531054 vs SRR27099150 ERR11531054 vs SRR27099166 ERR11531054 vs SRR33418247 ERR11531054 vs SRR33468265 ERR11531054 vs SRR33592340 ERR11531054 vs SRR33609566 ERR11531054 vs SRR33657924 ERR11531054 vs SRR33674433 ERR11531054 vs SRR34997162 ERR11531054 vs SRR34997164 ERR11531054 vs SRR34997165 ERR11531054 vs SRR34997166 ERR11531108 vs DRR446252 ERR11531108 vs DRR446260 ERR11531108 vs DRR446277 ERR11531108 vs DRR446278 ERR11531108 vs DRR446279 ERR11531108 vs DRR446280 ERR11531108 vs DRR446284 ERR11531108 vs ERR11531054 ERR11531108 vs ERR11531108 ERR11531108 vs ERR11531112 ERR11531108 vs ERR11531170 ERR11531108 vs ERR11531176 ERR11531108 vs ERR11531195 ERR11531108 vs ERR11531200 ERR11531108 vs ERR11531201 ERR11531108 vs ERR11531203 ERR11531108 vs ERR11531204 ERR11531108 vs ERR11531219 ERR11531108 vs ERR11531244 ERR11531108 vs ERR11531245 ERR11531108 vs ERR11531248 ERR11531108 vs ERR11531249 ERR11531108 vs ERR11531326 ERR11531108 vs ERR11531340 ERR11531108 vs ERR11531347 ERR11531108 vs ERR11531393 ERR11531108 vs ERR11531429 ERR11531108 vs ERR11531460 ERR11531108 vs ERR11531461 ERR11531108 vs ERR11531465 ERR11531108 vs ERR11531471 ERR11531108 vs ERR11531473 ERR11531108 vs ERR11531495 ERR11531108 vs ERR11531497 ERR11531108 vs ERR11531516 ERR11531108 vs ERR11531554 ERR11531108 vs ERR11531582 ERR11531108 vs ERR2713035 ERR11531108 vs ERR2713039 ERR11531108 vs ERR2713040 ERR11531108 vs ERR2713043 ERR11531108 vs ERR2713062 ERR11531108 vs ERR2713082 ERR11531108 vs ERR2713083 ERR11531108 vs ERR2713095 ERR11531108 vs ERR2713104 ERR11531108 vs ERR2789853 ERR11531108 vs ERR4436576 ERR11531108 vs SRR1981646 ERR11531108 vs SRR33302441 ERR11531108 vs ERR13765590 ERR11531108 vs ERR13765609 ERR11531108 vs ERR13765626 ERR11531108 vs ERR13765629 ERR11531108 vs ERR13765637 ERR11531108 vs ERR15563860 ERR11531108 vs ERR16046165 ERR11531108 vs ERR16046184 ERR11531108 vs ERR16046185 ERR11531108 vs ERR16046223 ERR11531108 vs ERR16046246 ERR11531108 vs ERR16046342 ERR11531108 vs ERR16046348 ERR11531108 vs ERR16046364 ERR11531108 vs ERR16046374 ERR11531108 vs ERR16046383 ERR11531108 vs ERR16046402 ERR11531108 vs ERR16046432 ERR11531108 vs SRR23378191 ERR11531108 vs SRR23378198 ERR11531108 vs SRR23378202 ERR11531108 vs SRR23378204 ERR11531108 vs SRR23378207 ERR11531108 vs SRR23378211 ERR11531108 vs SRR23378212 ERR11531108 vs SRR23378214 ERR11531108 vs SRR23378215 ERR11531108 vs SRR23378217 ERR11531108 vs SRR23378218 ERR11531108 vs SRR23378219 ERR11531108 vs SRR23378222 ERR11531108 vs SRR23378224 ERR11531108 vs SRR23378226 ERR11531108 vs SRR23378229 ERR11531108 vs SRR23378239 ERR11531108 vs SRR23378240 ERR11531108 vs SRR23378241 ERR11531108 vs SRR23378243 ERR11531108 vs SRR27099150 ERR11531108 vs SRR27099166 ERR11531108 vs SRR33418247 ERR11531108 vs SRR33468265 ERR11531108 vs SRR33592340 ERR11531108 vs SRR33609566 ERR11531108 vs SRR33657924 ERR11531108 vs SRR33674433 ERR11531108 vs SRR34997162 ERR11531108 vs SRR34997164 ERR11531108 vs SRR34997165 ERR11531108 vs SRR34997166 ERR11531112 vs DRR446252 ERR11531112 vs DRR446260 ERR11531112 vs DRR446277 ERR11531112 vs DRR446278 ERR11531112 vs DRR446279 ERR11531112 vs DRR446280 ERR11531112 vs DRR446284 ERR11531112 vs ERR11531054 ERR11531112 vs ERR11531108 ERR11531112 vs ERR11531112 ERR11531112 vs ERR11531170 ERR11531112 vs ERR11531176 ERR11531112 vs ERR11531195 ERR11531112 vs ERR11531200 ERR11531112 vs ERR11531201 ERR11531112 vs ERR11531203 ERR11531112 vs ERR11531204 ERR11531112 vs ERR11531219 ERR11531112 vs ERR11531244 ERR11531112 vs ERR11531245 ERR11531112 vs ERR11531248 ERR11531112 vs ERR11531249 ERR11531112 vs ERR11531326 ERR11531112 vs ERR11531340 ERR11531112 vs ERR11531347 ERR11531112 vs ERR11531393 ERR11531112 vs ERR11531429 ERR11531112 vs ERR11531460 ERR11531112 vs ERR11531461 ERR11531112 vs ERR11531465 ERR11531112 vs ERR11531471 ERR11531112 vs ERR11531473 ERR11531112 vs ERR11531495 ERR11531112 vs ERR11531497 ERR11531112 vs ERR11531516 ERR11531112 vs ERR11531554 ERR11531112 vs ERR11531582 ERR11531112 vs ERR2713035 ERR11531112 vs ERR2713039 ERR11531112 vs ERR2713040 ERR11531112 vs ERR2713043 ERR11531112 vs ERR2713062 ERR11531112 vs ERR2713082 ERR11531112 vs ERR2713083 ERR11531112 vs ERR2713095 ERR11531112 vs ERR2713104 ERR11531112 vs ERR2789853 ERR11531112 vs ERR4436576 ERR11531112 vs SRR1981646 ERR11531112 vs SRR33302441 ERR11531112 vs ERR13765590 ERR11531112 vs ERR13765609 ERR11531112 vs ERR13765626 ERR11531112 vs ERR13765629 ERR11531112 vs ERR13765637 ERR11531112 vs ERR15563860 ERR11531112 vs ERR16046165 ERR11531112 vs ERR16046184 ERR11531112 vs ERR16046185 ERR11531112 vs ERR16046223 ERR11531112 vs ERR16046246 ERR11531112 vs ERR16046342 ERR11531112 vs ERR16046348 ERR11531112 vs ERR16046364 ERR11531112 vs ERR16046374 ERR11531112 vs ERR16046383 ERR11531112 vs ERR16046402 ERR11531112 vs ERR16046432 ERR11531112 vs SRR23378191 ERR11531112 vs SRR23378198 ERR11531112 vs SRR23378202 ERR11531112 vs SRR23378204 ERR11531112 vs SRR23378207 ERR11531112 vs SRR23378211 ERR11531112 vs SRR23378212 ERR11531112 vs SRR23378214 ERR11531112 vs SRR23378215 ERR11531112 vs SRR23378217 ERR11531112 vs SRR23378218 ERR11531112 vs SRR23378219 ERR11531112 vs SRR23378222 ERR11531112 vs SRR23378224 ERR11531112 vs SRR23378226 ERR11531112 vs SRR23378229 ERR11531112 vs SRR23378239 ERR11531112 vs SRR23378240 ERR11531112 vs SRR23378241 ERR11531112 vs SRR23378243 ERR11531112 vs SRR27099150 ERR11531112 vs SRR27099166 ERR11531112 vs SRR33418247 ERR11531112 vs SRR33468265 ERR11531112 vs SRR33592340 ERR11531112 vs SRR33609566 ERR11531112 vs SRR33657924 ERR11531112 vs SRR33674433 ERR11531112 vs SRR34997162 ERR11531112 vs SRR34997164 ERR11531112 vs SRR34997165 ERR11531112 vs SRR34997166 ERR11531170 vs DRR446252 ERR11531170 vs DRR446260 ERR11531170 vs DRR446277 ERR11531170 vs DRR446278 ERR11531170 vs DRR446279 ERR11531170 vs DRR446280 ERR11531170 vs DRR446284 ERR11531170 vs ERR11531054 ERR11531170 vs ERR11531108 ERR11531170 vs ERR11531112 ERR11531170 vs ERR11531170 ERR11531170 vs ERR11531176 ERR11531170 vs ERR11531195 ERR11531170 vs ERR11531200 ERR11531170 vs ERR11531201 ERR11531170 vs ERR11531203 ERR11531170 vs ERR11531204 ERR11531170 vs ERR11531219 ERR11531170 vs ERR11531244 ERR11531170 vs ERR11531245 ERR11531170 vs ERR11531248 ERR11531170 vs ERR11531249 ERR11531170 vs ERR11531326 ERR11531170 vs ERR11531340 ERR11531170 vs ERR11531347 ERR11531170 vs ERR11531393 ERR11531170 vs ERR11531429 ERR11531170 vs ERR11531460 ERR11531170 vs ERR11531461 ERR11531170 vs ERR11531465 ERR11531170 vs ERR11531471 ERR11531170 vs ERR11531473 ERR11531170 vs ERR11531495 ERR11531170 vs ERR11531497 ERR11531170 vs ERR11531516 ERR11531170 vs ERR11531554 ERR11531170 vs ERR11531582 ERR11531170 vs ERR2713035 ERR11531170 vs ERR2713039 ERR11531170 vs ERR2713040 ERR11531170 vs ERR2713043 ERR11531170 vs ERR2713062 ERR11531170 vs ERR2713082 ERR11531170 vs ERR2713083 ERR11531170 vs ERR2713095 ERR11531170 vs ERR2713104 ERR11531170 vs ERR2789853 ERR11531170 vs ERR4436576 ERR11531170 vs SRR1981646 ERR11531170 vs SRR33302441 ERR11531170 vs ERR13765590 ERR11531170 vs ERR13765609 ERR11531170 vs ERR13765626 ERR11531170 vs ERR13765629 ERR11531170 vs ERR13765637 ERR11531170 vs ERR15563860 ERR11531170 vs ERR16046165 ERR11531170 vs ERR16046184 ERR11531170 vs ERR16046185 ERR11531170 vs ERR16046223 ERR11531170 vs ERR16046246 ERR11531170 vs ERR16046342 ERR11531170 vs ERR16046348 ERR11531170 vs ERR16046364 ERR11531170 vs ERR16046374 ERR11531170 vs ERR16046383 ERR11531170 vs ERR16046402 ERR11531170 vs ERR16046432 ERR11531170 vs SRR23378191 ERR11531170 vs SRR23378198 ERR11531170 vs SRR23378202 ERR11531170 vs SRR23378204 ERR11531170 vs SRR23378207 ERR11531170 vs SRR23378211 ERR11531170 vs SRR23378212 ERR11531170 vs SRR23378214 ERR11531170 vs SRR23378215 ERR11531170 vs SRR23378217 ERR11531170 vs SRR23378218 ERR11531170 vs SRR23378219 ERR11531170 vs SRR23378222 ERR11531170 vs SRR23378224 ERR11531170 vs SRR23378226 ERR11531170 vs SRR23378229 ERR11531170 vs SRR23378239 ERR11531170 vs SRR23378240 ERR11531170 vs SRR23378241 ERR11531170 vs SRR23378243 ERR11531170 vs SRR27099150 ERR11531170 vs SRR27099166 ERR11531170 vs SRR33418247 ERR11531170 vs SRR33468265 ERR11531170 vs SRR33592340 ERR11531170 vs SRR33609566 ERR11531170 vs SRR33657924 ERR11531170 vs SRR33674433 ERR11531170 vs SRR34997162 ERR11531170 vs SRR34997164 ERR11531170 vs SRR34997165 ERR11531170 vs SRR34997166 ERR11531176 vs DRR446252 ERR11531176 vs DRR446260 ERR11531176 vs DRR446277 ERR11531176 vs DRR446278 ERR11531176 vs DRR446279 ERR11531176 vs DRR446280 ERR11531176 vs DRR446284 ERR11531176 vs ERR11531054 ERR11531176 vs ERR11531108 ERR11531176 vs ERR11531112 ERR11531176 vs ERR11531170 ERR11531176 vs ERR11531176 ERR11531176 vs ERR11531195 ERR11531176 vs ERR11531200 ERR11531176 vs ERR11531201 ERR11531176 vs ERR11531203 ERR11531176 vs ERR11531204 ERR11531176 vs ERR11531219 ERR11531176 vs ERR11531244 ERR11531176 vs ERR11531245 ERR11531176 vs ERR11531248 ERR11531176 vs ERR11531249 ERR11531176 vs ERR11531326 ERR11531176 vs ERR11531340 ERR11531176 vs ERR11531347 ERR11531176 vs ERR11531393 ERR11531176 vs ERR11531429 ERR11531176 vs ERR11531460 ERR11531176 vs ERR11531461 ERR11531176 vs ERR11531465 ERR11531176 vs ERR11531471 ERR11531176 vs ERR11531473 ERR11531176 vs ERR11531495 ERR11531176 vs ERR11531497 ERR11531176 vs ERR11531516 ERR11531176 vs ERR11531554 ERR11531176 vs ERR11531582 ERR11531176 vs ERR2713035 ERR11531176 vs ERR2713039 ERR11531176 vs ERR2713040 ERR11531176 vs ERR2713043 ERR11531176 vs ERR2713062 ERR11531176 vs ERR2713082 ERR11531176 vs ERR2713083 ERR11531176 vs ERR2713095 ERR11531176 vs ERR2713104 ERR11531176 vs ERR2789853 ERR11531176 vs ERR4436576 ERR11531176 vs SRR1981646 ERR11531176 vs SRR33302441 ERR11531176 vs ERR13765590 ERR11531176 vs ERR13765609 ERR11531176 vs ERR13765626 ERR11531176 vs ERR13765629 ERR11531176 vs ERR13765637 ERR11531176 vs ERR15563860 ERR11531176 vs ERR16046165 ERR11531176 vs ERR16046184 ERR11531176 vs ERR16046185 ERR11531176 vs ERR16046223 ERR11531176 vs ERR16046246 ERR11531176 vs ERR16046342 ERR11531176 vs ERR16046348 ERR11531176 vs ERR16046364 ERR11531176 vs ERR16046374 ERR11531176 vs ERR16046383 ERR11531176 vs ERR16046402 ERR11531176 vs ERR16046432 ERR11531176 vs SRR23378191 ERR11531176 vs SRR23378198 ERR11531176 vs SRR23378202 ERR11531176 vs SRR23378204 ERR11531176 vs SRR23378207 ERR11531176 vs SRR23378211 ERR11531176 vs SRR23378212 ERR11531176 vs SRR23378214 ERR11531176 vs SRR23378215 ERR11531176 vs SRR23378217 ERR11531176 vs SRR23378218 ERR11531176 vs SRR23378219 ERR11531176 vs SRR23378222 ERR11531176 vs SRR23378224 ERR11531176 vs SRR23378226 ERR11531176 vs SRR23378229 ERR11531176 vs SRR23378239 ERR11531176 vs SRR23378240 ERR11531176 vs SRR23378241 ERR11531176 vs SRR23378243 ERR11531176 vs SRR27099150 ERR11531176 vs SRR27099166 ERR11531176 vs SRR33418247 ERR11531176 vs SRR33468265 ERR11531176 vs SRR33592340 ERR11531176 vs SRR33609566 ERR11531176 vs SRR33657924 ERR11531176 vs SRR33674433 ERR11531176 vs SRR34997162 ERR11531176 vs SRR34997164 ERR11531176 vs SRR34997165 ERR11531176 vs SRR34997166 ERR11531195 vs DRR446252 ERR11531195 vs DRR446260 ERR11531195 vs DRR446277 ERR11531195 vs DRR446278 ERR11531195 vs DRR446279 ERR11531195 vs DRR446280 ERR11531195 vs DRR446284 ERR11531195 vs ERR11531054 ERR11531195 vs ERR11531108 ERR11531195 vs ERR11531112 ERR11531195 vs ERR11531170 ERR11531195 vs ERR11531176 ERR11531195 vs ERR11531195 ERR11531195 vs ERR11531200 ERR11531195 vs ERR11531201 ERR11531195 vs ERR11531203 ERR11531195 vs ERR11531204 ERR11531195 vs ERR11531219 ERR11531195 vs ERR11531244 ERR11531195 vs ERR11531245 ERR11531195 vs ERR11531248 ERR11531195 vs ERR11531249 ERR11531195 vs ERR11531326 ERR11531195 vs ERR11531340 ERR11531195 vs ERR11531347 ERR11531195 vs ERR11531393 ERR11531195 vs ERR11531429 ERR11531195 vs ERR11531460 ERR11531195 vs ERR11531461 ERR11531195 vs ERR11531465 ERR11531195 vs ERR11531471 ERR11531195 vs ERR11531473 ERR11531195 vs ERR11531495 ERR11531195 vs ERR11531497 ERR11531195 vs ERR11531516 ERR11531195 vs ERR11531554 ERR11531195 vs ERR11531582 ERR11531195 vs ERR2713035 ERR11531195 vs ERR2713039 ERR11531195 vs ERR2713040 ERR11531195 vs ERR2713043 ERR11531195 vs ERR2713062 ERR11531195 vs ERR2713082 ERR11531195 vs ERR2713083 ERR11531195 vs ERR2713095 ERR11531195 vs ERR2713104 ERR11531195 vs ERR2789853 ERR11531195 vs ERR4436576 ERR11531195 vs SRR1981646 ERR11531195 vs SRR33302441 ERR11531195 vs ERR13765590 ERR11531195 vs ERR13765609 ERR11531195 vs ERR13765626 ERR11531195 vs ERR13765629 ERR11531195 vs ERR13765637 ERR11531195 vs ERR15563860 ERR11531195 vs ERR16046165 ERR11531195 vs ERR16046184 ERR11531195 vs ERR16046185 ERR11531195 vs ERR16046223 ERR11531195 vs ERR16046246 ERR11531195 vs ERR16046342 ERR11531195 vs ERR16046348 ERR11531195 vs ERR16046364 ERR11531195 vs ERR16046374 ERR11531195 vs ERR16046383 ERR11531195 vs ERR16046402 ERR11531195 vs ERR16046432 ERR11531195 vs SRR23378191 ERR11531195 vs SRR23378198 ERR11531195 vs SRR23378202 ERR11531195 vs SRR23378204 ERR11531195 vs SRR23378207 ERR11531195 vs SRR23378211 ERR11531195 vs SRR23378212 ERR11531195 vs SRR23378214 ERR11531195 vs SRR23378215 ERR11531195 vs SRR23378217 ERR11531195 vs SRR23378218 ERR11531195 vs SRR23378219 ERR11531195 vs SRR23378222 ERR11531195 vs SRR23378224 ERR11531195 vs SRR23378226 ERR11531195 vs SRR23378229 ERR11531195 vs SRR23378239 ERR11531195 vs SRR23378240 ERR11531195 vs SRR23378241 ERR11531195 vs SRR23378243 ERR11531195 vs SRR27099150 ERR11531195 vs SRR27099166 ERR11531195 vs SRR33418247 ERR11531195 vs SRR33468265 ERR11531195 vs SRR33592340 ERR11531195 vs SRR33609566 ERR11531195 vs SRR33657924 ERR11531195 vs SRR33674433 ERR11531195 vs SRR34997162 ERR11531195 vs SRR34997164 ERR11531195 vs SRR34997165 ERR11531195 vs SRR34997166 ERR11531200 vs DRR446252 ERR11531200 vs DRR446260 ERR11531200 vs DRR446277 ERR11531200 vs DRR446278 ERR11531200 vs DRR446279 ERR11531200 vs DRR446280 ERR11531200 vs DRR446284 ERR11531200 vs ERR11531054 ERR11531200 vs ERR11531108 ERR11531200 vs ERR11531112 ERR11531200 vs ERR11531170 ERR11531200 vs ERR11531176 ERR11531200 vs ERR11531195 ERR11531200 vs ERR11531200 ERR11531200 vs ERR11531201 ERR11531200 vs ERR11531203 ERR11531200 vs ERR11531204 ERR11531200 vs ERR11531219 ERR11531200 vs ERR11531244 ERR11531200 vs ERR11531245 ERR11531200 vs ERR11531248 ERR11531200 vs ERR11531249 ERR11531200 vs ERR11531326 ERR11531200 vs ERR11531340 ERR11531200 vs ERR11531347 ERR11531200 vs ERR11531393 ERR11531200 vs ERR11531429 ERR11531200 vs ERR11531460 ERR11531200 vs ERR11531461 ERR11531200 vs ERR11531465 ERR11531200 vs ERR11531471 ERR11531200 vs ERR11531473 ERR11531200 vs ERR11531495 ERR11531200 vs ERR11531497 ERR11531200 vs ERR11531516 ERR11531200 vs ERR11531554 ERR11531200 vs ERR11531582 ERR11531200 vs ERR2713035 ERR11531200 vs ERR2713039 ERR11531200 vs ERR2713040 ERR11531200 vs ERR2713043 ERR11531200 vs ERR2713062 ERR11531200 vs ERR2713082 ERR11531200 vs ERR2713083 ERR11531200 vs ERR2713095 ERR11531200 vs ERR2713104 ERR11531200 vs ERR2789853 ERR11531200 vs ERR4436576 ERR11531200 vs SRR1981646 ERR11531200 vs SRR33302441 ERR11531200 vs ERR13765590 ERR11531200 vs ERR13765609 ERR11531200 vs ERR13765626 ERR11531200 vs ERR13765629 ERR11531200 vs ERR13765637 ERR11531200 vs ERR15563860 ERR11531200 vs ERR16046165 ERR11531200 vs ERR16046184 ERR11531200 vs ERR16046185 ERR11531200 vs ERR16046223 ERR11531200 vs ERR16046246 ERR11531200 vs ERR16046342 ERR11531200 vs ERR16046348 ERR11531200 vs ERR16046364 ERR11531200 vs ERR16046374 ERR11531200 vs ERR16046383 ERR11531200 vs ERR16046402 ERR11531200 vs ERR16046432 ERR11531200 vs SRR23378191 ERR11531200 vs SRR23378198 ERR11531200 vs SRR23378202 ERR11531200 vs SRR23378204 ERR11531200 vs SRR23378207 ERR11531200 vs SRR23378211 ERR11531200 vs SRR23378212 ERR11531200 vs SRR23378214 ERR11531200 vs SRR23378215 ERR11531200 vs SRR23378217 ERR11531200 vs SRR23378218 ERR11531200 vs SRR23378219 ERR11531200 vs SRR23378222 ERR11531200 vs SRR23378224 ERR11531200 vs SRR23378226 ERR11531200 vs SRR23378229 ERR11531200 vs SRR23378239 ERR11531200 vs SRR23378240 ERR11531200 vs SRR23378241 ERR11531200 vs SRR23378243 ERR11531200 vs SRR27099150 ERR11531200 vs SRR27099166 ERR11531200 vs SRR33418247 ERR11531200 vs SRR33468265 ERR11531200 vs SRR33592340 ERR11531200 vs SRR33609566 ERR11531200 vs SRR33657924 ERR11531200 vs SRR33674433 ERR11531200 vs SRR34997162 ERR11531200 vs SRR34997164 ERR11531200 vs SRR34997165 ERR11531200 vs SRR34997166 ERR11531201 vs DRR446252 ERR11531201 vs DRR446260 ERR11531201 vs DRR446277 ERR11531201 vs DRR446278 ERR11531201 vs DRR446279 ERR11531201 vs DRR446280 ERR11531201 vs DRR446284 ERR11531201 vs ERR11531054 ERR11531201 vs ERR11531108 ERR11531201 vs ERR11531112 ERR11531201 vs ERR11531170 ERR11531201 vs ERR11531176 ERR11531201 vs ERR11531195 ERR11531201 vs ERR11531200 ERR11531201 vs ERR11531201 ERR11531201 vs ERR11531203 ERR11531201 vs ERR11531204 ERR11531201 vs ERR11531219 ERR11531201 vs ERR11531244 ERR11531201 vs ERR11531245 ERR11531201 vs ERR11531248 ERR11531201 vs ERR11531249 ERR11531201 vs ERR11531326 ERR11531201 vs ERR11531340 ERR11531201 vs ERR11531347 ERR11531201 vs ERR11531393 ERR11531201 vs ERR11531429 ERR11531201 vs ERR11531460 ERR11531201 vs ERR11531461 ERR11531201 vs ERR11531465 ERR11531201 vs ERR11531471 ERR11531201 vs ERR11531473 ERR11531201 vs ERR11531495 ERR11531201 vs ERR11531497 ERR11531201 vs ERR11531516 ERR11531201 vs ERR11531554 ERR11531201 vs ERR11531582 ERR11531201 vs ERR2713035 ERR11531201 vs ERR2713039 ERR11531201 vs ERR2713040 ERR11531201 vs ERR2713043 ERR11531201 vs ERR2713062 ERR11531201 vs ERR2713082 ERR11531201 vs ERR2713083 ERR11531201 vs ERR2713095 ERR11531201 vs ERR2713104 ERR11531201 vs ERR2789853 ERR11531201 vs ERR4436576 ERR11531201 vs SRR1981646 ERR11531201 vs SRR33302441 ERR11531201 vs ERR13765590 ERR11531201 vs ERR13765609 ERR11531201 vs ERR13765626 ERR11531201 vs ERR13765629 ERR11531201 vs ERR13765637 ERR11531201 vs ERR15563860 ERR11531201 vs ERR16046165 ERR11531201 vs ERR16046184 ERR11531201 vs ERR16046185 ERR11531201 vs ERR16046223 ERR11531201 vs ERR16046246 ERR11531201 vs ERR16046342 ERR11531201 vs ERR16046348 ERR11531201 vs ERR16046364 ERR11531201 vs ERR16046374 ERR11531201 vs ERR16046383 ERR11531201 vs ERR16046402 ERR11531201 vs ERR16046432 ERR11531201 vs SRR23378191 ERR11531201 vs SRR23378198 ERR11531201 vs SRR23378202 ERR11531201 vs SRR23378204 ERR11531201 vs SRR23378207 ERR11531201 vs SRR23378211 ERR11531201 vs SRR23378212 ERR11531201 vs SRR23378214 ERR11531201 vs SRR23378215 ERR11531201 vs SRR23378217 ERR11531201 vs SRR23378218 ERR11531201 vs SRR23378219 ERR11531201 vs SRR23378222 ERR11531201 vs SRR23378224 ERR11531201 vs SRR23378226 ERR11531201 vs SRR23378229 ERR11531201 vs SRR23378239 ERR11531201 vs SRR23378240 ERR11531201 vs SRR23378241 ERR11531201 vs SRR23378243 ERR11531201 vs SRR27099150 ERR11531201 vs SRR27099166 ERR11531201 vs SRR33418247 ERR11531201 vs SRR33468265 ERR11531201 vs SRR33592340 ERR11531201 vs SRR33609566 ERR11531201 vs SRR33657924 ERR11531201 vs SRR33674433 ERR11531201 vs SRR34997162 ERR11531201 vs SRR34997164 ERR11531201 vs SRR34997165 ERR11531201 vs SRR34997166 ERR11531203 vs DRR446252 ERR11531203 vs DRR446260 ERR11531203 vs DRR446277 ERR11531203 vs DRR446278 ERR11531203 vs DRR446279 ERR11531203 vs DRR446280 ERR11531203 vs DRR446284 ERR11531203 vs ERR11531054 ERR11531203 vs ERR11531108 ERR11531203 vs ERR11531112 ERR11531203 vs ERR11531170 ERR11531203 vs ERR11531176 ERR11531203 vs ERR11531195 ERR11531203 vs ERR11531200 ERR11531203 vs ERR11531201 ERR11531203 vs ERR11531203 ERR11531203 vs ERR11531204 ERR11531203 vs ERR11531219 ERR11531203 vs ERR11531244 ERR11531203 vs ERR11531245 ERR11531203 vs ERR11531248 ERR11531203 vs ERR11531249 ERR11531203 vs ERR11531326 ERR11531203 vs ERR11531340 ERR11531203 vs ERR11531347 ERR11531203 vs ERR11531393 ERR11531203 vs ERR11531429 ERR11531203 vs ERR11531460 ERR11531203 vs ERR11531461 ERR11531203 vs ERR11531465 ERR11531203 vs ERR11531471 ERR11531203 vs ERR11531473 ERR11531203 vs ERR11531495 ERR11531203 vs ERR11531497 ERR11531203 vs ERR11531516 ERR11531203 vs ERR11531554 ERR11531203 vs ERR11531582 ERR11531203 vs ERR2713035 ERR11531203 vs ERR2713039 ERR11531203 vs ERR2713040 ERR11531203 vs ERR2713043 ERR11531203 vs ERR2713062 ERR11531203 vs ERR2713082 ERR11531203 vs ERR2713083 ERR11531203 vs ERR2713095 ERR11531203 vs ERR2713104 ERR11531203 vs ERR2789853 ERR11531203 vs ERR4436576 ERR11531203 vs SRR1981646 ERR11531203 vs SRR33302441 ERR11531203 vs ERR13765590 ERR11531203 vs ERR13765609 ERR11531203 vs ERR13765626 ERR11531203 vs ERR13765629 ERR11531203 vs ERR13765637 ERR11531203 vs ERR15563860 ERR11531203 vs ERR16046165 ERR11531203 vs ERR16046184 ERR11531203 vs ERR16046185 ERR11531203 vs ERR16046223 ERR11531203 vs ERR16046246 ERR11531203 vs ERR16046342 ERR11531203 vs ERR16046348 ERR11531203 vs ERR16046364 ERR11531203 vs ERR16046374 ERR11531203 vs ERR16046383 ERR11531203 vs ERR16046402 ERR11531203 vs ERR16046432 ERR11531203 vs SRR23378191 ERR11531203 vs SRR23378198 ERR11531203 vs SRR23378202 ERR11531203 vs SRR23378204 ERR11531203 vs SRR23378207 ERR11531203 vs SRR23378211 ERR11531203 vs SRR23378212 ERR11531203 vs SRR23378214 ERR11531203 vs SRR23378215 ERR11531203 vs SRR23378217 ERR11531203 vs SRR23378218 ERR11531203 vs SRR23378219 ERR11531203 vs SRR23378222 ERR11531203 vs SRR23378224 ERR11531203 vs SRR23378226 ERR11531203 vs SRR23378229 ERR11531203 vs SRR23378239 ERR11531203 vs SRR23378240 ERR11531203 vs SRR23378241 ERR11531203 vs SRR23378243 ERR11531203 vs SRR27099150 ERR11531203 vs SRR27099166 ERR11531203 vs SRR33418247 ERR11531203 vs SRR33468265 ERR11531203 vs SRR33592340 ERR11531203 vs SRR33609566 ERR11531203 vs SRR33657924 ERR11531203 vs SRR33674433 ERR11531203 vs SRR34997162 ERR11531203 vs SRR34997164 ERR11531203 vs SRR34997165 ERR11531203 vs SRR34997166 ERR11531204 vs DRR446252 ERR11531204 vs DRR446260 ERR11531204 vs DRR446277 ERR11531204 vs DRR446278 ERR11531204 vs DRR446279 ERR11531204 vs DRR446280 ERR11531204 vs DRR446284 ERR11531204 vs ERR11531054 ERR11531204 vs ERR11531108 ERR11531204 vs ERR11531112 ERR11531204 vs ERR11531170 ERR11531204 vs ERR11531176 ERR11531204 vs ERR11531195 ERR11531204 vs ERR11531200 ERR11531204 vs ERR11531201 ERR11531204 vs ERR11531203 ERR11531204 vs ERR11531204 ERR11531204 vs ERR11531219 ERR11531204 vs ERR11531244 ERR11531204 vs ERR11531245 ERR11531204 vs ERR11531248 ERR11531204 vs ERR11531249 ERR11531204 vs ERR11531326 ERR11531204 vs ERR11531340 ERR11531204 vs ERR11531347 ERR11531204 vs ERR11531393 ERR11531204 vs ERR11531429 ERR11531204 vs ERR11531460 ERR11531204 vs ERR11531461 ERR11531204 vs ERR11531465 ERR11531204 vs ERR11531471 ERR11531204 vs ERR11531473 ERR11531204 vs ERR11531495 ERR11531204 vs ERR11531497 ERR11531204 vs ERR11531516 ERR11531204 vs ERR11531554 ERR11531204 vs ERR11531582 ERR11531204 vs ERR2713035 ERR11531204 vs ERR2713039 ERR11531204 vs ERR2713040 ERR11531204 vs ERR2713043 ERR11531204 vs ERR2713062 ERR11531204 vs ERR2713082 ERR11531204 vs ERR2713083 ERR11531204 vs ERR2713095 ERR11531204 vs ERR2713104 ERR11531204 vs ERR2789853 ERR11531204 vs ERR4436576 ERR11531204 vs SRR1981646 ERR11531204 vs SRR33302441 ERR11531204 vs ERR13765590 ERR11531204 vs ERR13765609 ERR11531204 vs ERR13765626 ERR11531204 vs ERR13765629 ERR11531204 vs ERR13765637 ERR11531204 vs ERR15563860 ERR11531204 vs ERR16046165 ERR11531204 vs ERR16046184 ERR11531204 vs ERR16046185 ERR11531204 vs ERR16046223 ERR11531204 vs ERR16046246 ERR11531204 vs ERR16046342 ERR11531204 vs ERR16046348 ERR11531204 vs ERR16046364 ERR11531204 vs ERR16046374 ERR11531204 vs ERR16046383 ERR11531204 vs ERR16046402 ERR11531204 vs ERR16046432 ERR11531204 vs SRR23378191 ERR11531204 vs SRR23378198 ERR11531204 vs SRR23378202 ERR11531204 vs SRR23378204 ERR11531204 vs SRR23378207 ERR11531204 vs SRR23378211 ERR11531204 vs SRR23378212 ERR11531204 vs SRR23378214 ERR11531204 vs SRR23378215 ERR11531204 vs SRR23378217 ERR11531204 vs SRR23378218 ERR11531204 vs SRR23378219 ERR11531204 vs SRR23378222 ERR11531204 vs SRR23378224 ERR11531204 vs SRR23378226 ERR11531204 vs SRR23378229 ERR11531204 vs SRR23378239 ERR11531204 vs SRR23378240 ERR11531204 vs SRR23378241 ERR11531204 vs SRR23378243 ERR11531204 vs SRR27099150 ERR11531204 vs SRR27099166 ERR11531204 vs SRR33418247 ERR11531204 vs SRR33468265 ERR11531204 vs SRR33592340 ERR11531204 vs SRR33609566 ERR11531204 vs SRR33657924 ERR11531204 vs SRR33674433 ERR11531204 vs SRR34997162 ERR11531204 vs SRR34997164 ERR11531204 vs SRR34997165 ERR11531204 vs SRR34997166 ERR11531219 vs DRR446252 ERR11531219 vs DRR446260 ERR11531219 vs DRR446277 ERR11531219 vs DRR446278 ERR11531219 vs DRR446279 ERR11531219 vs DRR446280 ERR11531219 vs DRR446284 ERR11531219 vs ERR11531054 ERR11531219 vs ERR11531108 ERR11531219 vs ERR11531112 ERR11531219 vs ERR11531170 ERR11531219 vs ERR11531176 ERR11531219 vs ERR11531195 ERR11531219 vs ERR11531200 ERR11531219 vs ERR11531201 ERR11531219 vs ERR11531203 ERR11531219 vs ERR11531204 ERR11531219 vs ERR11531219 ERR11531219 vs ERR11531244 ERR11531219 vs ERR11531245 ERR11531219 vs ERR11531248 ERR11531219 vs ERR11531249 ERR11531219 vs ERR11531326 ERR11531219 vs ERR11531340 ERR11531219 vs ERR11531347 ERR11531219 vs ERR11531393 ERR11531219 vs ERR11531429 ERR11531219 vs ERR11531460 ERR11531219 vs ERR11531461 ERR11531219 vs ERR11531465 ERR11531219 vs ERR11531471 ERR11531219 vs ERR11531473 ERR11531219 vs ERR11531495 ERR11531219 vs ERR11531497 ERR11531219 vs ERR11531516 ERR11531219 vs ERR11531554 ERR11531219 vs ERR11531582 ERR11531219 vs ERR2713035 ERR11531219 vs ERR2713039 ERR11531219 vs ERR2713040 ERR11531219 vs ERR2713043 ERR11531219 vs ERR2713062 ERR11531219 vs ERR2713082 ERR11531219 vs ERR2713083 ERR11531219 vs ERR2713095 ERR11531219 vs ERR2713104 ERR11531219 vs ERR2789853 ERR11531219 vs ERR4436576 ERR11531219 vs SRR1981646 ERR11531219 vs SRR33302441 ERR11531219 vs ERR13765590 ERR11531219 vs ERR13765609 ERR11531219 vs ERR13765626 ERR11531219 vs ERR13765629 ERR11531219 vs ERR13765637 ERR11531219 vs ERR15563860 ERR11531219 vs ERR16046165 ERR11531219 vs ERR16046184 ERR11531219 vs ERR16046185 ERR11531219 vs ERR16046223 ERR11531219 vs ERR16046246 ERR11531219 vs ERR16046342 ERR11531219 vs ERR16046348 ERR11531219 vs ERR16046364 ERR11531219 vs ERR16046374 ERR11531219 vs ERR16046383 ERR11531219 vs ERR16046402 ERR11531219 vs ERR16046432 ERR11531219 vs SRR23378191 ERR11531219 vs SRR23378198 ERR11531219 vs SRR23378202 ERR11531219 vs SRR23378204 ERR11531219 vs SRR23378207 ERR11531219 vs SRR23378211 ERR11531219 vs SRR23378212 ERR11531219 vs SRR23378214 ERR11531219 vs SRR23378215 ERR11531219 vs SRR23378217 ERR11531219 vs SRR23378218 ERR11531219 vs SRR23378219 ERR11531219 vs SRR23378222 ERR11531219 vs SRR23378224 ERR11531219 vs SRR23378226 ERR11531219 vs SRR23378229 ERR11531219 vs SRR23378239 ERR11531219 vs SRR23378240 ERR11531219 vs SRR23378241 ERR11531219 vs SRR23378243 ERR11531219 vs SRR27099150 ERR11531219 vs SRR27099166 ERR11531219 vs SRR33418247 ERR11531219 vs SRR33468265 ERR11531219 vs SRR33592340 ERR11531219 vs SRR33609566 ERR11531219 vs SRR33657924 ERR11531219 vs SRR33674433 ERR11531219 vs SRR34997162 ERR11531219 vs SRR34997164 ERR11531219 vs SRR34997165 ERR11531219 vs SRR34997166 ERR11531244 vs DRR446252 ERR11531244 vs DRR446260 ERR11531244 vs DRR446277 ERR11531244 vs DRR446278 ERR11531244 vs DRR446279 ERR11531244 vs DRR446280 ERR11531244 vs DRR446284 ERR11531244 vs ERR11531054 ERR11531244 vs ERR11531108 ERR11531244 vs ERR11531112 ERR11531244 vs ERR11531170 ERR11531244 vs ERR11531176 ERR11531244 vs ERR11531195 ERR11531244 vs ERR11531200 ERR11531244 vs ERR11531201 ERR11531244 vs ERR11531203 ERR11531244 vs ERR11531204 ERR11531244 vs ERR11531219 ERR11531244 vs ERR11531244 ERR11531244 vs ERR11531245 ERR11531244 vs ERR11531248 ERR11531244 vs ERR11531249 ERR11531244 vs ERR11531326 ERR11531244 vs ERR11531340 ERR11531244 vs ERR11531347 ERR11531244 vs ERR11531393 ERR11531244 vs ERR11531429 ERR11531244 vs ERR11531460 ERR11531244 vs ERR11531461 ERR11531244 vs ERR11531465 ERR11531244 vs ERR11531471 ERR11531244 vs ERR11531473 ERR11531244 vs ERR11531495 ERR11531244 vs ERR11531497 ERR11531244 vs ERR11531516 ERR11531244 vs ERR11531554 ERR11531244 vs ERR11531582 ERR11531244 vs ERR2713035 ERR11531244 vs ERR2713039 ERR11531244 vs ERR2713040 ERR11531244 vs ERR2713043 ERR11531244 vs ERR2713062 ERR11531244 vs ERR2713082 ERR11531244 vs ERR2713083 ERR11531244 vs ERR2713095 ERR11531244 vs ERR2713104 ERR11531244 vs ERR2789853 ERR11531244 vs ERR4436576 ERR11531244 vs SRR1981646 ERR11531244 vs SRR33302441 ERR11531244 vs ERR13765590 ERR11531244 vs ERR13765609 ERR11531244 vs ERR13765626 ERR11531244 vs ERR13765629 ERR11531244 vs ERR13765637 ERR11531244 vs ERR15563860 ERR11531244 vs ERR16046165 ERR11531244 vs ERR16046184 ERR11531244 vs ERR16046185 ERR11531244 vs ERR16046223 ERR11531244 vs ERR16046246 ERR11531244 vs ERR16046342 ERR11531244 vs ERR16046348 ERR11531244 vs ERR16046364 ERR11531244 vs ERR16046374 ERR11531244 vs ERR16046383 ERR11531244 vs ERR16046402 ERR11531244 vs ERR16046432 ERR11531244 vs SRR23378191 ERR11531244 vs SRR23378198 ERR11531244 vs SRR23378202 ERR11531244 vs SRR23378204 ERR11531244 vs SRR23378207 ERR11531244 vs SRR23378211 ERR11531244 vs SRR23378212 ERR11531244 vs SRR23378214 ERR11531244 vs SRR23378215 ERR11531244 vs SRR23378217 ERR11531244 vs SRR23378218 ERR11531244 vs SRR23378219 ERR11531244 vs SRR23378222 ERR11531244 vs SRR23378224 ERR11531244 vs SRR23378226 ERR11531244 vs SRR23378229 ERR11531244 vs SRR23378239 ERR11531244 vs SRR23378240 ERR11531244 vs SRR23378241 ERR11531244 vs SRR23378243 ERR11531244 vs SRR27099150 ERR11531244 vs SRR27099166 ERR11531244 vs SRR33418247 ERR11531244 vs SRR33468265 ERR11531244 vs SRR33592340 ERR11531244 vs SRR33609566 ERR11531244 vs SRR33657924 ERR11531244 vs SRR33674433 ERR11531244 vs SRR34997162 ERR11531244 vs SRR34997164 ERR11531244 vs SRR34997165 ERR11531244 vs SRR34997166 ERR11531245 vs DRR446252 ERR11531245 vs DRR446260 ERR11531245 vs DRR446277 ERR11531245 vs DRR446278 ERR11531245 vs DRR446279 ERR11531245 vs DRR446280 ERR11531245 vs DRR446284 ERR11531245 vs ERR11531054 ERR11531245 vs ERR11531108 ERR11531245 vs ERR11531112 ERR11531245 vs ERR11531170 ERR11531245 vs ERR11531176 ERR11531245 vs ERR11531195 ERR11531245 vs ERR11531200 ERR11531245 vs ERR11531201 ERR11531245 vs ERR11531203 ERR11531245 vs ERR11531204 ERR11531245 vs ERR11531219 ERR11531245 vs ERR11531244 ERR11531245 vs ERR11531245 ERR11531245 vs ERR11531248 ERR11531245 vs ERR11531249 ERR11531245 vs ERR11531326 ERR11531245 vs ERR11531340 ERR11531245 vs ERR11531347 ERR11531245 vs ERR11531393 ERR11531245 vs ERR11531429 ERR11531245 vs ERR11531460 ERR11531245 vs ERR11531461 ERR11531245 vs ERR11531465 ERR11531245 vs ERR11531471 ERR11531245 vs ERR11531473 ERR11531245 vs ERR11531495 ERR11531245 vs ERR11531497 ERR11531245 vs ERR11531516 ERR11531245 vs ERR11531554 ERR11531245 vs ERR11531582 ERR11531245 vs ERR2713035 ERR11531245 vs ERR2713039 ERR11531245 vs ERR2713040 ERR11531245 vs ERR2713043 ERR11531245 vs ERR2713062 ERR11531245 vs ERR2713082 ERR11531245 vs ERR2713083 ERR11531245 vs ERR2713095 ERR11531245 vs ERR2713104 ERR11531245 vs ERR2789853 ERR11531245 vs ERR4436576 ERR11531245 vs SRR1981646 ERR11531245 vs SRR33302441 ERR11531245 vs ERR13765590 ERR11531245 vs ERR13765609 ERR11531245 vs ERR13765626 ERR11531245 vs ERR13765629 ERR11531245 vs ERR13765637 ERR11531245 vs ERR15563860 ERR11531245 vs ERR16046165 ERR11531245 vs ERR16046184 ERR11531245 vs ERR16046185 ERR11531245 vs ERR16046223 ERR11531245 vs ERR16046246 ERR11531245 vs ERR16046342 ERR11531245 vs ERR16046348 ERR11531245 vs ERR16046364 ERR11531245 vs ERR16046374 ERR11531245 vs ERR16046383 ERR11531245 vs ERR16046402 ERR11531245 vs ERR16046432 ERR11531245 vs SRR23378191 ERR11531245 vs SRR23378198 ERR11531245 vs SRR23378202 ERR11531245 vs SRR23378204 ERR11531245 vs SRR23378207 ERR11531245 vs SRR23378211 ERR11531245 vs SRR23378212 ERR11531245 vs SRR23378214 ERR11531245 vs SRR23378215 ERR11531245 vs SRR23378217 ERR11531245 vs SRR23378218 ERR11531245 vs SRR23378219 ERR11531245 vs SRR23378222 ERR11531245 vs SRR23378224 ERR11531245 vs SRR23378226 ERR11531245 vs SRR23378229 ERR11531245 vs SRR23378239 ERR11531245 vs SRR23378240 ERR11531245 vs SRR23378241 ERR11531245 vs SRR23378243 ERR11531245 vs SRR27099150 ERR11531245 vs SRR27099166 ERR11531245 vs SRR33418247 ERR11531245 vs SRR33468265 ERR11531245 vs SRR33592340 ERR11531245 vs SRR33609566 ERR11531245 vs SRR33657924 ERR11531245 vs SRR33674433 ERR11531245 vs SRR34997162 ERR11531245 vs SRR34997164 ERR11531245 vs SRR34997165 ERR11531245 vs SRR34997166 ERR11531248 vs DRR446252 ERR11531248 vs DRR446260 ERR11531248 vs DRR446277 ERR11531248 vs DRR446278 ERR11531248 vs DRR446279 ERR11531248 vs DRR446280 ERR11531248 vs DRR446284 ERR11531248 vs ERR11531054 ERR11531248 vs ERR11531108 ERR11531248 vs ERR11531112 ERR11531248 vs ERR11531170 ERR11531248 vs ERR11531176 ERR11531248 vs ERR11531195 ERR11531248 vs ERR11531200 ERR11531248 vs ERR11531201 ERR11531248 vs ERR11531203 ERR11531248 vs ERR11531204 ERR11531248 vs ERR11531219 ERR11531248 vs ERR11531244 ERR11531248 vs ERR11531245 ERR11531248 vs ERR11531248 ERR11531248 vs ERR11531249 ERR11531248 vs ERR11531326 ERR11531248 vs ERR11531340 ERR11531248 vs ERR11531347 ERR11531248 vs ERR11531393 ERR11531248 vs ERR11531429 ERR11531248 vs ERR11531460 ERR11531248 vs ERR11531461 ERR11531248 vs ERR11531465 ERR11531248 vs ERR11531471 ERR11531248 vs ERR11531473 ERR11531248 vs ERR11531495 ERR11531248 vs ERR11531497 ERR11531248 vs ERR11531516 ERR11531248 vs ERR11531554 ERR11531248 vs ERR11531582 ERR11531248 vs ERR2713035 ERR11531248 vs ERR2713039 ERR11531248 vs ERR2713040 ERR11531248 vs ERR2713043 ERR11531248 vs ERR2713062 ERR11531248 vs ERR2713082 ERR11531248 vs ERR2713083 ERR11531248 vs ERR2713095 ERR11531248 vs ERR2713104 ERR11531248 vs ERR2789853 ERR11531248 vs ERR4436576 ERR11531248 vs SRR1981646 ERR11531248 vs SRR33302441 ERR11531248 vs ERR13765590 ERR11531248 vs ERR13765609 ERR11531248 vs ERR13765626 ERR11531248 vs ERR13765629 ERR11531248 vs ERR13765637 ERR11531248 vs ERR15563860 ERR11531248 vs ERR16046165 ERR11531248 vs ERR16046184 ERR11531248 vs ERR16046185 ERR11531248 vs ERR16046223 ERR11531248 vs ERR16046246 ERR11531248 vs ERR16046342 ERR11531248 vs ERR16046348 ERR11531248 vs ERR16046364 ERR11531248 vs ERR16046374 ERR11531248 vs ERR16046383 ERR11531248 vs ERR16046402 ERR11531248 vs ERR16046432 ERR11531248 vs SRR23378191 ERR11531248 vs SRR23378198 ERR11531248 vs SRR23378202 ERR11531248 vs SRR23378204 ERR11531248 vs SRR23378207 ERR11531248 vs SRR23378211 ERR11531248 vs SRR23378212 ERR11531248 vs SRR23378214 ERR11531248 vs SRR23378215 ERR11531248 vs SRR23378217 ERR11531248 vs SRR23378218 ERR11531248 vs SRR23378219 ERR11531248 vs SRR23378222 ERR11531248 vs SRR23378224 ERR11531248 vs SRR23378226 ERR11531248 vs SRR23378229 ERR11531248 vs SRR23378239 ERR11531248 vs SRR23378240 ERR11531248 vs SRR23378241 ERR11531248 vs SRR23378243 ERR11531248 vs SRR27099150 ERR11531248 vs SRR27099166 ERR11531248 vs SRR33418247 ERR11531248 vs SRR33468265 ERR11531248 vs SRR33592340 ERR11531248 vs SRR33609566 ERR11531248 vs SRR33657924 ERR11531248 vs SRR33674433 ERR11531248 vs SRR34997162 ERR11531248 vs SRR34997164 ERR11531248 vs SRR34997165 ERR11531248 vs SRR34997166 ERR11531249 vs DRR446252 ERR11531249 vs DRR446260 ERR11531249 vs DRR446277 ERR11531249 vs DRR446278 ERR11531249 vs DRR446279 ERR11531249 vs DRR446280 ERR11531249 vs DRR446284 ERR11531249 vs ERR11531054 ERR11531249 vs ERR11531108 ERR11531249 vs ERR11531112 ERR11531249 vs ERR11531170 ERR11531249 vs ERR11531176 ERR11531249 vs ERR11531195 ERR11531249 vs ERR11531200 ERR11531249 vs ERR11531201 ERR11531249 vs ERR11531203 ERR11531249 vs ERR11531204 ERR11531249 vs ERR11531219 ERR11531249 vs ERR11531244 ERR11531249 vs ERR11531245 ERR11531249 vs ERR11531248 ERR11531249 vs ERR11531249 ERR11531249 vs ERR11531326 ERR11531249 vs ERR11531340 ERR11531249 vs ERR11531347 ERR11531249 vs ERR11531393 ERR11531249 vs ERR11531429 ERR11531249 vs ERR11531460 ERR11531249 vs ERR11531461 ERR11531249 vs ERR11531465 ERR11531249 vs ERR11531471 ERR11531249 vs ERR11531473 ERR11531249 vs ERR11531495 ERR11531249 vs ERR11531497 ERR11531249 vs ERR11531516 ERR11531249 vs ERR11531554 ERR11531249 vs ERR11531582 ERR11531249 vs ERR2713035 ERR11531249 vs ERR2713039 ERR11531249 vs ERR2713040 ERR11531249 vs ERR2713043 ERR11531249 vs ERR2713062 ERR11531249 vs ERR2713082 ERR11531249 vs ERR2713083 ERR11531249 vs ERR2713095 ERR11531249 vs ERR2713104 ERR11531249 vs ERR2789853 ERR11531249 vs ERR4436576 ERR11531249 vs SRR1981646 ERR11531249 vs SRR33302441 ERR11531249 vs ERR13765590 ERR11531249 vs ERR13765609 ERR11531249 vs ERR13765626 ERR11531249 vs ERR13765629 ERR11531249 vs ERR13765637 ERR11531249 vs ERR15563860 ERR11531249 vs ERR16046165 ERR11531249 vs ERR16046184 ERR11531249 vs ERR16046185 ERR11531249 vs ERR16046223 ERR11531249 vs ERR16046246 ERR11531249 vs ERR16046342 ERR11531249 vs ERR16046348 ERR11531249 vs ERR16046364 ERR11531249 vs ERR16046374 ERR11531249 vs ERR16046383 ERR11531249 vs ERR16046402 ERR11531249 vs ERR16046432 ERR11531249 vs SRR23378191 ERR11531249 vs SRR23378198 ERR11531249 vs SRR23378202 ERR11531249 vs SRR23378204 ERR11531249 vs SRR23378207 ERR11531249 vs SRR23378211 ERR11531249 vs SRR23378212 ERR11531249 vs SRR23378214 ERR11531249 vs SRR23378215 ERR11531249 vs SRR23378217 ERR11531249 vs SRR23378218 ERR11531249 vs SRR23378219 ERR11531249 vs SRR23378222 ERR11531249 vs SRR23378224 ERR11531249 vs SRR23378226 ERR11531249 vs SRR23378229 ERR11531249 vs SRR23378239 ERR11531249 vs SRR23378240 ERR11531249 vs SRR23378241 ERR11531249 vs SRR23378243 ERR11531249 vs SRR27099150 ERR11531249 vs SRR27099166 ERR11531249 vs SRR33418247 ERR11531249 vs SRR33468265 ERR11531249 vs SRR33592340 ERR11531249 vs SRR33609566 ERR11531249 vs SRR33657924 ERR11531249 vs SRR33674433 ERR11531249 vs SRR34997162 ERR11531249 vs SRR34997164 ERR11531249 vs SRR34997165 ERR11531249 vs SRR34997166 ERR11531326 vs DRR446252 ERR11531326 vs DRR446260 ERR11531326 vs DRR446277 ERR11531326 vs DRR446278 ERR11531326 vs DRR446279 ERR11531326 vs DRR446280 ERR11531326 vs DRR446284 ERR11531326 vs ERR11531054 ERR11531326 vs ERR11531108 ERR11531326 vs ERR11531112 ERR11531326 vs ERR11531170 ERR11531326 vs ERR11531176 ERR11531326 vs ERR11531195 ERR11531326 vs ERR11531200 ERR11531326 vs ERR11531201 ERR11531326 vs ERR11531203 ERR11531326 vs ERR11531204 ERR11531326 vs ERR11531219 ERR11531326 vs ERR11531244 ERR11531326 vs ERR11531245 ERR11531326 vs ERR11531248 ERR11531326 vs ERR11531249 ERR11531326 vs ERR11531326 ERR11531326 vs ERR11531340 ERR11531326 vs ERR11531347 ERR11531326 vs ERR11531393 ERR11531326 vs ERR11531429 ERR11531326 vs ERR11531460 ERR11531326 vs ERR11531461 ERR11531326 vs ERR11531465 ERR11531326 vs ERR11531471 ERR11531326 vs ERR11531473 ERR11531326 vs ERR11531495 ERR11531326 vs ERR11531497 ERR11531326 vs ERR11531516 ERR11531326 vs ERR11531554 ERR11531326 vs ERR11531582 ERR11531326 vs ERR2713035 ERR11531326 vs ERR2713039 ERR11531326 vs ERR2713040 ERR11531326 vs ERR2713043 ERR11531326 vs ERR2713062 ERR11531326 vs ERR2713082 ERR11531326 vs ERR2713083 ERR11531326 vs ERR2713095 ERR11531326 vs ERR2713104 ERR11531326 vs ERR2789853 ERR11531326 vs ERR4436576 ERR11531326 vs SRR1981646 ERR11531326 vs SRR33302441 ERR11531326 vs ERR13765590 ERR11531326 vs ERR13765609 ERR11531326 vs ERR13765626 ERR11531326 vs ERR13765629 ERR11531326 vs ERR13765637 ERR11531326 vs ERR15563860 ERR11531326 vs ERR16046165 ERR11531326 vs ERR16046184 ERR11531326 vs ERR16046185 ERR11531326 vs ERR16046223 ERR11531326 vs ERR16046246 ERR11531326 vs ERR16046342 ERR11531326 vs ERR16046348 ERR11531326 vs ERR16046364 ERR11531326 vs ERR16046374 ERR11531326 vs ERR16046383 ERR11531326 vs ERR16046402 ERR11531326 vs ERR16046432 ERR11531326 vs SRR23378191 ERR11531326 vs SRR23378198 ERR11531326 vs SRR23378202 ERR11531326 vs SRR23378204 ERR11531326 vs SRR23378207 ERR11531326 vs SRR23378211 ERR11531326 vs SRR23378212 ERR11531326 vs SRR23378214 ERR11531326 vs SRR23378215 ERR11531326 vs SRR23378217 ERR11531326 vs SRR23378218 ERR11531326 vs SRR23378219 ERR11531326 vs SRR23378222 ERR11531326 vs SRR23378224 ERR11531326 vs SRR23378226 ERR11531326 vs SRR23378229 ERR11531326 vs SRR23378239 ERR11531326 vs SRR23378240 ERR11531326 vs SRR23378241 ERR11531326 vs SRR23378243 ERR11531326 vs SRR27099150 ERR11531326 vs SRR27099166 ERR11531326 vs SRR33418247 ERR11531326 vs SRR33468265 ERR11531326 vs SRR33592340 ERR11531326 vs SRR33609566 ERR11531326 vs SRR33657924 ERR11531326 vs SRR33674433 ERR11531326 vs SRR34997162 ERR11531326 vs SRR34997164 ERR11531326 vs SRR34997165 ERR11531326 vs SRR34997166 ERR11531340 vs DRR446252 ERR11531340 vs DRR446260 ERR11531340 vs DRR446277 ERR11531340 vs DRR446278 ERR11531340 vs DRR446279 ERR11531340 vs DRR446280 ERR11531340 vs DRR446284 ERR11531340 vs ERR11531054 ERR11531340 vs ERR11531108 ERR11531340 vs ERR11531112 ERR11531340 vs ERR11531170 ERR11531340 vs ERR11531176 ERR11531340 vs ERR11531195 ERR11531340 vs ERR11531200 ERR11531340 vs ERR11531201 ERR11531340 vs ERR11531203 ERR11531340 vs ERR11531204 ERR11531340 vs ERR11531219 ERR11531340 vs ERR11531244 ERR11531340 vs ERR11531245 ERR11531340 vs ERR11531248 ERR11531340 vs ERR11531249 ERR11531340 vs ERR11531326 ERR11531340 vs ERR11531340 ERR11531340 vs ERR11531347 ERR11531340 vs ERR11531393 ERR11531340 vs ERR11531429 ERR11531340 vs ERR11531460 ERR11531340 vs ERR11531461 ERR11531340 vs ERR11531465 ERR11531340 vs ERR11531471 ERR11531340 vs ERR11531473 ERR11531340 vs ERR11531495 ERR11531340 vs ERR11531497 ERR11531340 vs ERR11531516 ERR11531340 vs ERR11531554 ERR11531340 vs ERR11531582 ERR11531340 vs ERR2713035 ERR11531340 vs ERR2713039 ERR11531340 vs ERR2713040 ERR11531340 vs ERR2713043 ERR11531340 vs ERR2713062 ERR11531340 vs ERR2713082 ERR11531340 vs ERR2713083 ERR11531340 vs ERR2713095 ERR11531340 vs ERR2713104 ERR11531340 vs ERR2789853 ERR11531340 vs ERR4436576 ERR11531340 vs SRR1981646 ERR11531340 vs SRR33302441 ERR11531340 vs ERR13765590 ERR11531340 vs ERR13765609 ERR11531340 vs ERR13765626 ERR11531340 vs ERR13765629 ERR11531340 vs ERR13765637 ERR11531340 vs ERR15563860 ERR11531340 vs ERR16046165 ERR11531340 vs ERR16046184 ERR11531340 vs ERR16046185 ERR11531340 vs ERR16046223 ERR11531340 vs ERR16046246 ERR11531340 vs ERR16046342 ERR11531340 vs ERR16046348 ERR11531340 vs ERR16046364 ERR11531340 vs ERR16046374 ERR11531340 vs ERR16046383 ERR11531340 vs ERR16046402 ERR11531340 vs ERR16046432 ERR11531340 vs SRR23378191 ERR11531340 vs SRR23378198 ERR11531340 vs SRR23378202 ERR11531340 vs SRR23378204 ERR11531340 vs SRR23378207 ERR11531340 vs SRR23378211 ERR11531340 vs SRR23378212 ERR11531340 vs SRR23378214 ERR11531340 vs SRR23378215 ERR11531340 vs SRR23378217 ERR11531340 vs SRR23378218 ERR11531340 vs SRR23378219 ERR11531340 vs SRR23378222 ERR11531340 vs SRR23378224 ERR11531340 vs SRR23378226 ERR11531340 vs SRR23378229 ERR11531340 vs SRR23378239 ERR11531340 vs SRR23378240 ERR11531340 vs SRR23378241 ERR11531340 vs SRR23378243 ERR11531340 vs SRR27099150 ERR11531340 vs SRR27099166 ERR11531340 vs SRR33418247 ERR11531340 vs SRR33468265 ERR11531340 vs SRR33592340 ERR11531340 vs SRR33609566 ERR11531340 vs SRR33657924 ERR11531340 vs SRR33674433 ERR11531340 vs SRR34997162 ERR11531340 vs SRR34997164 ERR11531340 vs SRR34997165 ERR11531340 vs SRR34997166 ERR11531347 vs DRR446252 ERR11531347 vs DRR446260 ERR11531347 vs DRR446277 ERR11531347 vs DRR446278 ERR11531347 vs DRR446279 ERR11531347 vs DRR446280 ERR11531347 vs DRR446284 ERR11531347 vs ERR11531054 ERR11531347 vs ERR11531108 ERR11531347 vs ERR11531112 ERR11531347 vs ERR11531170 ERR11531347 vs ERR11531176 ERR11531347 vs ERR11531195 ERR11531347 vs ERR11531200 ERR11531347 vs ERR11531201 ERR11531347 vs ERR11531203 ERR11531347 vs ERR11531204 ERR11531347 vs ERR11531219 ERR11531347 vs ERR11531244 ERR11531347 vs ERR11531245 ERR11531347 vs ERR11531248 ERR11531347 vs ERR11531249 ERR11531347 vs ERR11531326 ERR11531347 vs ERR11531340 ERR11531347 vs ERR11531347 ERR11531347 vs ERR11531393 ERR11531347 vs ERR11531429 ERR11531347 vs ERR11531460 ERR11531347 vs ERR11531461 ERR11531347 vs ERR11531465 ERR11531347 vs ERR11531471 ERR11531347 vs ERR11531473 ERR11531347 vs ERR11531495 ERR11531347 vs ERR11531497 ERR11531347 vs ERR11531516 ERR11531347 vs ERR11531554 ERR11531347 vs ERR11531582 ERR11531347 vs ERR2713035 ERR11531347 vs ERR2713039 ERR11531347 vs ERR2713040 ERR11531347 vs ERR2713043 ERR11531347 vs ERR2713062 ERR11531347 vs ERR2713082 ERR11531347 vs ERR2713083 ERR11531347 vs ERR2713095 ERR11531347 vs ERR2713104 ERR11531347 vs ERR2789853 ERR11531347 vs ERR4436576 ERR11531347 vs SRR1981646 ERR11531347 vs SRR33302441 ERR11531347 vs ERR13765590 ERR11531347 vs ERR13765609 ERR11531347 vs ERR13765626 ERR11531347 vs ERR13765629 ERR11531347 vs ERR13765637 ERR11531347 vs ERR15563860 ERR11531347 vs ERR16046165 ERR11531347 vs ERR16046184 ERR11531347 vs ERR16046185 ERR11531347 vs ERR16046223 ERR11531347 vs ERR16046246 ERR11531347 vs ERR16046342 ERR11531347 vs ERR16046348 ERR11531347 vs ERR16046364 ERR11531347 vs ERR16046374 ERR11531347 vs ERR16046383 ERR11531347 vs ERR16046402 ERR11531347 vs ERR16046432 ERR11531347 vs SRR23378191 ERR11531347 vs SRR23378198 ERR11531347 vs SRR23378202 ERR11531347 vs SRR23378204 ERR11531347 vs SRR23378207 ERR11531347 vs SRR23378211 ERR11531347 vs SRR23378212 ERR11531347 vs SRR23378214 ERR11531347 vs SRR23378215 ERR11531347 vs SRR23378217 ERR11531347 vs SRR23378218 ERR11531347 vs SRR23378219 ERR11531347 vs SRR23378222 ERR11531347 vs SRR23378224 ERR11531347 vs SRR23378226 ERR11531347 vs SRR23378229 ERR11531347 vs SRR23378239 ERR11531347 vs SRR23378240 ERR11531347 vs SRR23378241 ERR11531347 vs SRR23378243 ERR11531347 vs SRR27099150 ERR11531347 vs SRR27099166 ERR11531347 vs SRR33418247 ERR11531347 vs SRR33468265 ERR11531347 vs SRR33592340 ERR11531347 vs SRR33609566 ERR11531347 vs SRR33657924 ERR11531347 vs SRR33674433 ERR11531347 vs SRR34997162 ERR11531347 vs SRR34997164 ERR11531347 vs SRR34997165 ERR11531347 vs SRR34997166 ERR11531393 vs DRR446252 ERR11531393 vs DRR446260 ERR11531393 vs DRR446277 ERR11531393 vs DRR446278 ERR11531393 vs DRR446279 ERR11531393 vs DRR446280 ERR11531393 vs DRR446284 ERR11531393 vs ERR11531054 ERR11531393 vs ERR11531108 ERR11531393 vs ERR11531112 ERR11531393 vs ERR11531170 ERR11531393 vs ERR11531176 ERR11531393 vs ERR11531195 ERR11531393 vs ERR11531200 ERR11531393 vs ERR11531201 ERR11531393 vs ERR11531203 ERR11531393 vs ERR11531204 ERR11531393 vs ERR11531219 ERR11531393 vs ERR11531244 ERR11531393 vs ERR11531245 ERR11531393 vs ERR11531248 ERR11531393 vs ERR11531249 ERR11531393 vs ERR11531326 ERR11531393 vs ERR11531340 ERR11531393 vs ERR11531347 ERR11531393 vs ERR11531393 ERR11531393 vs ERR11531429 ERR11531393 vs ERR11531460 ERR11531393 vs ERR11531461 ERR11531393 vs ERR11531465 ERR11531393 vs ERR11531471 ERR11531393 vs ERR11531473 ERR11531393 vs ERR11531495 ERR11531393 vs ERR11531497 ERR11531393 vs ERR11531516 ERR11531393 vs ERR11531554 ERR11531393 vs ERR11531582 ERR11531393 vs ERR2713035 ERR11531393 vs ERR2713039 ERR11531393 vs ERR2713040 ERR11531393 vs ERR2713043 ERR11531393 vs ERR2713062 ERR11531393 vs ERR2713082 ERR11531393 vs ERR2713083 ERR11531393 vs ERR2713095 ERR11531393 vs ERR2713104 ERR11531393 vs ERR2789853 ERR11531393 vs ERR4436576 ERR11531393 vs SRR1981646 ERR11531393 vs SRR33302441 ERR11531393 vs ERR13765590 ERR11531393 vs ERR13765609 ERR11531393 vs ERR13765626 ERR11531393 vs ERR13765629 ERR11531393 vs ERR13765637 ERR11531393 vs ERR15563860 ERR11531393 vs ERR16046165 ERR11531393 vs ERR16046184 ERR11531393 vs ERR16046185 ERR11531393 vs ERR16046223 ERR11531393 vs ERR16046246 ERR11531393 vs ERR16046342 ERR11531393 vs ERR16046348 ERR11531393 vs ERR16046364 ERR11531393 vs ERR16046374 ERR11531393 vs ERR16046383 ERR11531393 vs ERR16046402 ERR11531393 vs ERR16046432 ERR11531393 vs SRR23378191 ERR11531393 vs SRR23378198 ERR11531393 vs SRR23378202 ERR11531393 vs SRR23378204 ERR11531393 vs SRR23378207 ERR11531393 vs SRR23378211 ERR11531393 vs SRR23378212 ERR11531393 vs SRR23378214 ERR11531393 vs SRR23378215 ERR11531393 vs SRR23378217 ERR11531393 vs SRR23378218 ERR11531393 vs SRR23378219 ERR11531393 vs SRR23378222 ERR11531393 vs SRR23378224 ERR11531393 vs SRR23378226 ERR11531393 vs SRR23378229 ERR11531393 vs SRR23378239 ERR11531393 vs SRR23378240 ERR11531393 vs SRR23378241 ERR11531393 vs SRR23378243 ERR11531393 vs SRR27099150 ERR11531393 vs SRR27099166 ERR11531393 vs SRR33418247 ERR11531393 vs SRR33468265 ERR11531393 vs SRR33592340 ERR11531393 vs SRR33609566 ERR11531393 vs SRR33657924 ERR11531393 vs SRR33674433 ERR11531393 vs SRR34997162 ERR11531393 vs SRR34997164 ERR11531393 vs SRR34997165 ERR11531393 vs SRR34997166 ERR11531429 vs DRR446252 ERR11531429 vs DRR446260 ERR11531429 vs DRR446277 ERR11531429 vs DRR446278 ERR11531429 vs DRR446279 ERR11531429 vs DRR446280 ERR11531429 vs DRR446284 ERR11531429 vs ERR11531054 ERR11531429 vs ERR11531108 ERR11531429 vs ERR11531112 ERR11531429 vs ERR11531170 ERR11531429 vs ERR11531176 ERR11531429 vs ERR11531195 ERR11531429 vs ERR11531200 ERR11531429 vs ERR11531201 ERR11531429 vs ERR11531203 ERR11531429 vs ERR11531204 ERR11531429 vs ERR11531219 ERR11531429 vs ERR11531244 ERR11531429 vs ERR11531245 ERR11531429 vs ERR11531248 ERR11531429 vs ERR11531249 ERR11531429 vs ERR11531326 ERR11531429 vs ERR11531340 ERR11531429 vs ERR11531347 ERR11531429 vs ERR11531393 ERR11531429 vs ERR11531429 ERR11531429 vs ERR11531460 ERR11531429 vs ERR11531461 ERR11531429 vs ERR11531465 ERR11531429 vs ERR11531471 ERR11531429 vs ERR11531473 ERR11531429 vs ERR11531495 ERR11531429 vs ERR11531497 ERR11531429 vs ERR11531516 ERR11531429 vs ERR11531554 ERR11531429 vs ERR11531582 ERR11531429 vs ERR2713035 ERR11531429 vs ERR2713039 ERR11531429 vs ERR2713040 ERR11531429 vs ERR2713043 ERR11531429 vs ERR2713062 ERR11531429 vs ERR2713082 ERR11531429 vs ERR2713083 ERR11531429 vs ERR2713095 ERR11531429 vs ERR2713104 ERR11531429 vs ERR2789853 ERR11531429 vs ERR4436576 ERR11531429 vs SRR1981646 ERR11531429 vs SRR33302441 ERR11531429 vs ERR13765590 ERR11531429 vs ERR13765609 ERR11531429 vs ERR13765626 ERR11531429 vs ERR13765629 ERR11531429 vs ERR13765637 ERR11531429 vs ERR15563860 ERR11531429 vs ERR16046165 ERR11531429 vs ERR16046184 ERR11531429 vs ERR16046185 ERR11531429 vs ERR16046223 ERR11531429 vs ERR16046246 ERR11531429 vs ERR16046342 ERR11531429 vs ERR16046348 ERR11531429 vs ERR16046364 ERR11531429 vs ERR16046374 ERR11531429 vs ERR16046383 ERR11531429 vs ERR16046402 ERR11531429 vs ERR16046432 ERR11531429 vs SRR23378191 ERR11531429 vs SRR23378198 ERR11531429 vs SRR23378202 ERR11531429 vs SRR23378204 ERR11531429 vs SRR23378207 ERR11531429 vs SRR23378211 ERR11531429 vs SRR23378212 ERR11531429 vs SRR23378214 ERR11531429 vs SRR23378215 ERR11531429 vs SRR23378217 ERR11531429 vs SRR23378218 ERR11531429 vs SRR23378219 ERR11531429 vs SRR23378222 ERR11531429 vs SRR23378224 ERR11531429 vs SRR23378226 ERR11531429 vs SRR23378229 ERR11531429 vs SRR23378239 ERR11531429 vs SRR23378240 ERR11531429 vs SRR23378241 ERR11531429 vs SRR23378243 ERR11531429 vs SRR27099150 ERR11531429 vs SRR27099166 ERR11531429 vs SRR33418247 ERR11531429 vs SRR33468265 ERR11531429 vs SRR33592340 ERR11531429 vs SRR33609566 ERR11531429 vs SRR33657924 ERR11531429 vs SRR33674433 ERR11531429 vs SRR34997162 ERR11531429 vs SRR34997164 ERR11531429 vs SRR34997165 ERR11531429 vs SRR34997166 ERR11531460 vs DRR446252 ERR11531460 vs DRR446260 ERR11531460 vs DRR446277 ERR11531460 vs DRR446278 ERR11531460 vs DRR446279 ERR11531460 vs DRR446280 ERR11531460 vs DRR446284 ERR11531460 vs ERR11531054 ERR11531460 vs ERR11531108 ERR11531460 vs ERR11531112 ERR11531460 vs ERR11531170 ERR11531460 vs ERR11531176 ERR11531460 vs ERR11531195 ERR11531460 vs ERR11531200 ERR11531460 vs ERR11531201 ERR11531460 vs ERR11531203 ERR11531460 vs ERR11531204 ERR11531460 vs ERR11531219 ERR11531460 vs ERR11531244 ERR11531460 vs ERR11531245 ERR11531460 vs ERR11531248 ERR11531460 vs ERR11531249 ERR11531460 vs ERR11531326 ERR11531460 vs ERR11531340 ERR11531460 vs ERR11531347 ERR11531460 vs ERR11531393 ERR11531460 vs ERR11531429 ERR11531460 vs ERR11531460 ERR11531460 vs ERR11531461 ERR11531460 vs ERR11531465 ERR11531460 vs ERR11531471 ERR11531460 vs ERR11531473 ERR11531460 vs ERR11531495 ERR11531460 vs ERR11531497 ERR11531460 vs ERR11531516 ERR11531460 vs ERR11531554 ERR11531460 vs ERR11531582 ERR11531460 vs ERR2713035 ERR11531460 vs ERR2713039 ERR11531460 vs ERR2713040 ERR11531460 vs ERR2713043 ERR11531460 vs ERR2713062 ERR11531460 vs ERR2713082 ERR11531460 vs ERR2713083 ERR11531460 vs ERR2713095 ERR11531460 vs ERR2713104 ERR11531460 vs ERR2789853 ERR11531460 vs ERR4436576 ERR11531460 vs SRR1981646 ERR11531460 vs SRR33302441 ERR11531460 vs ERR13765590 ERR11531460 vs ERR13765609 ERR11531460 vs ERR13765626 ERR11531460 vs ERR13765629 ERR11531460 vs ERR13765637 ERR11531460 vs ERR15563860 ERR11531460 vs ERR16046165 ERR11531460 vs ERR16046184 ERR11531460 vs ERR16046185 ERR11531460 vs ERR16046223 ERR11531460 vs ERR16046246 ERR11531460 vs ERR16046342 ERR11531460 vs ERR16046348 ERR11531460 vs ERR16046364 ERR11531460 vs ERR16046374 ERR11531460 vs ERR16046383 ERR11531460 vs ERR16046402 ERR11531460 vs ERR16046432 ERR11531460 vs SRR23378191 ERR11531460 vs SRR23378198 ERR11531460 vs SRR23378202 ERR11531460 vs SRR23378204 ERR11531460 vs SRR23378207 ERR11531460 vs SRR23378211 ERR11531460 vs SRR23378212 ERR11531460 vs SRR23378214 ERR11531460 vs SRR23378215 ERR11531460 vs SRR23378217 ERR11531460 vs SRR23378218 ERR11531460 vs SRR23378219 ERR11531460 vs SRR23378222 ERR11531460 vs SRR23378224 ERR11531460 vs SRR23378226 ERR11531460 vs SRR23378229 ERR11531460 vs SRR23378239 ERR11531460 vs SRR23378240 ERR11531460 vs SRR23378241 ERR11531460 vs SRR23378243 ERR11531460 vs SRR27099150 ERR11531460 vs SRR27099166 ERR11531460 vs SRR33418247 ERR11531460 vs SRR33468265 ERR11531460 vs SRR33592340 ERR11531460 vs SRR33609566 ERR11531460 vs SRR33657924 ERR11531460 vs SRR33674433 ERR11531460 vs SRR34997162 ERR11531460 vs SRR34997164 ERR11531460 vs SRR34997165 ERR11531460 vs SRR34997166 ERR11531461 vs DRR446252 ERR11531461 vs DRR446260 ERR11531461 vs DRR446277 ERR11531461 vs DRR446278 ERR11531461 vs DRR446279 ERR11531461 vs DRR446280 ERR11531461 vs DRR446284 ERR11531461 vs ERR11531054 ERR11531461 vs ERR11531108 ERR11531461 vs ERR11531112 ERR11531461 vs ERR11531170 ERR11531461 vs ERR11531176 ERR11531461 vs ERR11531195 ERR11531461 vs ERR11531200 ERR11531461 vs ERR11531201 ERR11531461 vs ERR11531203 ERR11531461 vs ERR11531204 ERR11531461 vs ERR11531219 ERR11531461 vs ERR11531244 ERR11531461 vs ERR11531245 ERR11531461 vs ERR11531248 ERR11531461 vs ERR11531249 ERR11531461 vs ERR11531326 ERR11531461 vs ERR11531340 ERR11531461 vs ERR11531347 ERR11531461 vs ERR11531393 ERR11531461 vs ERR11531429 ERR11531461 vs ERR11531460 ERR11531461 vs ERR11531461 ERR11531461 vs ERR11531465 ERR11531461 vs ERR11531471 ERR11531461 vs ERR11531473 ERR11531461 vs ERR11531495 ERR11531461 vs ERR11531497 ERR11531461 vs ERR11531516 ERR11531461 vs ERR11531554 ERR11531461 vs ERR11531582 ERR11531461 vs ERR2713035 ERR11531461 vs ERR2713039 ERR11531461 vs ERR2713040 ERR11531461 vs ERR2713043 ERR11531461 vs ERR2713062 ERR11531461 vs ERR2713082 ERR11531461 vs ERR2713083 ERR11531461 vs ERR2713095 ERR11531461 vs ERR2713104 ERR11531461 vs ERR2789853 ERR11531461 vs ERR4436576 ERR11531461 vs SRR1981646 ERR11531461 vs SRR33302441 ERR11531461 vs ERR13765590 ERR11531461 vs ERR13765609 ERR11531461 vs ERR13765626 ERR11531461 vs ERR13765629 ERR11531461 vs ERR13765637 ERR11531461 vs ERR15563860 ERR11531461 vs ERR16046165 ERR11531461 vs ERR16046184 ERR11531461 vs ERR16046185 ERR11531461 vs ERR16046223 ERR11531461 vs ERR16046246 ERR11531461 vs ERR16046342 ERR11531461 vs ERR16046348 ERR11531461 vs ERR16046364 ERR11531461 vs ERR16046374 ERR11531461 vs ERR16046383 ERR11531461 vs ERR16046402 ERR11531461 vs ERR16046432 ERR11531461 vs SRR23378191 ERR11531461 vs SRR23378198 ERR11531461 vs SRR23378202 ERR11531461 vs SRR23378204 ERR11531461 vs SRR23378207 ERR11531461 vs SRR23378211 ERR11531461 vs SRR23378212 ERR11531461 vs SRR23378214 ERR11531461 vs SRR23378215 ERR11531461 vs SRR23378217 ERR11531461 vs SRR23378218 ERR11531461 vs SRR23378219 ERR11531461 vs SRR23378222 ERR11531461 vs SRR23378224 ERR11531461 vs SRR23378226 ERR11531461 vs SRR23378229 ERR11531461 vs SRR23378239 ERR11531461 vs SRR23378240 ERR11531461 vs SRR23378241 ERR11531461 vs SRR23378243 ERR11531461 vs SRR27099150 ERR11531461 vs SRR27099166 ERR11531461 vs SRR33418247 ERR11531461 vs SRR33468265 ERR11531461 vs SRR33592340 ERR11531461 vs SRR33609566 ERR11531461 vs SRR33657924 ERR11531461 vs SRR33674433 ERR11531461 vs SRR34997162 ERR11531461 vs SRR34997164 ERR11531461 vs SRR34997165 ERR11531461 vs SRR34997166 ERR11531465 vs DRR446252 ERR11531465 vs DRR446260 ERR11531465 vs DRR446277 ERR11531465 vs DRR446278 ERR11531465 vs DRR446279 ERR11531465 vs DRR446280 ERR11531465 vs DRR446284 ERR11531465 vs ERR11531054 ERR11531465 vs ERR11531108 ERR11531465 vs ERR11531112 ERR11531465 vs ERR11531170 ERR11531465 vs ERR11531176 ERR11531465 vs ERR11531195 ERR11531465 vs ERR11531200 ERR11531465 vs ERR11531201 ERR11531465 vs ERR11531203 ERR11531465 vs ERR11531204 ERR11531465 vs ERR11531219 ERR11531465 vs ERR11531244 ERR11531465 vs ERR11531245 ERR11531465 vs ERR11531248 ERR11531465 vs ERR11531249 ERR11531465 vs ERR11531326 ERR11531465 vs ERR11531340 ERR11531465 vs ERR11531347 ERR11531465 vs ERR11531393 ERR11531465 vs ERR11531429 ERR11531465 vs ERR11531460 ERR11531465 vs ERR11531461 ERR11531465 vs ERR11531465 ERR11531465 vs ERR11531471 ERR11531465 vs ERR11531473 ERR11531465 vs ERR11531495 ERR11531465 vs ERR11531497 ERR11531465 vs ERR11531516 ERR11531465 vs ERR11531554 ERR11531465 vs ERR11531582 ERR11531465 vs ERR2713035 ERR11531465 vs ERR2713039 ERR11531465 vs ERR2713040 ERR11531465 vs ERR2713043 ERR11531465 vs ERR2713062 ERR11531465 vs ERR2713082 ERR11531465 vs ERR2713083 ERR11531465 vs ERR2713095 ERR11531465 vs ERR2713104 ERR11531465 vs ERR2789853 ERR11531465 vs ERR4436576 ERR11531465 vs SRR1981646 ERR11531465 vs SRR33302441 ERR11531465 vs ERR13765590 ERR11531465 vs ERR13765609 ERR11531465 vs ERR13765626 ERR11531465 vs ERR13765629 ERR11531465 vs ERR13765637 ERR11531465 vs ERR15563860 ERR11531465 vs ERR16046165 ERR11531465 vs ERR16046184 ERR11531465 vs ERR16046185 ERR11531465 vs ERR16046223 ERR11531465 vs ERR16046246 ERR11531465 vs ERR16046342 ERR11531465 vs ERR16046348 ERR11531465 vs ERR16046364 ERR11531465 vs ERR16046374 ERR11531465 vs ERR16046383 ERR11531465 vs ERR16046402 ERR11531465 vs ERR16046432 ERR11531465 vs SRR23378191 ERR11531465 vs SRR23378198 ERR11531465 vs SRR23378202 ERR11531465 vs SRR23378204 ERR11531465 vs SRR23378207 ERR11531465 vs SRR23378211 ERR11531465 vs SRR23378212 ERR11531465 vs SRR23378214 ERR11531465 vs SRR23378215 ERR11531465 vs SRR23378217 ERR11531465 vs SRR23378218 ERR11531465 vs SRR23378219 ERR11531465 vs SRR23378222 ERR11531465 vs SRR23378224 ERR11531465 vs SRR23378226 ERR11531465 vs SRR23378229 ERR11531465 vs SRR23378239 ERR11531465 vs SRR23378240 ERR11531465 vs SRR23378241 ERR11531465 vs SRR23378243 ERR11531465 vs SRR27099150 ERR11531465 vs SRR27099166 ERR11531465 vs SRR33418247 ERR11531465 vs SRR33468265 ERR11531465 vs SRR33592340 ERR11531465 vs SRR33609566 ERR11531465 vs SRR33657924 ERR11531465 vs SRR33674433 ERR11531465 vs SRR34997162 ERR11531465 vs SRR34997164 ERR11531465 vs SRR34997165 ERR11531465 vs SRR34997166 ERR11531471 vs DRR446252 ERR11531471 vs DRR446260 ERR11531471 vs DRR446277 ERR11531471 vs DRR446278 ERR11531471 vs DRR446279 ERR11531471 vs DRR446280 ERR11531471 vs DRR446284 ERR11531471 vs ERR11531054 ERR11531471 vs ERR11531108 ERR11531471 vs ERR11531112 ERR11531471 vs ERR11531170 ERR11531471 vs ERR11531176 ERR11531471 vs ERR11531195 ERR11531471 vs ERR11531200 ERR11531471 vs ERR11531201 ERR11531471 vs ERR11531203 ERR11531471 vs ERR11531204 ERR11531471 vs ERR11531219 ERR11531471 vs ERR11531244 ERR11531471 vs ERR11531245 ERR11531471 vs ERR11531248 ERR11531471 vs ERR11531249 ERR11531471 vs ERR11531326 ERR11531471 vs ERR11531340 ERR11531471 vs ERR11531347 ERR11531471 vs ERR11531393 ERR11531471 vs ERR11531429 ERR11531471 vs ERR11531460 ERR11531471 vs ERR11531461 ERR11531471 vs ERR11531465 ERR11531471 vs ERR11531471 ERR11531471 vs ERR11531473 ERR11531471 vs ERR11531495 ERR11531471 vs ERR11531497 ERR11531471 vs ERR11531516 ERR11531471 vs ERR11531554 ERR11531471 vs ERR11531582 ERR11531471 vs ERR2713035 ERR11531471 vs ERR2713039 ERR11531471 vs ERR2713040 ERR11531471 vs ERR2713043 ERR11531471 vs ERR2713062 ERR11531471 vs ERR2713082 ERR11531471 vs ERR2713083 ERR11531471 vs ERR2713095 ERR11531471 vs ERR2713104 ERR11531471 vs ERR2789853 ERR11531471 vs ERR4436576 ERR11531471 vs SRR1981646 ERR11531471 vs SRR33302441 ERR11531471 vs ERR13765590 ERR11531471 vs ERR13765609 ERR11531471 vs ERR13765626 ERR11531471 vs ERR13765629 ERR11531471 vs ERR13765637 ERR11531471 vs ERR15563860 ERR11531471 vs ERR16046165 ERR11531471 vs ERR16046184 ERR11531471 vs ERR16046185 ERR11531471 vs ERR16046223 ERR11531471 vs ERR16046246 ERR11531471 vs ERR16046342 ERR11531471 vs ERR16046348 ERR11531471 vs ERR16046364 ERR11531471 vs ERR16046374 ERR11531471 vs ERR16046383 ERR11531471 vs ERR16046402 ERR11531471 vs ERR16046432 ERR11531471 vs SRR23378191 ERR11531471 vs SRR23378198 ERR11531471 vs SRR23378202 ERR11531471 vs SRR23378204 ERR11531471 vs SRR23378207 ERR11531471 vs SRR23378211 ERR11531471 vs SRR23378212 ERR11531471 vs SRR23378214 ERR11531471 vs SRR23378215 ERR11531471 vs SRR23378217 ERR11531471 vs SRR23378218 ERR11531471 vs SRR23378219 ERR11531471 vs SRR23378222 ERR11531471 vs SRR23378224 ERR11531471 vs SRR23378226 ERR11531471 vs SRR23378229 ERR11531471 vs SRR23378239 ERR11531471 vs SRR23378240 ERR11531471 vs SRR23378241 ERR11531471 vs SRR23378243 ERR11531471 vs SRR27099150 ERR11531471 vs SRR27099166 ERR11531471 vs SRR33418247 ERR11531471 vs SRR33468265 ERR11531471 vs SRR33592340 ERR11531471 vs SRR33609566 ERR11531471 vs SRR33657924 ERR11531471 vs SRR33674433 ERR11531471 vs SRR34997162 ERR11531471 vs SRR34997164 ERR11531471 vs SRR34997165 ERR11531471 vs SRR34997166 ERR11531473 vs DRR446252 ERR11531473 vs DRR446260 ERR11531473 vs DRR446277 ERR11531473 vs DRR446278 ERR11531473 vs DRR446279 ERR11531473 vs DRR446280 ERR11531473 vs DRR446284 ERR11531473 vs ERR11531054 ERR11531473 vs ERR11531108 ERR11531473 vs ERR11531112 ERR11531473 vs ERR11531170 ERR11531473 vs ERR11531176 ERR11531473 vs ERR11531195 ERR11531473 vs ERR11531200 ERR11531473 vs ERR11531201 ERR11531473 vs ERR11531203 ERR11531473 vs ERR11531204 ERR11531473 vs ERR11531219 ERR11531473 vs ERR11531244 ERR11531473 vs ERR11531245 ERR11531473 vs ERR11531248 ERR11531473 vs ERR11531249 ERR11531473 vs ERR11531326 ERR11531473 vs ERR11531340 ERR11531473 vs ERR11531347 ERR11531473 vs ERR11531393 ERR11531473 vs ERR11531429 ERR11531473 vs ERR11531460 ERR11531473 vs ERR11531461 ERR11531473 vs ERR11531465 ERR11531473 vs ERR11531471 ERR11531473 vs ERR11531473 ERR11531473 vs ERR11531495 ERR11531473 vs ERR11531497 ERR11531473 vs ERR11531516 ERR11531473 vs ERR11531554 ERR11531473 vs ERR11531582 ERR11531473 vs ERR2713035 ERR11531473 vs ERR2713039 ERR11531473 vs ERR2713040 ERR11531473 vs ERR2713043 ERR11531473 vs ERR2713062 ERR11531473 vs ERR2713082 ERR11531473 vs ERR2713083 ERR11531473 vs ERR2713095 ERR11531473 vs ERR2713104 ERR11531473 vs ERR2789853 ERR11531473 vs ERR4436576 ERR11531473 vs SRR1981646 ERR11531473 vs SRR33302441 ERR11531473 vs ERR13765590 ERR11531473 vs ERR13765609 ERR11531473 vs ERR13765626 ERR11531473 vs ERR13765629 ERR11531473 vs ERR13765637 ERR11531473 vs ERR15563860 ERR11531473 vs ERR16046165 ERR11531473 vs ERR16046184 ERR11531473 vs ERR16046185 ERR11531473 vs ERR16046223 ERR11531473 vs ERR16046246 ERR11531473 vs ERR16046342 ERR11531473 vs ERR16046348 ERR11531473 vs ERR16046364 ERR11531473 vs ERR16046374 ERR11531473 vs ERR16046383 ERR11531473 vs ERR16046402 ERR11531473 vs ERR16046432 ERR11531473 vs SRR23378191 ERR11531473 vs SRR23378198 ERR11531473 vs SRR23378202 ERR11531473 vs SRR23378204 ERR11531473 vs SRR23378207 ERR11531473 vs SRR23378211 ERR11531473 vs SRR23378212 ERR11531473 vs SRR23378214 ERR11531473 vs SRR23378215 ERR11531473 vs SRR23378217 ERR11531473 vs SRR23378218 ERR11531473 vs SRR23378219 ERR11531473 vs SRR23378222 ERR11531473 vs SRR23378224 ERR11531473 vs SRR23378226 ERR11531473 vs SRR23378229 ERR11531473 vs SRR23378239 ERR11531473 vs SRR23378240 ERR11531473 vs SRR23378241 ERR11531473 vs SRR23378243 ERR11531473 vs SRR27099150 ERR11531473 vs SRR27099166 ERR11531473 vs SRR33418247 ERR11531473 vs SRR33468265 ERR11531473 vs SRR33592340 ERR11531473 vs SRR33609566 ERR11531473 vs SRR33657924 ERR11531473 vs SRR33674433 ERR11531473 vs SRR34997162 ERR11531473 vs SRR34997164 ERR11531473 vs SRR34997165 ERR11531473 vs SRR34997166 ERR11531495 vs DRR446252 ERR11531495 vs DRR446260 ERR11531495 vs DRR446277 ERR11531495 vs DRR446278 ERR11531495 vs DRR446279 ERR11531495 vs DRR446280 ERR11531495 vs DRR446284 ERR11531495 vs ERR11531054 ERR11531495 vs ERR11531108 ERR11531495 vs ERR11531112 ERR11531495 vs ERR11531170 ERR11531495 vs ERR11531176 ERR11531495 vs ERR11531195 ERR11531495 vs ERR11531200 ERR11531495 vs ERR11531201 ERR11531495 vs ERR11531203 ERR11531495 vs ERR11531204 ERR11531495 vs ERR11531219 ERR11531495 vs ERR11531244 ERR11531495 vs ERR11531245 ERR11531495 vs ERR11531248 ERR11531495 vs ERR11531249 ERR11531495 vs ERR11531326 ERR11531495 vs ERR11531340 ERR11531495 vs ERR11531347 ERR11531495 vs ERR11531393 ERR11531495 vs ERR11531429 ERR11531495 vs ERR11531460 ERR11531495 vs ERR11531461 ERR11531495 vs ERR11531465 ERR11531495 vs ERR11531471 ERR11531495 vs ERR11531473 ERR11531495 vs ERR11531495 ERR11531495 vs ERR11531497 ERR11531495 vs ERR11531516 ERR11531495 vs ERR11531554 ERR11531495 vs ERR11531582 ERR11531495 vs ERR2713035 ERR11531495 vs ERR2713039 ERR11531495 vs ERR2713040 ERR11531495 vs ERR2713043 ERR11531495 vs ERR2713062 ERR11531495 vs ERR2713082 ERR11531495 vs ERR2713083 ERR11531495 vs ERR2713095 ERR11531495 vs ERR2713104 ERR11531495 vs ERR2789853 ERR11531495 vs ERR4436576 ERR11531495 vs SRR1981646 ERR11531495 vs SRR33302441 ERR11531495 vs ERR13765590 ERR11531495 vs ERR13765609 ERR11531495 vs ERR13765626 ERR11531495 vs ERR13765629 ERR11531495 vs ERR13765637 ERR11531495 vs ERR15563860 ERR11531495 vs ERR16046165 ERR11531495 vs ERR16046184 ERR11531495 vs ERR16046185 ERR11531495 vs ERR16046223 ERR11531495 vs ERR16046246 ERR11531495 vs ERR16046342 ERR11531495 vs ERR16046348 ERR11531495 vs ERR16046364 ERR11531495 vs ERR16046374 ERR11531495 vs ERR16046383 ERR11531495 vs ERR16046402 ERR11531495 vs ERR16046432 ERR11531495 vs SRR23378191 ERR11531495 vs SRR23378198 ERR11531495 vs SRR23378202 ERR11531495 vs SRR23378204 ERR11531495 vs SRR23378207 ERR11531495 vs SRR23378211 ERR11531495 vs SRR23378212 ERR11531495 vs SRR23378214 ERR11531495 vs SRR23378215 ERR11531495 vs SRR23378217 ERR11531495 vs SRR23378218 ERR11531495 vs SRR23378219 ERR11531495 vs SRR23378222 ERR11531495 vs SRR23378224 ERR11531495 vs SRR23378226 ERR11531495 vs SRR23378229 ERR11531495 vs SRR23378239 ERR11531495 vs SRR23378240 ERR11531495 vs SRR23378241 ERR11531495 vs SRR23378243 ERR11531495 vs SRR27099150 ERR11531495 vs SRR27099166 ERR11531495 vs SRR33418247 ERR11531495 vs SRR33468265 ERR11531495 vs SRR33592340 ERR11531495 vs SRR33609566 ERR11531495 vs SRR33657924 ERR11531495 vs SRR33674433 ERR11531495 vs SRR34997162 ERR11531495 vs SRR34997164 ERR11531495 vs SRR34997165 ERR11531495 vs SRR34997166 ERR11531497 vs DRR446252 ERR11531497 vs DRR446260 ERR11531497 vs DRR446277 ERR11531497 vs DRR446278 ERR11531497 vs DRR446279 ERR11531497 vs DRR446280 ERR11531497 vs DRR446284 ERR11531497 vs ERR11531054 ERR11531497 vs ERR11531108 ERR11531497 vs ERR11531112 ERR11531497 vs ERR11531170 ERR11531497 vs ERR11531176 ERR11531497 vs ERR11531195 ERR11531497 vs ERR11531200 ERR11531497 vs ERR11531201 ERR11531497 vs ERR11531203 ERR11531497 vs ERR11531204 ERR11531497 vs ERR11531219 ERR11531497 vs ERR11531244 ERR11531497 vs ERR11531245 ERR11531497 vs ERR11531248 ERR11531497 vs ERR11531249 ERR11531497 vs ERR11531326 ERR11531497 vs ERR11531340 ERR11531497 vs ERR11531347 ERR11531497 vs ERR11531393 ERR11531497 vs ERR11531429 ERR11531497 vs ERR11531460 ERR11531497 vs ERR11531461 ERR11531497 vs ERR11531465 ERR11531497 vs ERR11531471 ERR11531497 vs ERR11531473 ERR11531497 vs ERR11531495 ERR11531497 vs ERR11531497 ERR11531497 vs ERR11531516 ERR11531497 vs ERR11531554 ERR11531497 vs ERR11531582 ERR11531497 vs ERR2713035 ERR11531497 vs ERR2713039 ERR11531497 vs ERR2713040 ERR11531497 vs ERR2713043 ERR11531497 vs ERR2713062 ERR11531497 vs ERR2713082 ERR11531497 vs ERR2713083 ERR11531497 vs ERR2713095 ERR11531497 vs ERR2713104 ERR11531497 vs ERR2789853 ERR11531497 vs ERR4436576 ERR11531497 vs SRR1981646 ERR11531497 vs SRR33302441 ERR11531497 vs ERR13765590 ERR11531497 vs ERR13765609 ERR11531497 vs ERR13765626 ERR11531497 vs ERR13765629 ERR11531497 vs ERR13765637 ERR11531497 vs ERR15563860 ERR11531497 vs ERR16046165 ERR11531497 vs ERR16046184 ERR11531497 vs ERR16046185 ERR11531497 vs ERR16046223 ERR11531497 vs ERR16046246 ERR11531497 vs ERR16046342 ERR11531497 vs ERR16046348 ERR11531497 vs ERR16046364 ERR11531497 vs ERR16046374 ERR11531497 vs ERR16046383 ERR11531497 vs ERR16046402 ERR11531497 vs ERR16046432 ERR11531497 vs SRR23378191 ERR11531497 vs SRR23378198 ERR11531497 vs SRR23378202 ERR11531497 vs SRR23378204 ERR11531497 vs SRR23378207 ERR11531497 vs SRR23378211 ERR11531497 vs SRR23378212 ERR11531497 vs SRR23378214 ERR11531497 vs SRR23378215 ERR11531497 vs SRR23378217 ERR11531497 vs SRR23378218 ERR11531497 vs SRR23378219 ERR11531497 vs SRR23378222 ERR11531497 vs SRR23378224 ERR11531497 vs SRR23378226 ERR11531497 vs SRR23378229 ERR11531497 vs SRR23378239 ERR11531497 vs SRR23378240 ERR11531497 vs SRR23378241 ERR11531497 vs SRR23378243 ERR11531497 vs SRR27099150 ERR11531497 vs SRR27099166 ERR11531497 vs SRR33418247 ERR11531497 vs SRR33468265 ERR11531497 vs SRR33592340 ERR11531497 vs SRR33609566 ERR11531497 vs SRR33657924 ERR11531497 vs SRR33674433 ERR11531497 vs SRR34997162 ERR11531497 vs SRR34997164 ERR11531497 vs SRR34997165 ERR11531497 vs SRR34997166 ERR11531516 vs DRR446252 ERR11531516 vs DRR446260 ERR11531516 vs DRR446277 ERR11531516 vs DRR446278 ERR11531516 vs DRR446279 ERR11531516 vs DRR446280 ERR11531516 vs DRR446284 ERR11531516 vs ERR11531054 ERR11531516 vs ERR11531108 ERR11531516 vs ERR11531112 ERR11531516 vs ERR11531170 ERR11531516 vs ERR11531176 ERR11531516 vs ERR11531195 ERR11531516 vs ERR11531200 ERR11531516 vs ERR11531201 ERR11531516 vs ERR11531203 ERR11531516 vs ERR11531204 ERR11531516 vs ERR11531219 ERR11531516 vs ERR11531244 ERR11531516 vs ERR11531245 ERR11531516 vs ERR11531248 ERR11531516 vs ERR11531249 ERR11531516 vs ERR11531326 ERR11531516 vs ERR11531340 ERR11531516 vs ERR11531347 ERR11531516 vs ERR11531393 ERR11531516 vs ERR11531429 ERR11531516 vs ERR11531460 ERR11531516 vs ERR11531461 ERR11531516 vs ERR11531465 ERR11531516 vs ERR11531471 ERR11531516 vs ERR11531473 ERR11531516 vs ERR11531495 ERR11531516 vs ERR11531497 ERR11531516 vs ERR11531516 ERR11531516 vs ERR11531554 ERR11531516 vs ERR11531582 ERR11531516 vs ERR2713035 ERR11531516 vs ERR2713039 ERR11531516 vs ERR2713040 ERR11531516 vs ERR2713043 ERR11531516 vs ERR2713062 ERR11531516 vs ERR2713082 ERR11531516 vs ERR2713083 ERR11531516 vs ERR2713095 ERR11531516 vs ERR2713104 ERR11531516 vs ERR2789853 ERR11531516 vs ERR4436576 ERR11531516 vs SRR1981646 ERR11531516 vs SRR33302441 ERR11531516 vs ERR13765590 ERR11531516 vs ERR13765609 ERR11531516 vs ERR13765626 ERR11531516 vs ERR13765629 ERR11531516 vs ERR13765637 ERR11531516 vs ERR15563860 ERR11531516 vs ERR16046165 ERR11531516 vs ERR16046184 ERR11531516 vs ERR16046185 ERR11531516 vs ERR16046223 ERR11531516 vs ERR16046246 ERR11531516 vs ERR16046342 ERR11531516 vs ERR16046348 ERR11531516 vs ERR16046364 ERR11531516 vs ERR16046374 ERR11531516 vs ERR16046383 ERR11531516 vs ERR16046402 ERR11531516 vs ERR16046432 ERR11531516 vs SRR23378191 ERR11531516 vs SRR23378198 ERR11531516 vs SRR23378202 ERR11531516 vs SRR23378204 ERR11531516 vs SRR23378207 ERR11531516 vs SRR23378211 ERR11531516 vs SRR23378212 ERR11531516 vs SRR23378214 ERR11531516 vs SRR23378215 ERR11531516 vs SRR23378217 ERR11531516 vs SRR23378218 ERR11531516 vs SRR23378219 ERR11531516 vs SRR23378222 ERR11531516 vs SRR23378224 ERR11531516 vs SRR23378226 ERR11531516 vs SRR23378229 ERR11531516 vs SRR23378239 ERR11531516 vs SRR23378240 ERR11531516 vs SRR23378241 ERR11531516 vs SRR23378243 ERR11531516 vs SRR27099150 ERR11531516 vs SRR27099166 ERR11531516 vs SRR33418247 ERR11531516 vs SRR33468265 ERR11531516 vs SRR33592340 ERR11531516 vs SRR33609566 ERR11531516 vs SRR33657924 ERR11531516 vs SRR33674433 ERR11531516 vs SRR34997162 ERR11531516 vs SRR34997164 ERR11531516 vs SRR34997165 ERR11531516 vs SRR34997166 ERR11531554 vs DRR446252 ERR11531554 vs DRR446260 ERR11531554 vs DRR446277 ERR11531554 vs DRR446278 ERR11531554 vs DRR446279 ERR11531554 vs DRR446280 ERR11531554 vs DRR446284 ERR11531554 vs ERR11531054 ERR11531554 vs ERR11531108 ERR11531554 vs ERR11531112 ERR11531554 vs ERR11531170 ERR11531554 vs ERR11531176 ERR11531554 vs ERR11531195 ERR11531554 vs ERR11531200 ERR11531554 vs ERR11531201 ERR11531554 vs ERR11531203 ERR11531554 vs ERR11531204 ERR11531554 vs ERR11531219 ERR11531554 vs ERR11531244 ERR11531554 vs ERR11531245 ERR11531554 vs ERR11531248 ERR11531554 vs ERR11531249 ERR11531554 vs ERR11531326 ERR11531554 vs ERR11531340 ERR11531554 vs ERR11531347 ERR11531554 vs ERR11531393 ERR11531554 vs ERR11531429 ERR11531554 vs ERR11531460 ERR11531554 vs ERR11531461 ERR11531554 vs ERR11531465 ERR11531554 vs ERR11531471 ERR11531554 vs ERR11531473 ERR11531554 vs ERR11531495 ERR11531554 vs ERR11531497 ERR11531554 vs ERR11531516 ERR11531554 vs ERR11531554 ERR11531554 vs ERR11531582 ERR11531554 vs ERR2713035 ERR11531554 vs ERR2713039 ERR11531554 vs ERR2713040 ERR11531554 vs ERR2713043 ERR11531554 vs ERR2713062 ERR11531554 vs ERR2713082 ERR11531554 vs ERR2713083 ERR11531554 vs ERR2713095 ERR11531554 vs ERR2713104 ERR11531554 vs ERR2789853 ERR11531554 vs ERR4436576 ERR11531554 vs SRR1981646 ERR11531554 vs SRR33302441 ERR11531554 vs ERR13765590 ERR11531554 vs ERR13765609 ERR11531554 vs ERR13765626 ERR11531554 vs ERR13765629 ERR11531554 vs ERR13765637 ERR11531554 vs ERR15563860 ERR11531554 vs ERR16046165 ERR11531554 vs ERR16046184 ERR11531554 vs ERR16046185 ERR11531554 vs ERR16046223 ERR11531554 vs ERR16046246 ERR11531554 vs ERR16046342 ERR11531554 vs ERR16046348 ERR11531554 vs ERR16046364 ERR11531554 vs ERR16046374 ERR11531554 vs ERR16046383 ERR11531554 vs ERR16046402 ERR11531554 vs ERR16046432 ERR11531554 vs SRR23378191 ERR11531554 vs SRR23378198 ERR11531554 vs SRR23378202 ERR11531554 vs SRR23378204 ERR11531554 vs SRR23378207 ERR11531554 vs SRR23378211 ERR11531554 vs SRR23378212 ERR11531554 vs SRR23378214 ERR11531554 vs SRR23378215 ERR11531554 vs SRR23378217 ERR11531554 vs SRR23378218 ERR11531554 vs SRR23378219 ERR11531554 vs SRR23378222 ERR11531554 vs SRR23378224 ERR11531554 vs SRR23378226 ERR11531554 vs SRR23378229 ERR11531554 vs SRR23378239 ERR11531554 vs SRR23378240 ERR11531554 vs SRR23378241 ERR11531554 vs SRR23378243 ERR11531554 vs SRR27099150 ERR11531554 vs SRR27099166 ERR11531554 vs SRR33418247 ERR11531554 vs SRR33468265 ERR11531554 vs SRR33592340 ERR11531554 vs SRR33609566 ERR11531554 vs SRR33657924 ERR11531554 vs SRR33674433 ERR11531554 vs SRR34997162 ERR11531554 vs SRR34997164 ERR11531554 vs SRR34997165 ERR11531554 vs SRR34997166 ERR11531582 vs DRR446252 ERR11531582 vs DRR446260 ERR11531582 vs DRR446277 ERR11531582 vs DRR446278 ERR11531582 vs DRR446279 ERR11531582 vs DRR446280 ERR11531582 vs DRR446284 ERR11531582 vs ERR11531054 ERR11531582 vs ERR11531108 ERR11531582 vs ERR11531112 ERR11531582 vs ERR11531170 ERR11531582 vs ERR11531176 ERR11531582 vs ERR11531195 ERR11531582 vs ERR11531200 ERR11531582 vs ERR11531201 ERR11531582 vs ERR11531203 ERR11531582 vs ERR11531204 ERR11531582 vs ERR11531219 ERR11531582 vs ERR11531244 ERR11531582 vs ERR11531245 ERR11531582 vs ERR11531248 ERR11531582 vs ERR11531249 ERR11531582 vs ERR11531326 ERR11531582 vs ERR11531340 ERR11531582 vs ERR11531347 ERR11531582 vs ERR11531393 ERR11531582 vs ERR11531429 ERR11531582 vs ERR11531460 ERR11531582 vs ERR11531461 ERR11531582 vs ERR11531465 ERR11531582 vs ERR11531471 ERR11531582 vs ERR11531473 ERR11531582 vs ERR11531495 ERR11531582 vs ERR11531497 ERR11531582 vs ERR11531516 ERR11531582 vs ERR11531554 ERR11531582 vs ERR11531582 ERR11531582 vs ERR2713035 ERR11531582 vs ERR2713039 ERR11531582 vs ERR2713040 ERR11531582 vs ERR2713043 ERR11531582 vs ERR2713062 ERR11531582 vs ERR2713082 ERR11531582 vs ERR2713083 ERR11531582 vs ERR2713095 ERR11531582 vs ERR2713104 ERR11531582 vs ERR2789853 ERR11531582 vs ERR4436576 ERR11531582 vs SRR1981646 ERR11531582 vs SRR33302441 ERR11531582 vs ERR13765590 ERR11531582 vs ERR13765609 ERR11531582 vs ERR13765626 ERR11531582 vs ERR13765629 ERR11531582 vs ERR13765637 ERR11531582 vs ERR15563860 ERR11531582 vs ERR16046165 ERR11531582 vs ERR16046184 ERR11531582 vs ERR16046185 ERR11531582 vs ERR16046223 ERR11531582 vs ERR16046246 ERR11531582 vs ERR16046342 ERR11531582 vs ERR16046348 ERR11531582 vs ERR16046364 ERR11531582 vs ERR16046374 ERR11531582 vs ERR16046383 ERR11531582 vs ERR16046402 ERR11531582 vs ERR16046432 ERR11531582 vs SRR23378191 ERR11531582 vs SRR23378198 ERR11531582 vs SRR23378202 ERR11531582 vs SRR23378204 ERR11531582 vs SRR23378207 ERR11531582 vs SRR23378211 ERR11531582 vs SRR23378212 ERR11531582 vs SRR23378214 ERR11531582 vs SRR23378215 ERR11531582 vs SRR23378217 ERR11531582 vs SRR23378218 ERR11531582 vs SRR23378219 ERR11531582 vs SRR23378222 ERR11531582 vs SRR23378224 ERR11531582 vs SRR23378226 ERR11531582 vs SRR23378229 ERR11531582 vs SRR23378239 ERR11531582 vs SRR23378240 ERR11531582 vs SRR23378241 ERR11531582 vs SRR23378243 ERR11531582 vs SRR27099150 ERR11531582 vs SRR27099166 ERR11531582 vs SRR33418247 ERR11531582 vs SRR33468265 ERR11531582 vs SRR33592340 ERR11531582 vs SRR33609566 ERR11531582 vs SRR33657924 ERR11531582 vs SRR33674433 ERR11531582 vs SRR34997162 ERR11531582 vs SRR34997164 ERR11531582 vs SRR34997165 ERR11531582 vs SRR34997166 ERR2713035 vs DRR446252 ERR2713035 vs DRR446260 ERR2713035 vs DRR446277 ERR2713035 vs DRR446278 ERR2713035 vs DRR446279 ERR2713035 vs DRR446280 ERR2713035 vs DRR446284 ERR2713035 vs ERR11531054 ERR2713035 vs ERR11531108 ERR2713035 vs ERR11531112
metric	value
phenotype	VRE_Resistant_vs_Sensitive_VRE
case_label	case (vancomycin resistant) (vancomycin resistant)
control_label	control (vancomycin sensitive) (vancomycin sensitive)
samples	100
pcoa1_variance_percent	52.9191
pcoa2_variance_percent	14.5368
pcoa1_plus_pcoa2_variance_percent	67.4559
case_within_mean_mash_distance	0.00814451821110204
control_within_mean_mash_distance	0.011415434298122449
between_group_mean_mash_distance	0.0103463463104
between_within_mash_distance_ratio	1.0579
pcoa_centroid_separation_score	0.2114
method	PCoA from square Mash distance matrix plus distance heatmap
layman_pcoa_interpretation	The PCoA plot suggests the two phenotype groups are relatively mixed by Mash distance (PCoA separation score 0.21; between/within Mash distance ratio 1.06). This reduces, but does not eliminate, concern that associations are driven only by lineage.
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06 Gene presence/absence GWAS plots

Brief interpretation: Gene Manhattan: Each dot is a gene or gene cluster. Taller dots mean stronger evidence of difference between the two groups. In this run, 1025 of 3411 tested gene features crossed the alpha=0.05 line. The tallest signal was vanRA (p=2.18e-10). Multiple significant dots may represent linked genes, mobile elements, or lineage effects, so review the priority table and population structure before interpreting them as independent causal markers. Gene QQ: Most QQ-plot points are close to the expected background, but the upper tail rises above expectation. That pattern is consistent with a small number of candidate gene associations rather than general inflation. The candidate signals should still be checked against population structure and annotation confidence.
Plot note: The gene association plot is a feature-index GWAS plot, not a full reference-coordinate Manhattan plot. Significant points are interpreted against the case (vancomycin resistant) versus control (vancomycin sensitive) phenotype.
Lay interpretation — gene Manhattan: Each dot is a gene or gene cluster. Taller dots mean stronger evidence of difference between the two groups. In this run, 1025 of 3411 tested gene features crossed the alpha=0.05 line. The tallest signal was vanRA (p=2.18e-10). Multiple significant dots may represent linked genes, mobile elements, or lineage effects, so review the priority table and population structure before interpreting them as independent causal markers.
Lay interpretation — gene QQ: Most QQ-plot points are close to the expected background, but the upper tail rises above expectation. That pattern is consistent with a small number of candidate gene associations rather than general inflation. The candidate signals should still be checked against population structure and annotation confidence.
Gene presence/absence GWAS Manhattan-style association plot 9.7 7.7 5.8 3.9 1.9 0.0 alpha=0.05 Feature index -log10(p-value)
Gene presence/absence GWAS QQ plot 9.7 7.7 5.8 3.9 1.9 0.0 alpha=0.05 Expected -log10(p-value) Observed -log10(p-value) 
metric	value
pvalues_detected	3411
points_drawn	3411
plot_label	Gene presence/absence GWAS
significant_points_at_alpha	1025
top_feature	vanRA
top_pvalue	2.18e-10
top_minus_log10_pvalue	9.6615
qq_median_delta_observed_minus_expected	0.1403
qq_tail_delta_observed_minus_expected	5.8276
manhattan_type	feature_index_not_genomic_coordinate
qq_plot	generated
layman_manhattan_interpretation	Each dot is a gene or gene cluster. Taller dots mean stronger evidence of difference between the two groups. In this run, 1025 of 3411 tested gene features crossed the alpha=0.05 line. The tallest signal was vanRA (p=2.18e-10). Multiple significant dots may represent linked genes, mobile elements, or lineage effects, so review the priority table and population structure before interpreting them as independent causal markers.
layman_qq_interpretation	Most QQ-plot points are close to the expected background, but the upper tail rises above expectation. That pattern is consistent with a small number of candidate gene associations rather than general inflation. The candidate signals should still be checked against population structure and annotation confidence.
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06 SNP marker GWAS

Brief interpretation: SNP Manhattan: Each dot is a SNP marker placed by reference coordinate when available. 9891 of 100138 tested SNP markers crossed the alpha=0.05 line. The strongest marker was NC_017960.1_1964655_T_C at position 1964655 (p=1.25e-10). Clusters of SNP hits can reflect true mutation signal, lineage background, or linked variants, so review the top-hit table and PCoA/kinship plots before interpretation. SNP QQ: The SNP QQ plot has a raised upper tail with less broad inflation across the rest of the plot. This pattern is compatible with a limited number of candidate SNP associations, but they still need biological validation and lineage checks.
SNP branch: run. SNP marker GWAS is intended for mutation-mediated phenotypes, including MTBC drug-resistance traits. Review case (vancomycin resistant)/control (vancomycin sensitive) population structure before interpreting SNP hits. Optional Gubbins status: not run.
Lay interpretation — SNP Manhattan: Each dot is a SNP marker placed by reference coordinate when available. 9891 of 100138 tested SNP markers crossed the alpha=0.05 line. The strongest marker was NC_017960.1_1964655_T_C at position 1964655 (p=1.25e-10). Clusters of SNP hits can reflect true mutation signal, lineage background, or linked variants, so review the top-hit table and PCoA/kinship plots before interpretation.
Lay interpretation — SNP QQ: The SNP QQ plot has a raised upper tail with less broad inflation across the rest of the plot. This pattern is compatible with a limited number of candidate SNP associations, but they still need biological validation and lineage checks.
SNP marker GWAS Manhattan plot 9.9 7.9 5.9 4.0 2.0 0.0 alpha=0.05 Reference genomic coordinate / marker order -log10(p-value)
SNP marker GWAS QQ plot 7.7 6.2 4.6 3.1 1.5 0.0 alpha=0.05 Expected -log10(p-value) Observed -log10(p-value)

Top priority SNP marker hits

metric	value
plot_label	SNP marker GWAS
pvalues_detected	100138
significant_points_at_alpha	9891
top_marker	NC_017960.1_1964655_T_C
top_position	1964655
top_pvalue	1.25e-10
top_minus_log10_pvalue	9.9031
qq_median_delta_observed_minus_expected	-0.3010
qq_tail_delta_observed_minus_expected	4.6015
points_drawn	5000
manhattan_type	reference_coordinate_when_available
qq_plot	generated
layman_manhattan_interpretation	Each dot is a SNP marker placed by reference coordinate when available. 9891 of 100138 tested SNP markers crossed the alpha=0.05 line. The strongest marker was NC_017960.1_1964655_T_C at position 1964655 (p=1.25e-10). Clusters of SNP hits can reflect true mutation signal, lineage background, or linked variants, so review the top-hit table and PCoA/kinship plots before interpretation.
layman_qq_interpretation	The SNP QQ plot has a raised upper tail with less broad inflation across the rest of the plot. This pattern is compatible with a limited number of candidate SNP associations, but they still need biological validation and lineage checks.

SNP hit table

SNP rank 1
HMPREF0351_RS09555
NC_017960.1_1964655_T_C | HMPREF0351_RS09555 | none confidence
none confidence

NAD(P)H-dependent glycerol-3-phosphatedehydrogenase

enriched: cases (vancomycin resistant) | p=1.25e-10 | OR=13.2484
SNP rank 2
NC_017960.1_619765_T_C
NC_017960.1_619765_T_C | no_reference_locus | none confidence
none confidence

intergenic_or_unannotated

enriched: controls (vancomycin sensitive) | p=2.76e-10 | OR=0.0375677
SNP rank 3
lpdD
NC_017960.1_420913_C_A | HMPREF0351_RS02020 | none confidence
none confidence

prenylated flavin chaperone LpdD

enriched: controls (vancomycin sensitive) | p=1.32e-09 | OR=0.141454
SNP rank 4
mutL
NC_017960.1_134864_G_C | HMPREF0351_RS00675 | none confidence
none confidence

DNA mismatch repair endonuclease MutL

enriched: controls (vancomycin sensitive) | p=4.3e-09 | OR=0.153114
SNP rank 5
HMPREF0351_RS07475
NC_017960.1_1526489_G_A | HMPREF0351_RS07475 | none confidence
none confidence

lipoprotein

enriched: cases (vancomycin resistant) | p=5.44e-09 | OR=22.7021
rank feature id variant id feature type contig position ref alt gene name product reference locus tag reference gene reference product case (vancomycin resistant) alt case (vancomycin resistant) total case (vancomycin resistant) frequency control (vancomycin sensitive) alt control (vancomycin sensitive) total control (vancomycin sensitive) frequency enriched in beta odds ratio odds ratio ci95 odds ratio ci95 lower odds ratio ci95 upper pyseer pvalue q value priority score annotation source reference location qual notes
1 NC_017960.1_1964655_T_C NC_017960.1_1964655_T_C snp NC_017960.1 1964655 T C HMPREF0351_RS09555 NAD(P)H-dependent glycerol-3-phosphatedehydrogenase HMPREF0351_RS09555 NAD(P)H-dependent glycerol-3-phosphatedehydrogenase 40 50 0.8000 11 50 0.2200 cases (vancomycin resistant) 3.06 13.2484 5.152-34.07 5.15212 34.0678 1.25e-10 9.9031 reference_GenBank_coordinate_overlap complement(1964520..1965545) . SNP-level association; inspect population structure before causal interpretation.
2 NC_017960.1_619765_T_C NC_017960.1_619765_T_C snp NC_017960.1 619765 T C NC_017960.1_619765_T_C intergenic_or_unannotated intergenic_or_unannotated 2 50 0.0400 29 50 0.5800 controls (vancomycin sensitive) -3.58 0.0375677 0.009382-0.1504 0.00938198 0.15043 2.76e-10 9.5591 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
3 NC_017960.1_420913_C_A NC_017960.1_420913_C_A snp NC_017960.1 420913 C A lpdD prenylated flavin chaperone LpdD HMPREF0351_RS02020 lpdD prenylated flavin chaperone LpdD 5 50 0.1000 23 50 0.4600 controls (vancomycin sensitive) -4.95 0.141454 0.04989-0.4011 0.0498905 0.401065 1.32e-09 8.8794 reference_GenBank_coordinate_overlap complement(420875..421294) . SNP-level association; inspect population structure before causal interpretation.
4 NC_017960.1_134864_G_C NC_017960.1_134864_G_C snp NC_017960.1 134864 G C mutL DNA mismatch repair endonuclease MutL HMPREF0351_RS00675 mutL DNA mismatch repair endonuclease MutL 5 50 0.1000 22 50 0.4400 controls (vancomycin sensitive) -4.8 0.153114 0.05394-0.4346 0.0539415 0.434615 4.3e-09 8.3665 reference_GenBank_coordinate_overlap 133733..135841 . SNP-level association; inspect population structure before causal interpretation.
5 NC_017960.1_1526489_G_A NC_017960.1_1526489_G_A snp NC_017960.1 1526489 G A HMPREF0351_RS07475 lipoprotein HMPREF0351_RS07475 lipoprotein 27 50 0.5400 2 50 0.0400 cases (vancomycin resistant) 3.32 22.7021 5.681-90.72 5.68126 90.7169 5.44e-09 8.2644 reference_GenBank_coordinate_overlap complement(1526225..1526665) . SNP-level association; inspect population structure before causal interpretation.
6 NC_017960.1_489879_C_A NC_017960.1_489879_C_A snp NC_017960.1 489879 C A HMPREF0351_RS02335 glycoside-pentoside-hexuronide (GPH):cationsymporter HMPREF0351_RS02335 glycoside-pentoside-hexuronide (GPH):cationsymporter 5 50 0.1000 23 50 0.4600 controls (vancomycin sensitive) -4.33 0.141454 0.04989-0.4011 0.0498905 0.401065 9.2e-09 8.0362 reference_GenBank_coordinate_overlap complement(489847..491301) . SNP-level association; inspect population structure before causal interpretation.
7 NC_017960.1_1965108_C_T NC_017960.1_1965108_C_T snp NC_017960.1 1965108 C T HMPREF0351_RS09555 NAD(P)H-dependent glycerol-3-phosphatedehydrogenase HMPREF0351_RS09555 NAD(P)H-dependent glycerol-3-phosphatedehydrogenase 40 50 0.8000 16 50 0.3200 cases (vancomycin resistant) 2.89 8.06494 3.288-19.78 3.28828 19.7803 1.41e-08 7.8508 reference_GenBank_coordinate_overlap complement(1964520..1965545) . SNP-level association; inspect population structure before causal interpretation.
8 NC_017960.1_1966518_A_G NC_017960.1_1966518_A_G snp NC_017960.1 1966518 A G hprK HPr(Ser) kinase/phosphatase HMPREF0351_RS09565 hprK HPr(Ser) kinase/phosphatase 31 50 0.6200 7 50 0.1400 cases (vancomycin resistant) 2.8 9.36923 3.591-24.44 3.59136 24.4427 1.46e-08 7.8356 reference_GenBank_coordinate_overlap complement(1966434..1967372) . SNP-level association; inspect population structure before causal interpretation.
9 NC_017960.1_1529984_G_A NC_017960.1_1529984_G_A snp NC_017960.1 1529984 G A HMPREF0351_RS07495 hypothetical protein HMPREF0351_RS07495 hypothetical protein 26 50 0.5200 2 50 0.0400 cases (vancomycin resistant) 3.24 20.9837 5.254-83.81 5.25387 83.8076 1.59e-08 7.7986 reference_GenBank_coordinate_overlap complement(1529919..1530251) . SNP-level association; inspect population structure before causal interpretation.
10 NC_017960.1_102263_G_A NC_017960.1_102263_G_A snp NC_017960.1 102263 G A gshAB bifunctional glutamate--cysteine ligaseGshA/glutathione synthetase GshB HMPREF0351_RS00520 gshAB bifunctional glutamate--cysteine ligaseGshA/glutathione synthetase GshB 5 50 0.1000 22 50 0.4400 controls (vancomycin sensitive) -4.36 0.153114 0.05394-0.4346 0.0539415 0.434615 1.63e-08 7.7878 reference_GenBank_coordinate_overlap 101864..104131 . SNP-level association; inspect population structure before causal interpretation.
11 NC_017960.1_462240_C_T NC_017960.1_462240_C_T snp NC_017960.1 462240 C T HMPREF0351_RS02205 Spx/MgsR family RNA polymerase-bindingregulatory protein HMPREF0351_RS02205 Spx/MgsR family RNA polymerase-bindingregulatory protein 5 50 0.1000 22 50 0.4400 controls (vancomycin sensitive) -4.36 0.153114 0.05394-0.4346 0.0539415 0.434615 1.63e-08 7.7878 reference_GenBank_coordinate_overlap 462129..462485 . SNP-level association; inspect population structure before causal interpretation.
12 NC_017960.1_486395_T_A NC_017960.1_486395_T_A snp NC_017960.1 486395 T A HMPREF0351_RS02320 Y-family DNA polymerase HMPREF0351_RS02320 Y-family DNA polymerase 5 50 0.1000 22 50 0.4400 controls (vancomycin sensitive) -4.36 0.153114 0.05394-0.4346 0.0539415 0.434615 1.63e-08 7.7878 reference_GenBank_coordinate_overlap complement(486068..487450) . SNP-level association; inspect population structure before causal interpretation.
13 NC_017960.1_535949_C_T NC_017960.1_535949_C_T snp NC_017960.1 535949 C T HMPREF0351_RS02555 amino acid permease HMPREF0351_RS02555 amino acid permease 5 50 0.1000 22 50 0.4400 controls (vancomycin sensitive) -4.36 0.153114 0.05394-0.4346 0.0539415 0.434615 1.63e-08 7.7878 reference_GenBank_coordinate_overlap 534702..536078 . SNP-level association; inspect population structure before causal interpretation.
14 NC_017960.1_1083867_T_G NC_017960.1_1083867_T_G snp NC_017960.1 1083867 T G HMPREF0351_RS05305 segregation/condensation protein A HMPREF0351_RS05305 segregation/condensation protein A 29 50 0.5800 4 50 0.0800 cases (vancomycin resistant) 2.88 14.1783 4.645-43.28 4.64515 43.2761 1.76e-08 7.7545 reference_GenBank_coordinate_overlap 1083617..1084387 . SNP-level association; inspect population structure before causal interpretation.
15 NC_017960.1_613325_C_T NC_017960.1_613325_C_T snp NC_017960.1 613325 C T HMPREF0351_RS02905 hypothetical protein HMPREF0351_RS02905 hypothetical protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 613140..613577 . SNP-level association; inspect population structure before causal interpretation.
16 NC_017960.1_614424_C_T NC_017960.1_614424_C_T snp NC_017960.1 614424 C T HMPREF0351_RS02910 diacylglycerol/lipid kinase family protein HMPREF0351_RS02910 diacylglycerol/lipid kinase family protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 613672..614556 . SNP-level association; inspect population structure before causal interpretation.
17 NC_017960.1_614526_A_G NC_017960.1_614526_A_G snp NC_017960.1 614526 A G HMPREF0351_RS02910 diacylglycerol/lipid kinase family protein HMPREF0351_RS02910 diacylglycerol/lipid kinase family protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 613672..614556 . SNP-level association; inspect population structure before causal interpretation.
18 NC_017960.1_614529_G_A NC_017960.1_614529_G_A snp NC_017960.1 614529 G A HMPREF0351_RS02910 diacylglycerol/lipid kinase family protein HMPREF0351_RS02910 diacylglycerol/lipid kinase family protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 613672..614556 . SNP-level association; inspect population structure before causal interpretation.
19 NC_017960.1_614575_G_A NC_017960.1_614575_G_A snp NC_017960.1 614575 G A NC_017960.1_614575_G_A intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
20 NC_017960.1_614582_G_T NC_017960.1_614582_G_T snp NC_017960.1 614582 G T NC_017960.1_614582_G_T intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
21 NC_017960.1_614584_G_A NC_017960.1_614584_G_A snp NC_017960.1 614584 G A NC_017960.1_614584_G_A intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
22 NC_017960.1_614722_G_A NC_017960.1_614722_G_A snp NC_017960.1 614722 G A NC_017960.1_614722_G_A intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
23 NC_017960.1_614723_G_C NC_017960.1_614723_G_C snp NC_017960.1 614723 G C NC_017960.1_614723_G_C intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
24 NC_017960.1_614729_G_A NC_017960.1_614729_G_A snp NC_017960.1 614729 G A NC_017960.1_614729_G_A intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
25 NC_017960.1_614739_A_T NC_017960.1_614739_A_T snp NC_017960.1 614739 A T NC_017960.1_614739_A_T intergenic_or_unannotated intergenic_or_unannotated 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap . SNP-level association; inspect population structure before causal interpretation.
26 NC_017960.1_614790_G_A NC_017960.1_614790_G_A snp NC_017960.1 614790 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
27 NC_017960.1_614874_A_G NC_017960.1_614874_A_G snp NC_017960.1 614874 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
28 NC_017960.1_614932_G_A NC_017960.1_614932_G_A snp NC_017960.1 614932 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
29 NC_017960.1_614956_T_C NC_017960.1_614956_T_C snp NC_017960.1 614956 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
30 NC_017960.1_614968_T_G NC_017960.1_614968_T_G snp NC_017960.1 614968 T G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
31 NC_017960.1_614979_A_C NC_017960.1_614979_A_C snp NC_017960.1 614979 A C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
32 NC_017960.1_615048_C_A NC_017960.1_615048_C_A snp NC_017960.1 615048 C A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
33 NC_017960.1_615051_C_T NC_017960.1_615051_C_T snp NC_017960.1 615051 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
34 NC_017960.1_615054_T_A NC_017960.1_615054_T_A snp NC_017960.1 615054 T A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
35 NC_017960.1_615057_C_T NC_017960.1_615057_C_T snp NC_017960.1 615057 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
36 NC_017960.1_615058_A_T NC_017960.1_615058_A_T snp NC_017960.1 615058 A T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
37 NC_017960.1_615063_C_T NC_017960.1_615063_C_T snp NC_017960.1 615063 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
38 NC_017960.1_615110_G_A NC_017960.1_615110_G_A snp NC_017960.1 615110 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
39 NC_017960.1_615137_A_G NC_017960.1_615137_A_G snp NC_017960.1 615137 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
40 NC_017960.1_615145_C_T NC_017960.1_615145_C_T snp NC_017960.1 615145 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
41 NC_017960.1_615148_A_T NC_017960.1_615148_A_T snp NC_017960.1 615148 A T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
42 NC_017960.1_615149_C_T NC_017960.1_615149_C_T snp NC_017960.1 615149 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
43 NC_017960.1_615151_G_A NC_017960.1_615151_G_A snp NC_017960.1 615151 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
44 NC_017960.1_615181_A_G NC_017960.1_615181_A_G snp NC_017960.1 615181 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
45 NC_017960.1_615190_A_G NC_017960.1_615190_A_G snp NC_017960.1 615190 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
46 NC_017960.1_615205_T_C NC_017960.1_615205_T_C snp NC_017960.1 615205 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
47 NC_017960.1_615214_T_C NC_017960.1_615214_T_C snp NC_017960.1 615214 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
48 NC_017960.1_615218_T_C NC_017960.1_615218_T_C snp NC_017960.1 615218 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
49 NC_017960.1_615220_C_T NC_017960.1_615220_C_T snp NC_017960.1 615220 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
50 NC_017960.1_615226_C_T NC_017960.1_615226_C_T snp NC_017960.1 615226 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
51 NC_017960.1_615241_C_T NC_017960.1_615241_C_T snp NC_017960.1 615241 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
52 NC_017960.1_615244_T_C NC_017960.1_615244_T_C snp NC_017960.1 615244 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
53 NC_017960.1_615247_T_C NC_017960.1_615247_T_C snp NC_017960.1 615247 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
54 NC_017960.1_615261_T_C NC_017960.1_615261_T_C snp NC_017960.1 615261 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
55 NC_017960.1_615280_C_T NC_017960.1_615280_C_T snp NC_017960.1 615280 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
56 NC_017960.1_615298_A_G NC_017960.1_615298_A_G snp NC_017960.1 615298 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
57 NC_017960.1_615301_T_A NC_017960.1_615301_T_A snp NC_017960.1 615301 T A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
58 NC_017960.1_615304_A_T NC_017960.1_615304_A_T snp NC_017960.1 615304 A T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
59 NC_017960.1_615316_A_G NC_017960.1_615316_A_G snp NC_017960.1 615316 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
60 NC_017960.1_615321_C_T NC_017960.1_615321_C_T snp NC_017960.1 615321 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
61 NC_017960.1_615362_A_T NC_017960.1_615362_A_T snp NC_017960.1 615362 A T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
62 NC_017960.1_615378_G_A NC_017960.1_615378_G_A snp NC_017960.1 615378 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
63 NC_017960.1_615424_T_C NC_017960.1_615424_T_C snp NC_017960.1 615424 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
64 NC_017960.1_615427_G_A NC_017960.1_615427_G_A snp NC_017960.1 615427 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
65 NC_017960.1_615436_G_T NC_017960.1_615436_G_T snp NC_017960.1 615436 G T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
66 NC_017960.1_615439_C_T NC_017960.1_615439_C_T snp NC_017960.1 615439 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
67 NC_017960.1_615448_A_C NC_017960.1_615448_A_C snp NC_017960.1 615448 A C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
68 NC_017960.1_615460_T_C NC_017960.1_615460_T_C snp NC_017960.1 615460 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
69 NC_017960.1_615499_G_A NC_017960.1_615499_G_A snp NC_017960.1 615499 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
70 NC_017960.1_615520_G_A NC_017960.1_615520_G_A snp NC_017960.1 615520 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
71 NC_017960.1_615526_A_G NC_017960.1_615526_A_G snp NC_017960.1 615526 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
72 NC_017960.1_615527_C_A NC_017960.1_615527_C_A snp NC_017960.1 615527 C A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
73 NC_017960.1_615550_C_T NC_017960.1_615550_C_T snp NC_017960.1 615550 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
74 NC_017960.1_615571_A_G NC_017960.1_615571_A_G snp NC_017960.1 615571 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
75 NC_017960.1_615572_T_C NC_017960.1_615572_T_C snp NC_017960.1 615572 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
76 NC_017960.1_615574_G_A NC_017960.1_615574_G_A snp NC_017960.1 615574 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
77 NC_017960.1_615580_G_A NC_017960.1_615580_G_A snp NC_017960.1 615580 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
78 NC_017960.1_615595_A_G NC_017960.1_615595_A_G snp NC_017960.1 615595 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
79 NC_017960.1_615607_G_A NC_017960.1_615607_G_A snp NC_017960.1 615607 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
80 NC_017960.1_615616_G_A NC_017960.1_615616_G_A snp NC_017960.1 615616 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
81 NC_017960.1_615625_C_T NC_017960.1_615625_C_T snp NC_017960.1 615625 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
82 NC_017960.1_615643_A_T NC_017960.1_615643_A_T snp NC_017960.1 615643 A T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
83 NC_017960.1_615652_T_G NC_017960.1_615652_T_G snp NC_017960.1 615652 T G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
84 NC_017960.1_615655_T_C NC_017960.1_615655_T_C snp NC_017960.1 615655 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
85 NC_017960.1_615670_G_A NC_017960.1_615670_G_A snp NC_017960.1 615670 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
86 NC_017960.1_615677_A_C NC_017960.1_615677_A_C snp NC_017960.1 615677 A C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
87 NC_017960.1_615688_A_G NC_017960.1_615688_A_G snp NC_017960.1 615688 A G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
88 NC_017960.1_615691_C_T NC_017960.1_615691_C_T snp NC_017960.1 615691 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
89 NC_017960.1_615712_T_C NC_017960.1_615712_T_C snp NC_017960.1 615712 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
90 NC_017960.1_615733_T_C NC_017960.1_615733_T_C snp NC_017960.1 615733 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
91 NC_017960.1_615751_A_T NC_017960.1_615751_A_T snp NC_017960.1 615751 A T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
92 NC_017960.1_615766_T_C NC_017960.1_615766_T_C snp NC_017960.1 615766 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
93 NC_017960.1_615769_T_G NC_017960.1_615769_T_G snp NC_017960.1 615769 T G HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
94 NC_017960.1_615777_T_C NC_017960.1_615777_T_C snp NC_017960.1 615777 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
95 NC_017960.1_615778_G_A NC_017960.1_615778_G_A snp NC_017960.1 615778 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
96 NC_017960.1_615793_T_C NC_017960.1_615793_T_C snp NC_017960.1 615793 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
97 NC_017960.1_615796_G_A NC_017960.1_615796_G_A snp NC_017960.1 615796 G A HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
98 NC_017960.1_615802_C_T NC_017960.1_615802_C_T snp NC_017960.1 615802 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
99 NC_017960.1_615838_T_C NC_017960.1_615838_T_C snp NC_017960.1 615838 T C HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.
100 NC_017960.1_615856_C_T NC_017960.1_615856_C_T snp NC_017960.1 615856 C T HMPREF0351_RS02915 Ig-like domain-containing protein HMPREF0351_RS02915 Ig-like domain-containing protein 0 50 0.0000 18 50 0.3600 controls (vancomycin sensitive) -4.99 0.0173936 0.001013-0.2987 0.00101275 0.29873 1.87e-08 7.7282 reference_GenBank_coordinate_overlap 614780..617947 . SNP-level association; inspect population structure before causal interpretation.

Showing 100 of 100 rows.

metric	value
snp_gwas_status	prioritized
pyseer_snp_rows	100138
ranked_snp_features	100138
significant_snp_features	9891
alpha	0.05
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06b Optional Gubbins recombination assessment

Brief interpretation: The recombination panel documents whether Gubbins was requested, whether filtering succeeded, and whether the SNP GWAS used the filtered or original VCF.
Recommendation: Gubbins is optional and is most useful for recombining bacterial species or datasets where recombinant blocks may inflate SNP associations. It is especially relevant for organisms such as Klebsiella pneumoniae, Escherichia coli, Salmonella, Streptococcus pneumoniae, Neisseria spp., and selected Acinetobacter datasets. For MTBC and other highly clonal organisms, keep it off by default unless there is a specific recombination or lineage-confounding question.
Requested
not requested
Run status
not run
Input SNP records
0
Filtered SNP records
0
Filtering note: Gubbins not run. When Gubbins is enabled and succeeds, SNP GWAS uses the Gubbins-filtered VCF. When it is skipped, unavailable, or fails softly, the original Snippy SNP VCF is used and the reason is recorded below.

Recombination intervals: 0. Output files: rMAP_GWAS_SNP_gubbins_summary.tsv, rMAP_GWAS_SNP_gubbins.filtered_polymorphic_sites.fasta, rMAP_GWAS_SNP_gubbins.recombination_predictions.gff, and rMAP_GWAS_SNP_gubbins.log.

metric	value
gubbins_status	not_run
recommendation	Optional. Enable for recombining bacteria or strong lineage/recombination concerns; usually not required as a default for MTBC/clonal analyses.
usage_note	Gubbins not requested. Primary SNP GWAS used the unfiltered Snippy/core VCF when SNP GWAS was enabled.
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07 Top priority gene presence/absence GWAS hits

Brief interpretation: The prioritized table ranks candidate gene presence/absence associations by statistical evidence, enrichment direction, effect size, and annotation support.
Rank 1
group_574
group_574 | HMPREF0351_RS07175 | none confidence | identity=27.75% | coverage=2.60%
none confidence

glycosyltransferase family 8 protein

enriched: cases (vancomycin resistant) | p=1.25e-09 | OR=86.3091
Rank 2
vanR-A
vanRA | HMPREF0351_RS08390 | none confidence | identity=36.23% | coverage=2.44%
none confidence

response regulator transcription factor

enriched: cases (vancomycin resistant) | p=2.18e-10 | OR=17.2334
Rank 3
vanH-A
vanHA | HMPREF0351_RS00080 | none confidence | identity=39.44% | coverage=0.93%
none confidence

HdeD family acid-resistance protein

enriched: cases (vancomycin resistant) | p=2.18e-10 | OR=17.2334
Rank 4
vanA
vanA | HMPREF0351_RS00070 | none confidence | identity=31.65% | coverage=0.97%
none confidence

DegV family protein

enriched: cases (vancomycin resistant) | p=2.18e-10 | OR=17.2334
Rank 5
vanS-A
vanSA | HMPREF0351_RS02250 | none confidence | identity=18.53% | coverage=1.31%
none confidence

cysteinyl-tRNA synthetase

enriched: cases (vancomycin resistant) | p=2.18e-10 | OR=17.2334

Prioritized hit table

rank feature id feature type display name display label gene name product reference locus tag reference gene reference product annotation confidence reference identity reference coverage interpretation note annotation evidence case (vancomycin resistant) present case (vancomycin resistant) total case (vancomycin resistant) frequency control (vancomycin sensitive) present control (vancomycin sensitive) total control (vancomycin sensitive) frequency enriched in beta odds ratio odds ratio ci95 odds ratio ci95 lower odds ratio ci95 upper pyseer pvalue q value priority score annotation source reference match type reference location annotation note cluster member ids notes display product
1 group_574 gene_presence_absence group_574 group_574 | HMPREF0351_RS07175 | none confidence group_574 Resolvase/invertase-type recombinase catalytic domain-containing protein HMPREF0351_RS07175 glycosyltransferase family 8 protein none 27.75 2.60 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.75; coverage=2.60 23 50 0.4600 0 50 0.0000 cases (vancomycin resistant) 4.55 86.3091 5.045-1476 5.04547 1476.42 1.25e-09 18.3345 Panaroo/Bakta+GenBank nucleotide_similarity complement(1472014..1472871) matched_representative_sequence=group_574 BCEGCL_02843;DJAJGG_02626;EAHGHC_02953;EBMNDJ_03056;FIOBDN_02756;FNLDHP_02960;GCGADK_02774;JAJEAH_01989;JGBMCF_02008;JJIELG_02219;KFIHCG_02687;LJIIAA_02678;LNBAGD_02918;MMOFNP_01988;NBNIPB_02296;NCCLJD_01978;NJLMCP_02780;ODBCAF_02702;ODHHNB_02694;OIGEFE_02003;OOIKMG_02684;OPKPKN_03009;PDKMDO_02745 glycosyltransferase family 8 protein
2 vanRA gene_presence_absence vanR-A vanRA | HMPREF0351_RS08390 | none confidence vanR-A vancomycin resistance response regulator transcription factor VanR-A HMPREF0351_RS08390 response regulator transcription factor none 36.23 2.44 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=36.23; coverage=2.44 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity complement(1724100..1724816) matched_representative_sequence=vanRA BBAPLL_02751;BCEGCL_02749;BODMBB_02748;DAGPJG_02803;DEFBHI_02705;DJAJGG_02628;DPGNPC_02801;EAHGHC_02773;EBMNDJ_02857;EMDJIL_02691;FAEPFC_02803;FIOBDN_02755;FNLDHP_02862;GBBODN_02750;GCGADK_02773;GJOFNM_02820;HLAPEO_02743;HOGLGD_02745;IAFNHG_02656;IIIHAF_02837;IPIGJP_02657;JAJEAH_01988;JGBMCF_02007;JHCCBL_02771;JJIELG_02220;KFIHCG_02685;KFKELN_02784;LJIIAA_02676;LKPDJB_02404;LNBAGD_02917 response regulator transcription factor
3 vanHA gene_presence_absence vanH-A vanHA | HMPREF0351_RS00080 | none confidence vanH-A D-lactate dehydrogenase VanH-A HMPREF0351_RS00080 HdeD family acid-resistance protein none 39.44 0.93 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=39.44; coverage=0.93 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 20045..20566 matched_representative_sequence=vanHA BBAPLL_02749;BCEGCL_02747;BODMBB_02746;DAGPJG_02801;DEFBHI_02707;DJAJGG_02630;DPGNPC_02799;EAHGHC_02771;EBMNDJ_02855;EMDJIL_02693;FAEPFC_02801;FIOBDN_02883;FNLDHP_02860;GBBODN_02752;GCGADK_02864;GJOFNM_02822;HLAPEO_02741;HOGLGD_02593;IAFNHG_02658;IIIHAF_02835;IPIGJP_02659;JAJEAH_01986;JGBMCF_02005;JHCCBL_02773;JJIELG_02222;KFIHCG_02683;KFKELN_02782;LJIIAA_02674;LKPDJB_02402;LNBAGD_02791 HdeD family acid-resistance protein
4 vanA gene_presence_absence vanA vanA | HMPREF0351_RS00070 | none confidence vanA D-alanine--(R)-lactate ligase VanA HMPREF0351_RS00070 DegV family protein none 31.65 0.97 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=31.65; coverage=0.97 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 17182..18045 matched_representative_sequence=vanA BBAPLL_02748;BCEGCL_02746;BODMBB_02745;DAGPJG_02800;DEFBHI_02708;DJAJGG_02631;DPGNPC_02798;EAHGHC_02770;EBMNDJ_02854;EMDJIL_02694;FAEPFC_02800;FIOBDN_02884;FNLDHP_02859;GBBODN_02753;GCGADK_02863;GJOFNM_02823;HLAPEO_02740;HOGLGD_02594;IAFNHG_02659;IIIHAF_02834;IPIGJP_02660;JAJEAH_01985;JGBMCF_02004;JHCCBL_02774;JJIELG_02223;KFIHCG_02682;KFKELN_02781;LJIIAA_02673;LKPDJB_02401;LNBAGD_02790 DegV family protein
5 vanSA gene_presence_absence vanS-A vanSA | HMPREF0351_RS02250 | none confidence vanS-A vancomycin resistance histidine kinase VanS-A HMPREF0351_RS02250 cysteinyl-tRNA synthetase none 18.53 1.31 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=18.53; coverage=1.31 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 472585..472833 matched_representative_sequence=vanSA BBAPLL_02750;BCEGCL_02748;BODMBB_02747;DAGPJG_02802;DEFBHI_02706;DJAJGG_02629;DPGNPC_02800;EAHGHC_02772;EBMNDJ_02856;EMDJIL_02692;FAEPFC_02802;FIOBDN_02754;FNLDHP_02861;GBBODN_02751;GCGADK_02772;GJOFNM_02821;HLAPEO_02742;HOGLGD_02746;IAFNHG_02657;IIIHAF_02836;IPIGJP_02658;JAJEAH_01987;JGBMCF_02006;JHCCBL_02772;JJIELG_02221;KFIHCG_02684;KFKELN_02783;LJIIAA_02675;LKPDJB_02403;LNBAGD_02916 cysteinyl-tRNA synthetase
6 vanXA gene_presence_absence vanX-A vanXA | HMPREF0351_RS00055 | none confidence vanX-A D-Ala-D-Ala dipeptidase VanX-A HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 38.98 1.64 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=38.98; coverage=1.64 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=vanXA BBAPLL_02747;BCEGCL_02745;BODMBB_02744;DAGPJG_02799;DEFBHI_02709;DJAJGG_02632;DPGNPC_02797;EAHGHC_02769;EBMNDJ_02853;EMDJIL_02695;FAEPFC_02799;FIOBDN_02885;FNLDHP_02858;GBBODN_02754;GCGADK_02862;GJOFNM_02824;HLAPEO_02739;HOGLGD_02595;IAFNHG_02660;IIIHAF_02833;IPIGJP_02661;JAJEAH_01984;JGBMCF_02003;JHCCBL_02775;JJIELG_02224;KFIHCG_02681;KFKELN_02780;LJIIAA_02672;LKPDJB_02400;LNBAGD_02789 50S ribosomal protein L9
7 group_1541 gene_presence_absence group_1541 group_1541 | HMPREF0351_RS07090 | none confidence group_1541 amino acid permease HMPREF0351_RS07090 amino acid permease none 29.08 89.71 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.08; coverage=89.71 25 50 0.5000 1 50 0.0200 cases (vancomycin resistant) 3.45 33 5.941-183.3 5.94096 183.304 4.74e-09 16.3686 Panaroo/Bakta+GenBank nucleotide_similarity complement(1458975..1460402) matched_representative_sequence=group_1541 BBAPLL_02698;BCEGCL_02733;CMDIKE_01107;DAGLGK_02662;DAGPJG_02643;DJAJGG_02666;DPGNPC_02771;EAHGHC_02700;EMDJIL_02643;FAEPFC_02782;FNLDHP_02844;GCGADK_00681;GLFBPE_02613;HLAPEO_02689;HOGLGD_02554;KFIHCG_02032;KFKELN_02740;LJIIAA_00732;LKPDJB_02460;MHHDHD_02606;NBNIPB_02513;NJLMCP_02810;ODBCAF_00558;OOIKMG_02715;OPKPKN_02730;PDKMDO_00553 amino acid permease
8 group_3535 gene_presence_absence group_3535 group_3535 | no_reference_locus | none confidence group_3535 hypothetical protein none No confident reference gene assignment; report the stable Panaroo cluster ID. no sequence identity/coverage evidence available 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta none No confident GenBank reference match found. The cluster may be accessory, divergent, absent from the reference, or not represented in Panaroo sequence outputs. BFAOAP_03116;BJKGBB_00688;DHOPGE_03087;DNHFDD_01026;GBBODN_02918;HKAALB_01385;IIIHAF_02779;JAOBDG_02874;JHCCBL_02914;KAOGPO_03087;MFDKLE_00890;NBICIC_02854;NHJIOO_01613;NPNGCM_01050;OFKADD_02962;PCBIPO_00771;PDOPEE_03164 hypothetical protein
9 group_2813 gene_presence_absence group_2813 group_2813 | HMPREF0351_RS00080 | none confidence group_2813 5-deoxy-glucuronate isomerase HMPREF0351_RS00080 HdeD family acid-resistance protein none 27.62 0.97 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.62; coverage=0.97 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 20045..20566 matched_representative_sequence=group_2813 BFAOAP_02957;BJKGBB_00692;DHOPGE_02905;DNHFDD_01030;GBBODN_02729;HKAALB_01389;IIIHAF_02775;JAOBDG_02688;JHCCBL_02753;KAOGPO_02979;MFDKLE_00886;NBICIC_02694;NHJIOO_02725;NPNGCM_01054;OFKADD_02802;PCBIPO_00777;PDOPEE_02980 HdeD family acid-resistance protein
10 group_2654 gene_presence_absence dnaN group_2654 | HMPREF0351_RS00010 | none confidence dnaN Inosose dehydratase HMPREF0351_RS00010 dnaN DNA polymerase III subunit beta none 36.60 1.12 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=36.60; coverage=1.12 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 1603..2733 matched_representative_sequence=group_2654 BFAOAP_01862;BJKGBB_01790;DHOPGE_01828;DNHFDD_02443;GBBODN_01870;HKAALB_01490;IIIHAF_01865;JAOBDG_01653;JHCCBL_01794;KAOGPO_01785;MFDKLE_02472;NBICIC_01586;NHJIOO_01728;NPNGCM_02491;OFKADD_01640;PCBIPO_01831;PDOPEE_01804 DNA polymerase III subunit beta
11 group_2392 gene_presence_absence dnaN group_2392 | HMPREF0351_RS00010 | none confidence dnaN Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase HMPREF0351_RS00010 dnaN DNA polymerase III subunit beta none 32.35 1.09 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=32.35; coverage=1.09 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 1603..2733 matched_representative_sequence=group_2392 BFAOAP_01860;BJKGBB_01792;DHOPGE_01826;DNHFDD_02441;GBBODN_01868;HKAALB_01492;IIIHAF_01863;JAOBDG_01651;JHCCBL_01796;KAOGPO_01787;MFDKLE_02470;NBICIC_01584;NHJIOO_01726;NPNGCM_02489;OFKADD_01642;PCBIPO_01833;PDOPEE_01806 DNA polymerase III subunit beta
12 group_2358 gene_presence_absence lacI group_2358 | HMPREF0351_RS00005 | none confidence lacI LacI family transcriptional regulator HMPREF0351_RS00005 dnaA chromosomal replication initiator protein DnaA none 35.20 1.18 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=35.20; coverage=1.18 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 71..1405 matched_representative_sequence=group_2358 BFAOAP_02954;BJKGBB_00689;DHOPGE_02908;DNHFDD_01027;GBBODN_02732;HKAALB_01386;IIIHAF_02778;JAOBDG_02685;JHCCBL_02756;KAOGPO_03057;MFDKLE_00889;NBICIC_02697;NHJIOO_02728;NPNGCM_01051;OFKADD_02805;PCBIPO_00774;PDOPEE_02983 chromosomal replication initiator protein DnaA
13 group_2336 gene_presence_absence recF group_2336 | HMPREF0351_RS00020 | none confidence recF Myo-inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase HMPREF0351_RS00020 recF DNA replication/repair protein RecF none 38.59 0.97 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=38.59; coverage=0.97 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 3191..4315 matched_representative_sequence=group_2336 BFAOAP_01861;BJKGBB_01791;DHOPGE_01827;DNHFDD_02442;GBBODN_01869;HKAALB_01491;IIIHAF_01864;JAOBDG_01652;JHCCBL_01795;KAOGPO_01786;MFDKLE_02471;NBICIC_01585;NHJIOO_01727;NPNGCM_02490;OFKADD_01641;PCBIPO_01832;PDOPEE_01805 DNA replication/repair protein RecF
14 group_2304 gene_presence_absence group_2304 group_2304 | HMPREF0351_RS04595 | none confidence group_2304 5-dehydro-2-deoxygluconokinase HMPREF0351_RS04595 NAD(P)-dependent oxidoreductase none 29.54 1.64 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.54; coverage=1.64 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 942492..943379 matched_representative_sequence=group_2304 BFAOAP_02955;BJKGBB_00690;DHOPGE_02907;DNHFDD_01028;GBBODN_02731;HKAALB_01387;IIIHAF_02777;JAOBDG_02686;JHCCBL_02755;KAOGPO_02977;MFDKLE_00888;NBICIC_02696;NHJIOO_02727;NPNGCM_01052;OFKADD_02804;PCBIPO_00775;PDOPEE_02982 NAD(P)-dependent oxidoreductase
15 group_2013 gene_presence_absence group_2013 group_2013 | HMPREF0351_RS00065 | none confidence group_2013 Iron-containing alcohol dehydrogenase HMPREF0351_RS00065 adenylosuccinate synthase none 33.17 0.86 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.17; coverage=0.86 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 15103..16395 matched_representative_sequence=group_2013 BFAOAP_01859;BJKGBB_01793;DHOPGE_01825;DNHFDD_02440;GBBODN_01867;HKAALB_01493;IIIHAF_01862;JAOBDG_01650;JHCCBL_01797;KAOGPO_01788;MFDKLE_02469;NBICIC_01583;NHJIOO_01725;NPNGCM_02488;OFKADD_01643;PCBIPO_01834;PDOPEE_01807 adenylosuccinate synthase
16 yidK gene_presence_absence yidK yidK | HMPREF0351_RS07790 | none confidence yidK Putative symporter YidK HMPREF0351_RS07790 RDD family protein none 23.85 1.13 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=23.85; coverage=1.13 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity complement(1595717..1596376) matched_representative_sequence=yidK BFAOAP_01863;BJKGBB_01789;DHOPGE_01829;DNHFDD_02444;GBBODN_01871;HKAALB_01489;IIIHAF_01866;JAOBDG_01654;JHCCBL_01793;KAOGPO_01784;MFDKLE_02473;NBICIC_01587;NHJIOO_01729;NPNGCM_02492;OFKADD_01639;PCBIPO_01830;PDOPEE_01803 RDD family protein
17 group_680 gene_presence_absence group_680 group_680 | HMPREF0351_RS01545 | none confidence group_680 PTS EIIB type-3 domain-containing protein HMPREF0351_RS01545 PTS sugar transporter subunit IIB none 42.77 4.76 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=42.77; coverage=4.76 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 313977..314297 matched_representative_sequence=group_680 BFAOAP_01864;BJKGBB_01788;DHOPGE_01830;DNHFDD_02445;GBBODN_01872;HKAALB_01488;IIIHAF_01867;JAOBDG_01655;JHCCBL_01792;KAOGPO_01783;MFDKLE_02474;NBICIC_01588;NHJIOO_01730;NPNGCM_02493;OFKADD_01638;PCBIPO_01829;PDOPEE_01802 PTS sugar transporter subunit IIB
18 group_502 gene_presence_absence group_502 group_502 | HMPREF0351_RS00090 | none confidence group_502 3D-(35/4)-trihydroxycyclohexane-12-dione hydrolase HMPREF0351_RS00090 ZIP family metal transporter none 27.12 0.63 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.12; coverage=0.63 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 22647..23465 matched_representative_sequence=group_502 BFAOAP_02956;BJKGBB_00691;DHOPGE_02906;DNHFDD_01029;GBBODN_02730;HKAALB_01388;IIIHAF_02776;JAOBDG_02687;JHCCBL_02754;KAOGPO_02978;MFDKLE_00887;NBICIC_02695;NHJIOO_02726;NPNGCM_01053;OFKADD_02803;PCBIPO_00776;PDOPEE_02981 ZIP family metal transporter
19 group_4436 gene_presence_absence group_4436 group_4436 | HMPREF0351_RS00745 | none confidence group_4436 Phosphonate ABC transporter ATP-binding protein HMPREF0351_RS00745 amino acid ABC transporter ATP-binding protein none 35.36 1.89 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=35.36; coverage=1.89 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity complement(149190..149930) matched_representative_sequence=group_4436 BFAOAP_02781;DAGPJG_02041;DHOPGE_02664;DNHFDD_02643;FBIILI_02572;GJOFNM_02639;HKAALB_02601;JAOBDG_02495;KAOGPO_02724;MFDKLE_02578;NBICIC_02485;NHJIOO_02535;NPNGCM_02696;OFKADD_02516;PCBIPO_02662;PDOPEE_02750;POKLJE_01911 amino acid ABC transporter ATP-binding protein
20 group_4435 gene_presence_absence frr group_4435 | HMPREF0351_RS08075 | none confidence frr ribosome recycling factor HMPREF0351_RS08075 frr ribosome recycling factor none 30.27 2.49 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=30.27; coverage=2.49 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity complement(1662402..1662959) matched_representative_sequence=group_4435 BFAOAP_02783;DAGPJG_02043;DHOPGE_02666;DNHFDD_02641;FBIILI_02570;GJOFNM_02641;HKAALB_02603;JAOBDG_02492;JAOBDG_02493;KAOGPO_02722;MFDKLE_02580;NBICIC_02487;NHJIOO_02537;NHJIOO_02538;NPNGCM_02698;OFKADD_02514;PCBIPO_02660;PDOPEE_02752;POKLJE_01913 ribosome recycling factor
21 group_4434 gene_presence_absence rplI group_4434 | HMPREF0351_RS00055 | none confidence rplI Bifunctional metallophosphatase/5'-nucleotidase HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 30.38 0.71 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=30.38; coverage=0.71 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=group_4434 BFAOAP_02777;DAGPJG_02037;DHOPGE_02660;DNHFDD_02647;FBIILI_02576;GJOFNM_02635;HKAALB_02597;JAOBDG_02499;KAOGPO_02728;MFDKLE_02574;NBICIC_02481;NHJIOO_02531;NPNGCM_02692;OFKADD_02520;PCBIPO_02666;PDOPEE_02746;POKLJE_01907 50S ribosomal protein L9
22 group_4433 gene_presence_absence phnE group_4433 | HMPREF0351_RS02580 | none confidence phnE Phosphonate ABC transporter permease PhnE HMPREF0351_RS02580 5'-methylthioadenosine/adenosylhomocysteinenucleosidase none 28.32 2.04 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=28.32; coverage=2.04 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 539268..539960 matched_representative_sequence=group_4433 BFAOAP_02779;DAGPJG_02039;DHOPGE_02662;DNHFDD_02645;FBIILI_02574;GJOFNM_02637;HKAALB_02599;JAOBDG_02497;KAOGPO_02726;MFDKLE_02576;NBICIC_02483;NHJIOO_02533;NPNGCM_02694;OFKADD_02518;PCBIPO_02664;PDOPEE_02748;POKLJE_01909 5'-methylthioadenosine/adenosylhomocysteinenucleosidase
23 phnE gene_presence_absence phnE phnE | HMPREF0351_RS00100 | none confidence phnE Phosphonate ABC transporter permease PhnE HMPREF0351_RS00100 TMEM175 family protein none 40.32 1.41 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=40.32; coverage=1.41 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 23934..24512 matched_representative_sequence=phnE BFAOAP_02780;DAGPJG_02040;DHOPGE_02663;DNHFDD_02644;FBIILI_02573;GJOFNM_02638;HKAALB_02600;JAOBDG_02496;KAOGPO_02725;MFDKLE_02577;NBICIC_02484;NHJIOO_02534;NPNGCM_02695;OFKADD_02517;PCBIPO_02663;PDOPEE_02749;POKLJE_01910 TMEM175 family protein
24 group_4432 gene_presence_absence group_4432 group_4432 | HMPREF0351_RS10960 | none confidence group_4432 Mur ligase family protein HMPREF0351_RS10960 Mur ligase family protein none 15.34 8.08 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=15.34; coverage=8.08 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 2246582..2247934 matched_representative_sequence=group_4432 BFAOAP_02776;DAGPJG_02036;DHOPGE_02659;DNHFDD_02648;FBIILI_02577;GJOFNM_02634;HKAALB_02596;JAOBDG_02500;KAOGPO_02729;MFDKLE_02573;NBICIC_02480;NHJIOO_02530;NPNGCM_02691;OFKADD_02521;PCBIPO_02667;PDOPEE_02745;POKLJE_01906 Mur ligase family protein
25 group_4431 gene_presence_absence group_4431 group_4431 | HMPREF0351_RS04215 | none confidence group_4431 aminopeptidase HMPREF0351_RS04215 aminopeptidase none 22.57 1.53 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=22.57; coverage=1.53 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity complement(861608..862840) matched_representative_sequence=group_4431 BFAOAP_02784;DAGPJG_02044;DHOPGE_02667;DNHFDD_02640;FBIILI_02569;GJOFNM_02642;HKAALB_02604;JAOBDG_02491;KAOGPO_02721;MFDKLE_02581;NBICIC_02488;NHJIOO_02539;NPNGCM_02699;OFKADD_02513;PCBIPO_02659;PDOPEE_02753;POKLJE_01914 aminopeptidase
26 group_4430 gene_presence_absence group_4430 group_4430 | HMPREF0351_RS00115 | none confidence group_4430 Solute-binding protein family 3/N-terminal domain-containing protein HMPREF0351_RS00115 acyltransferase domain-containing protein none 36.15 1.08 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=36.15; coverage=1.08 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 27767..28645 matched_representative_sequence=group_4430 BFAOAP_02782;DAGPJG_02042;DHOPGE_02665;DNHFDD_02642;FBIILI_02571;GJOFNM_02640;HKAALB_02602;JAOBDG_02494;KAOGPO_02723;MFDKLE_02579;NBICIC_02486;NHJIOO_02536;NPNGCM_02697;OFKADD_02515;PCBIPO_02661;PDOPEE_02751;POKLJE_01912 acyltransferase domain-containing protein
27 group_4429 gene_presence_absence group_4429 group_4429 | HMPREF0351_RS01465 | none confidence group_4429 Transposase;Transposase IS204/IS1001/IS1096/IS1165 DDE domain-containing protein HMPREF0351_RS01465 ISL3 family transposase none 97.45 17.52 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=97.45; coverage=17.52 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 293413..294708 matched_representative_sequence=group_4429 BFAOAP_02775;DAGPJG_02035;DHOPGE_02658;DNHFDD_02649;FBIILI_02578;GJOFNM_02633;HKAALB_02595;JAOBDG_02501;KAOGPO_02730;MFDKLE_02572;NBICIC_02479;NHJIOO_02529;NPNGCM_02690;OFKADD_02522;PCBIPO_02668;PDOPEE_02744;POKLJE_01905 ISL3 family transposase
28 group_4428 gene_presence_absence rplI group_4428 | HMPREF0351_RS00055 | none confidence rplI putative phosphohydrolases HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 35.16 1.24 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=35.16; coverage=1.24 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=group_4428 BFAOAP_02778;DAGPJG_02038;DHOPGE_02661;DNHFDD_02646;FBIILI_02575;GJOFNM_02636;HKAALB_02598;JAOBDG_02498;KAOGPO_02727;MFDKLE_02575;NBICIC_02482;NHJIOO_02532;NPNGCM_02693;OFKADD_02519;PCBIPO_02665;PDOPEE_02747;POKLJE_01908 50S ribosomal protein L9
29 group_3344 gene_presence_absence group_3344 group_3344 | HMPREF0351_RS01300 | none confidence group_3344 Restriction endonuclease;site-specific DNA-methyltransferase (adenine-specific) HMPREF0351_RS01300 hypothetical protein none 19.04 0.44 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=19.04; coverage=0.44 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity complement(262819..264018) matched_representative_sequence=group_3344 BFAOAP_02088;DAGPJG_02072;DHOPGE_01930;DNHFDD_01925;FBIILI_01795;GJOFNM_02269;HKAALB_01983;JAOBDG_02037;KAOGPO_02121;MFDKLE_02288;NBICIC_02081;NHJIOO_02003;NPNGCM_01940;NPNGCM_01941;OFKADD_01864;PCBIPO_01973;PDOPEE_01998 hypothetical protein
30 group_3240 gene_presence_absence group_3240 group_3240 | HMPREF0351_RS06620 | none confidence group_3240 DUF1788 domain-containing protein HMPREF0351_RS06620 ABC transporter ATP-binding protein none 29.25 3.12 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.25; coverage=3.12 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity 1355024..1355794 matched_representative_sequence=group_3240 BFAOAP_02090;DAGPJG_02070;DHOPGE_01932;DNHFDD_01923;FBIILI_01797;GJOFNM_02267;HKAALB_01981;JAOBDG_02039;KAOGPO_02123;MFDKLE_02290;NBICIC_02681;NHJIOO_02005;NPNGCM_01943;OFKADD_01866;PCBIPO_01971;PDOPEE_01996 ABC transporter ATP-binding protein
31 group_3198 gene_presence_absence group_3198 group_3198 | HMPREF0351_RS00100 | none confidence group_3198 DUF1819 domain-containing protein HMPREF0351_RS00100 TMEM175 family protein none 41.05 1.50 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=41.05; coverage=1.50 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity 23934..24512 matched_representative_sequence=group_3198 BFAOAP_02091;DAGPJG_02069;DHOPGE_01933;DNHFDD_01922;FBIILI_01798;GJOFNM_02266;HKAALB_01980;JAOBDG_02040;KAOGPO_02124;MFDKLE_02291;NBICIC_02680;NHJIOO_02006;NPNGCM_01944;OFKADD_01867;PCBIPO_01970;PDOPEE_01995 TMEM175 family protein
32 brxL gene_presence_absence brxL brxL | HMPREF0351_RS00575 | none confidence brxL BREX system Lon protease-like protein BrxL HMPREF0351_RS00575 WxLIP family cell surface protein none 12.77 0.74 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=12.77; coverage=0.74 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity 114540..115637 matched_representative_sequence=brxL BFAOAP_02086;DAGPJG_02074;DHOPGE_01928;DNHFDD_01927;FBIILI_01793;GJOFNM_02271;HKAALB_01985;JAOBDG_02035;KAOGPO_02119;MFDKLE_02286;NBICIC_02083;NHJIOO_02001;NPNGCM_01938;OFKADD_01862;PCBIPO_01975;PDOPEE_02000 WxLIP family cell surface protein
33 group_154 gene_presence_absence HMPREF0351_RS08435 (group_154) group_154 | HMPREF0351_RS08435 | high confidence group_154 TIGR02687 family protein HMPREF0351_RS08435 hypothetical protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 1731559..1731798 matched_representative_sequence=group_1548 BFAOAP_02087;DAGPJG_02073;DHOPGE_01929;DNHFDD_01926;FBIILI_01794;GJOFNM_02270;HKAALB_01984;JAOBDG_02036;KAOGPO_02120;MFDKLE_02287;NBICIC_02082;NHJIOO_02002;NPNGCM_01939;OFKADD_01863;PCBIPO_01974;PDOPEE_01999 hypothetical protein
34 group_22 gene_presence_absence HMPREF0351_RS14940 (group_22) group_22 | HMPREF0351_RS14940 | high confidence group_22 hypothetical protein HMPREF0351_RS14940 hypothetical protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_exact_or_contained complement(820799..820963) matched_representative_sequence=group_2277 BFAOAP_02089;DAGPJG_02071;DHOPGE_01931;DNHFDD_01924;FBIILI_01796;GJOFNM_02268;HKAALB_01982;JAOBDG_02038;KAOGPO_02122;MFDKLE_02289;NBICIC_02682;NHJIOO_02004;NPNGCM_01942;OFKADD_01865;PCBIPO_01972;PDOPEE_01997 hypothetical protein
35 group_1089 gene_presence_absence group_1089 group_1089 | HMPREF0351_RS00115 | none confidence group_1089 methylmalonate-semialdehyde dehydrogenase (CoA acylating) HMPREF0351_RS00115 acyltransferase domain-containing protein none 32.13 0.76 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.13; coverage=0.76 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.54 0.0207021 0.001202-0.3567 0.00120151 0.356698 1.52e-07 15.4122 Panaroo/Bakta+GenBank nucleotide_similarity 27767..28645 matched_representative_sequence=group_1089 BFAOAP_01858;DHOPGE_01824;DNHFDD_02439;GBBODN_01866;HKAALB_01494;IIIHAF_01861;JAOBDG_01649;JHCCBL_01798;KAOGPO_01789;MFDKLE_02468;NBICIC_01582;NHJIOO_01724;NPNGCM_02487;OFKADD_01644;PCBIPO_01835;PDOPEE_01808 acyltransferase domain-containing protein
36 group_507 gene_presence_absence group_507 group_507 | HMPREF0351_RS00590 | none confidence group_507 HTH arsR-type domain-containing protein HMPREF0351_RS00590 hypothetical protein none 32.17 5.15 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.17; coverage=5.15 17 50 0.3400 0 50 0.0000 cases (vancomycin resistant) 3.93 52.7612 3.068-907.5 3.06753 907.486 7.43e-07 14.8504 Panaroo/Bakta+GenBank nucleotide_similarity 117803..118759 matched_representative_sequence=group_507 EAHGHC_02516;EBMNDJ_02628;EMDJIL_02473;FIOBDN_02840;FNLDHP_02912;GCGADK_02812;HOGLGD_02598;KFIHCG_02585;LKPDJB_02397;MHHDHD_02725;NBNIPB_02288;NJLMCP_02696;ODBCAF_02632;ODHHNB_02742;OOIKMG_02607;OPKPKN_02932;PDKMDO_02784 hypothetical protein
37 group_3842 gene_presence_absence HMPREF0351_RS02895 (group_3842) group_3842 | HMPREF0351_RS02895 | high confidence group_3842 Bacteriocin HMPREF0351_RS02895 hypothetical protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 49 50 0.9800 28 50 0.5600 cases (vancomycin resistant) 3.46 26.0526 4.684-144.9 4.68446 144.892 9.14e-08 14.7424 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 611127..611555 matched_representative_sequence=group_3842 AAEDFP_02838;AKJFEH_02577;BBAPLL_02494;BCEGCL_02464;BIDKHD_01716;BJIIEG_00003;BJKGBB_02048;BNFCCO_00292;BOPMCK_00608;BPDKHC_02170;CDPMCH_02369;CHGPCO_02468;CMDIKE_00358;CMNCGK_02305;COMFNP_00004;DAGLGK_00386;DEFBHI_00687;DFLILH_00483;DJAJGG_00635;DNAMMH_00975;DPGNPC_00329;EAHGHC_02453;EBMNDJ_00370;EDPIJB_02525;EJLAKB_00361;EMDJIL_02418;FAEPFC_00236;FIOBDN_00123;FNLDHP_02727;FOJCEI_00139 hypothetical protein
38 group_2907 gene_presence_absence group_2907 group_2907 | HMPREF0351_RS10780 | none confidence group_2907 Metallo-beta-lactamase domain-containing protein HMPREF0351_RS10780 ABC transporter ATP-binding protein none 24.84 2.06 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=24.84; coverage=2.06 5 50 0.1000 26 50 0.5200 controls (vancomycin sensitive) -4.2 0.111756 0.03944-0.3166 0.0394425 0.316649 2.85e-09 14.7067 Panaroo/Bakta+GenBank nucleotide_similarity complement(2209957..2210910) matched_representative_sequence=group_2907 AAEDFP_00581;BFAOAP_00108;BIDKHD_00681;BNFCCO_01311;COMFNP_00696;DAGPJG_01847;DHOPGE_00211;DNAMMH_03006;DNHFDD_00108;EJLAKB_01154;FABDMP_01956;FBIILI_02823;FMBLNF_01918;GEMMFG_01106;GJOFNM_00754;HKAALB_02136;IGDGNK_00882;JABKKB_00780;JAOBDG_00877;JFOMPD_00679;KAOGPO_02016;MBMNML_00745;MFDKLE_00222;NBBOMM_01556;NBICIC_00640;NHJIOO_02857;NPDFDF_01328;NPNGCM_00101;OFKADD_00622;PCBIPO_00222 ABC transporter ATP-binding protein
39 group_3039 gene_presence_absence group_3039 group_3039 | HMPREF0351_RS08650 | none confidence group_3039 Ribitol-5-phosphate cytidylyltransferase HMPREF0351_RS08650 IS3 family transposase none 30.33 2.14 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=30.33; coverage=2.14 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.36 0.0249232 0.00144-0.4314 0.00143991 0.431393 8.4e-07 14.4021 Panaroo/Bakta+GenBank nucleotide_similarity complement(join(1770080..1770966,1770966..1771242)) matched_representative_sequence=group_3039 AKJFEH_02605;BJIIEG_01972;BPDKHC_02577;CDPMCH_02069;CMNCGK_02015;EDPIJB_02007;FBIILI_02004;FOJCEI_02183;GBBODN_02613;GEMMFG_01006;HBFAPG_01961;JHCCBL_02519;JJJGHN_02031;MECBCD_01923 IS3 family transposase
40 group_569 gene_presence_absence group_569 group_569 | HMPREF0351_RS06800 | none confidence group_569 LicD/FKTN/FKRP nucleotidyltransferase domain-containing protein HMPREF0351_RS06800 DUF6530 family protein none 18.44 1.83 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=18.44; coverage=1.83 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.36 0.0249232 0.00144-0.4314 0.00143991 0.431393 8.4e-07 14.4021 Panaroo/Bakta+GenBank nucleotide_similarity complement(1400022..1400501) matched_representative_sequence=group_569 AKJFEH_02606;BJIIEG_01973;BPDKHC_02578;CDPMCH_02068;CMNCGK_02016;EDPIJB_02008;FBIILI_02005;FOJCEI_02184;GBBODN_02612;GEMMFG_01005;HBFAPG_01962;JHCCBL_02520;JJJGHN_02030;MECBCD_01922 DUF6530 family protein
41 group_568 gene_presence_absence group_568 group_568 | HMPREF0351_RS10645 | none confidence group_568 NAD-dependent epimerase/dehydratase domain-containing protein HMPREF0351_RS10645 SIS domain-containing protein none 25.43 1.40 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=25.43; coverage=1.40 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.36 0.0249232 0.00144-0.4314 0.00143991 0.431393 8.4e-07 14.4021 Panaroo/Bakta+GenBank nucleotide_similarity complement(2179811..2180425) matched_representative_sequence=group_568 AKJFEH_02604;BJIIEG_01971;BPDKHC_02576;CDPMCH_02070;CMNCGK_02014;EDPIJB_02006;FBIILI_02003;FOJCEI_02182;GBBODN_02614;GEMMFG_01007;HBFAPG_01960;JHCCBL_02518;JJJGHN_02032;MECBCD_01924 SIS domain-containing protein
42 group_820 gene_presence_absence group_820 group_820 | HMPREF0351_RS05415 | none confidence group_820 hypothetical protein;Type II toxin-antitoxin system RelE/ParE family toxin HMPREF0351_RS05415 hypothetical protein none 28.37 5.90 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=28.37; coverage=5.90 16 50 0.3200 0 50 0.0000 cases (vancomycin resistant) 3.84 48.3043 2.803-832.3 2.80349 832.287 1.86e-06 14.3246 Panaroo/Bakta+GenBank nucleotide_similarity 1105471..1105746 matched_representative_sequence=group_820 EAHGHC_02518;EBMNDJ_02630;EMDJIL_02471;FIOBDN_02842;FNLDHP_02914;GCGADK_02810;HOGLGD_02600;KFIHCG_02587;LKPDJB_02395;MHHDHD_02723;NBNIPB_02286;NJLMCP_02698;ODBCAF_02634;ODHHNB_02740;OOIKMG_02609;PDKMDO_02786 hypothetical protein
43 group_508 gene_presence_absence abrB group_508 | HMPREF0351_RS00825 | none confidence abrB AbrB family transcriptional regulator HMPREF0351_RS00825 YjjG family noncanonical pyrimidinenucleotidase none 30.02 4.55 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=30.02; coverage=4.55 16 50 0.3200 0 50 0.0000 cases (vancomycin resistant) 3.84 48.3043 2.803-832.3 2.80349 832.287 1.86e-06 14.3246 Panaroo/Bakta+GenBank nucleotide_similarity 166745..167440 matched_representative_sequence=group_508 EAHGHC_02517;EBMNDJ_02629;EMDJIL_02472;FIOBDN_02841;FNLDHP_02913;GCGADK_02811;HOGLGD_02599;KFIHCG_02586;LKPDJB_02396;MHHDHD_02724;NBNIPB_02287;NJLMCP_02697;ODBCAF_02633;ODHHNB_02741;OOIKMG_02608;PDKMDO_02785 YjjG family noncanonical pyrimidinenucleotidase
44 group_280 gene_presence_absence trxA group_280 | HMPREF0351_RS09985 | high confidence trxA Type I restriction enzyme endonuclease subunit;hypothetical protein HMPREF0351_RS09985 trxA thioredoxin high 100.00 100.00 High-confidence GenBank-supported annotation. identity=100.00; coverage=100.00 48 50 0.9600 28 50 0.5600 cases (vancomycin resistant) 3.65 15.3158 3.83-61.25 3.82955 61.2536 6.08e-08 14.1530 Panaroo/Bakta+GenBank nucleotide_exact_or_contained complement(2047692..2048006) matched_representative_sequence=group_2803 12_refound_188_pseudo;14_refound_210_pseudo;19_refound_285_pseudo;21_refound_312_pseudo;22_refound_319_pseudo;23_refound_332_pseudo;26_refound_374_pseudo;28_refound_395_pseudo;31_refound_444_pseudo;BBAPLL_02490;BCEGCL_02460;BJIIEG_00457;BJKGBB_02044;BNFCCO_02964;BOPMCK_00612;CHGPCO_02295;CMDIKE_02842;DAGLGK_01960;DJAJGG_02685;DNAMMH_02926;DPGNPC_02023;EAHGHC_02449;EBMNDJ_00898;EMDJIL_02414;FABDMP_01806;FAEPFC_02079;FIOBDN_02082;FMBLNF_01815;FNLDHP_02723;FOJCEI_02823 thioredoxin
45 group_71 gene_presence_absence HMPREF0351_RS09930 (group_71) group_71 | HMPREF0351_RS09930 | high confidence group_71 V-type ATP synthase subunit F HMPREF0351_RS09930 V-type ATP synthase subunit F high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.14 0.0249232 0.00144-0.4314 0.00143991 0.431393 2.19e-06 13.9859 Panaroo/Bakta+GenBank nucleotide_exact_or_contained complement(2035299..2035610) matched_representative_sequence=group_717 BFAOAP_01505;CDPMCH_01825;DHOPGE_01941;DNHFDD_01768;FBIILI_02395;HKAALB_01880;JAOBDG_01175;MFDKLE_01687;NBICIC_01547;NHJIOO_01624;NPNGCM_01737;OFKADD_01696;PCBIPO_01708;PDOPEE_01746 V-type ATP synthase subunit F
46 group_4193 gene_presence_absence mreD group_4193 | HMPREF0351_RS12305 | none confidence mreD Transposase IS204/IS1001/IS1096/IS1165 DDE domain-containing protein HMPREF0351_RS12305 mreD rod shape-determining protein MreD none 36.99 4.37 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=36.99; coverage=4.37 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(2540070..2540579) matched_representative_sequence=group_4193 AKJFEH_02651;BPDKHC_02452;CDPMCH_02661;CMNCGK_02567;EDPIJB_02552;FABDMP_02462;FMBLNF_02490;GBBODN_02539;HBFAPG_02510;JHCCBL_02542;JJJGHN_02594;MECBCD_02486;NBBOMM_02474 rod shape-determining protein MreD
47 group_4192 gene_presence_absence rnmV group_4192 | HMPREF0351_RS10740 | none confidence rnmV Phosphotransferase system EIIB component type 2/3 domain-containing protein HMPREF0351_RS10740 rnmV ribonuclease M5 none 29.00 4.90 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=29.00; coverage=4.90 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(2201122..2201691) matched_representative_sequence=group_4192 AKJFEH_02647;BPDKHC_02456;CDPMCH_02665;CMNCGK_02571;EDPIJB_02556;FABDMP_02466;FMBLNF_02486;GBBODN_02535;HBFAPG_02506;JHCCBL_02546;JJJGHN_02590;MECBCD_02490;NBBOMM_02478 ribonuclease M5
48 group_4191 gene_presence_absence spxB group_4191 | HMPREF0351_RS00085 | none confidence spxB pyruvate oxidase HMPREF0351_RS00085 spxB pyruvate oxidase none 27.53 0.57 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=27.53; coverage=0.57 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(20752..22482) matched_representative_sequence=group_4191 AKJFEH_02644;BPDKHC_02459;CDPMCH_02668;CMNCGK_02574;EDPIJB_02559;FABDMP_02469;FMBLNF_02483;GBBODN_02532;HBFAPG_02503;JHCCBL_02549;JJJGHN_02587;MECBCD_02493;NBBOMM_02481 pyruvate oxidase
49 group_4190 gene_presence_absence group_4190 group_4190 | HMPREF0351_RS00120 | none confidence group_4190 putative metal homeostasis protein HMPREF0351_RS00120 putative metal homeostasis protein none 45.41 7.78 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=45.41; coverage=7.78 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 29121..29237 matched_representative_sequence=group_4190 AKJFEH_02642;BPDKHC_02461;CDPMCH_02670;CMNCGK_02576;EDPIJB_02561;FABDMP_02471;FMBLNF_02481;GBBODN_02530;HBFAPG_02501;JHCCBL_02551;JJJGHN_02585;MECBCD_02495;NBBOMM_02483 putative metal homeostasis protein
50 group_4189 gene_presence_absence yaaA group_4189 | HMPREF0351_RS00015 | none confidence yaaA S4 domain-containing protein YaaA HMPREF0351_RS00015 yaaA S4 domain-containing protein YaaA none 46.62 7.53 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=46.62; coverage=7.53 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 2962..3204 matched_representative_sequence=group_4189 AKJFEH_02643;BPDKHC_02460;CDPMCH_02669;CMNCGK_02575;EDPIJB_02560;FABDMP_02470;FMBLNF_02482;GBBODN_02531;HBFAPG_02502;JHCCBL_02550;JJJGHN_02586;MECBCD_02494;NBBOMM_02482 S4 domain-containing protein YaaA
51 group_4188 gene_presence_absence group_4188 group_4188 | HMPREF0351_RS09540 | none confidence group_4188 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase HMPREF0351_RS09540 YtxH domain-containing protein none 31.10 2.46 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=31.10; coverage=2.46 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(1962397..1962999) matched_representative_sequence=group_4188 AKJFEH_02645;BPDKHC_02458;CDPMCH_02667;CMNCGK_02573;EDPIJB_02558;FABDMP_02468;FMBLNF_02484;GBBODN_02533;HBFAPG_02504;JHCCBL_02548;JJJGHN_02588;MECBCD_02492;NBBOMM_02480 YtxH domain-containing protein
52 group_4187 gene_presence_absence group_4187 group_4187 | HMPREF0351_RS04710 | none confidence group_4187 PTS EIIC type-2 domain-containing protein HMPREF0351_RS04710 hypothetical protein none 32.29 1.33 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.29; coverage=1.33 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 960595..961242 matched_representative_sequence=group_4187 AKJFEH_02648;BPDKHC_02455;CDPMCH_02664;CMNCGK_02570;EDPIJB_02555;FABDMP_02465;FMBLNF_02487;GBBODN_02536;HBFAPG_02507;JHCCBL_02545;JJJGHN_02591;MECBCD_02489;NBBOMM_02477 hypothetical protein
53 group_4186 gene_presence_absence acpP group_4186 | HMPREF0351_RS00470 | none confidence acpP acyl carrier protein HMPREF0351_RS00470 acpP acyl carrier protein none 32.11 4.55 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=32.11; coverage=4.55 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 89046..89288 matched_representative_sequence=group_4186 AKJFEH_02641;BPDKHC_02462;CDPMCH_02671;CMNCGK_02577;EDPIJB_02562;FABDMP_02754;FMBLNF_02759;GBBODN_02529;HBFAPG_02500;JHCCBL_02552;JJJGHN_02584;MECBCD_02496;NBBOMM_02810 acyl carrier protein
54 group_4185 gene_presence_absence pplA group_4185 | HMPREF0351_RS12860 | none confidence pplA extracellular electron transfer flavoproteinPplA HMPREF0351_RS12860 pplA extracellular electron transfer flavoproteinPplA none 19.87 4.19 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=19.87; coverage=4.19 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 2663012..2663947 matched_representative_sequence=group_4185 AKJFEH_02646;BPDKHC_02457;CDPMCH_02666;CMNCGK_02572;EDPIJB_02557;FABDMP_02467;FMBLNF_02485;GBBODN_02534;HBFAPG_02505;JHCCBL_02547;JJJGHN_02589;MECBCD_02491;NBBOMM_02479 extracellular electron transfer flavoproteinPplA
55 group_4184 gene_presence_absence group_4184 group_4184 | HMPREF0351_RS00110 | none confidence group_4184 D-galactonate dehydratase HMPREF0351_RS00110 FUSC family protein none 29.33 0.96 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.33; coverage=0.96 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 26419..27444 matched_representative_sequence=group_4184 AKJFEH_02649;BPDKHC_02454;CDPMCH_02663;CMNCGK_02569;EDPIJB_02554;FABDMP_02464;FMBLNF_02488;GBBODN_02537;HBFAPG_02508;JHCCBL_02544;JJJGHN_02592;MECBCD_02488;NBBOMM_02476 FUSC family protein
56 group_4183 gene_presence_absence group_4183 group_4183 | HMPREF0351_RS08095 | none confidence group_4183 Phosphotriesterase HMPREF0351_RS08095 arginine repressor none 16.49 1.77 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=16.49; coverage=1.77 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 1665941..1666420 matched_representative_sequence=group_4183 AKJFEH_02650;BPDKHC_02453;CDPMCH_02662;CMNCGK_02568;EDPIJB_02553;FABDMP_02463;FMBLNF_02489;GBBODN_02538;HBFAPG_02509;JHCCBL_02543;JJJGHN_02593;MECBCD_02487;NBBOMM_02475 arginine repressor
57 group_3332 gene_presence_absence murB group_3332 | HMPREF0351_RS03235 | none confidence murB UDP-N-acetylmuramate dehydrogenase HMPREF0351_RS03235 murB UDP-N-acetylmuramate dehydrogenase none 5.23 2.88 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=5.23; coverage=2.88 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 684086..685021 matched_representative_sequence=group_3332 AKJFEH_02870;BPDKHC_02688;CDPMCH_02891;CMNCGK_02774;EDPIJB_02768;FABDMP_01807;FMBLNF_01816;GBBODN_00297;HBFAPG_02764;JHCCBL_00629;JJJGHN_02821;MECBCD_02756;NBBOMM_01855 UDP-N-acetylmuramate dehydrogenase
58 group_2801 gene_presence_absence group_2801 group_2801 | HMPREF0351_RS00075 | none confidence group_2801 Transposase HMPREF0351_RS00075 ABC-F family ATP-binding cassettedomain-containing protein none 20.24 1.81 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=20.24; coverage=1.81 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(18174..19796) matched_representative_sequence=group_2801 AKJFEH_01972;BPDKHC_01633;CDPMCH_01730;CMNCGK_01708;EDPIJB_01851;FABDMP_01417;FMBLNF_01435;GBBODN_02129;HBFAPG_01811;JHCCBL_02014;JJJGHN_01672;MECBCD_01614;NBBOMM_01640 ABC-F family ATP-binding cassettedomain-containing protein
59 group_1205 gene_presence_absence ssb group_1205 | HMPREF0351_RS00040 | none confidence ssb PTS system trehalose-specific EIIBC component HMPREF0351_RS00040 ssb single-stranded DNA-binding protein none 32.14 0.78 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=32.14; coverage=0.78 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 9334..9846 matched_representative_sequence=group_1205 AKJFEH_02869;BPDKHC_02687;CDPMCH_02890;CMNCGK_02773;EDPIJB_02769;FABDMP_01808;FMBLNF_01817;GBBODN_00296;HBFAPG_02765;JHCCBL_00628;JJJGHN_02822;MECBCD_02755;NBBOMM_01856 single-stranded DNA-binding protein
60 group_3755 gene_presence_absence group_3755 group_3755 | HMPREF0351_RS10785 | none confidence group_3755 Transposase;DNA polymerase III beta subunit HMPREF0351_RS10785 ABC transporter ATP-binding protein none 13.22 0.51 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=13.22; coverage=0.51 15 50 0.3000 0 50 0.0000 cases (vancomycin resistant) 3.87 44.0986 2.554-761.4 2.55406 761.408 3.49e-06 13.9198 Panaroo/Bakta+GenBank nucleotide_similarity complement(2210900..2211970) matched_representative_sequence=group_3755 BCEGCL_02842;FIOBDN_02757;FNLDHP_02959;GCGADK_02775;JAJEAH_01990;JGBMCF_02009;JJIELG_02218;LJIIAA_02679;MMOFNP_01989;NBNIPB_02297;NCCLJD_01977;ODBCAF_02701;ODHHNB_02695;OIGEFE_02004;PDKMDO_02744 ABC transporter ATP-binding protein
61 group_1150 gene_presence_absence group_1150 group_1150 | HMPREF0351_RS07080 | none confidence group_1150 hypothetical protein HMPREF0351_RS07080 hypothetical protein none 15.24 4.68 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=15.24; coverage=4.68 5 50 0.1000 28 50 0.5600 controls (vancomycin sensitive) -2.92 0.0954309 0.03362-0.2709 0.03362 0.270882 3.5e-08 13.8453 Panaroo/Bakta+GenBank nucleotide_similarity complement(<1457531..1457818) matched_representative_sequence=group_1150 27_refound_386_pseudo;AKJFEH_00289;BFAOAP_02202;BIDKHD_00548;BNFCCO_00963;BPDKHC_00346;CDPMCH_00637;CMNCGK_00496;DAGPJG_02246;DAGPJG_02914;DHOPGE_00596;DNAMMH_00793;DNHFDD_02310;EDPIJB_00545;EJLAKB_01772;FBIILI_00291;FOJCEI_00632;GJOFNM_02347;GJOFNM_02972;HBFAPG_00399;HKAALB_01061;IAFNHG_01904;IGDGNK_01449;IIIHAF_01362;IPIGJP_01929;JABKKB_00647;JFOMPD_01260;JJJGHN_00446;KAOGPO_00171;MECBCD_02003 hypothetical protein
62 group_3557 gene_presence_absence group_3557 group_3557 | HMPREF0351_RS00110 | none confidence group_3557 O-antigen ligase-related domain-containing protein;hypothetical protein HMPREF0351_RS00110 FUSC family protein none 33.25 0.85 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.25; coverage=0.85 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.27 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.3e-06 13.8226 Panaroo/Bakta+GenBank nucleotide_similarity 26419..27444 matched_representative_sequence=group_3557 AKJFEH_02640;BJIIEG_01966;BPDKHC_02494;CDPMCH_02075;CMNCGK_02009;EDPIJB_02001;FBIILI_01998;FOJCEI_02177;GBBODN_01840;HBFAPG_01955;JHCCBL_02541;JJJGHN_02037;MECBCD_01929 FUSC family protein
63 group_2519 gene_presence_absence group_2519 group_2519 | HMPREF0351_RS01750 | none confidence group_2519 Glycosyl transferase family 2 HMPREF0351_RS01750 hypothetical protein none 25.02 1.55 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=25.02; coverage=1.55 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.27 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.3e-06 13.8226 Panaroo/Bakta+GenBank nucleotide_similarity 353906..354130 matched_representative_sequence=group_2519 AKJFEH_02603;BJIIEG_01970;BPDKHC_02575;CDPMCH_02071;CMNCGK_02013;EDPIJB_02005;FBIILI_02002;FOJCEI_02181;GBBODN_02615;HBFAPG_01959;JHCCBL_02517;JJJGHN_02033;MECBCD_01925 hypothetical protein
64 group_2499 gene_presence_absence rimI group_2499 | HMPREF0351_RS08145 | none confidence rimI Glycosyl transferase HMPREF0351_RS08145 rimI ribosomal protein S18-alanineN-acetyltransferase none 21.11 1.64 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=21.11; coverage=1.64 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.27 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.3e-06 13.8226 Panaroo/Bakta+GenBank nucleotide_similarity complement(1677148..1677612) matched_representative_sequence=group_2499 26_refound_366_pseudo;AKJFEH_02602;BJIIEG_01969;CDPMCH_02072;CMNCGK_02012;EDPIJB_02004;FBIILI_02001;FOJCEI_02180;GBBODN_02616;HBFAPG_01958;JHCCBL_02516;JJJGHN_02034;MECBCD_01926 ribosomal protein S18-alanineN-acetyltransferase
65 vanYA gene_presence_absence vanY-A vanYA | HMPREF0351_RS00070 | none confidence vanY-A D-Ala-D-Ala carboxypeptidase VanY-A HMPREF0351_RS00070 DegV family protein none 37.05 0.99 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=37.05; coverage=0.99 28 50 0.5600 4 50 0.0800 cases (vancomycin resistant) 2.73 13.0889 4.295-39.89 4.29472 39.8906 9.15e-08 13.7488 Panaroo/Bakta+GenBank nucleotide_similarity 17182..18045 matched_representative_sequence=vanYA BBAPLL_02878;DAGPJG_02754;DPGNPC_03024;EAHGHC_02514;EBMNDJ_02626;EMDJIL_02475;FAEPFC_03007;FIOBDN_02838;FNLDHP_02910;GBBODN_02594;GCGADK_02814;GJOFNM_02703;HOGLGD_02596;JAJEAH_01983;JGBMCF_02002;JHCCBL_02629;JJIELG_02225;KFIHCG_02583;LJIIAA_03088;LKPDJB_02399;LNBAGD_02788;MHHDHD_02727;MMOFNP_01982;NBNIPB_02290;NCCLJD_01984;NJLMCP_02694;ODBCAF_02630;ODHHNB_02744;OIGEFE_01997;OOIKMG_02605 DegV family protein
66 group_2963 gene_presence_absence truA group_2963 | HMPREF0351_RS01490 | none confidence truA tRNA pseudouridine synthase A HMPREF0351_RS01490 truA tRNA pseudouridine(38-40) synthase TruA none 95.49 9.41 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=95.49; coverage=9.41 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity 300227..300967 matched_representative_sequence=group_2963 AAEDFP_02198;AKJFEH_02321;BFAOAP_02793;BIDKHD_01648;BJIIEG_02383;BJKGBB_02289;BNFCCO_01195;BODMBB_02481;BOPMCK_01796;BPDKHC_02237;CDPMCH_02393;CHGPCO_02202;CMDIKE_01961;CMNCGK_02329;COMFNP_00656;DAGLGK_00181;DAGPJG_02688;DEFBHI_01530;DFLILH_02109;DHOPGE_02715;DJAJGG_02478;DNAMMH_00619;DNHFDD_02689;DPGNPC_01191;EBMNDJ_01079;EDPIJB_02238;EJLAKB_01112;FABDMP_01117;FAEPFC_01244;FBIILI_01241 tRNA pseudouridine(38-40) synthase TruA
67 group_1692 gene_presence_absence group_1692 group_1692 | HMPREF0351_RS01485 | none confidence group_1692 DUF998 domain-containing protein HMPREF0351_RS01485 DUF998 domain-containing protein none 96.38 13.05 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=96.38; coverage=13.05 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity 299401..300036 matched_representative_sequence=group_1692 AAEDFP_02199;AKJFEH_02322;BFAOAP_02794;BIDKHD_01647;BJIIEG_02382;BJKGBB_02288;BNFCCO_01194;BODMBB_02482;BOPMCK_01797;BPDKHC_02236;CDPMCH_02392;CHGPCO_02201;CMDIKE_01960;CMNCGK_02328;COMFNP_00655;DAGLGK_00182;DAGPJG_02687;DEFBHI_01529;DFLILH_02110;DHOPGE_02714;DJAJGG_02479;DNAMMH_00618;DNHFDD_02690;DPGNPC_01190;EBMNDJ_01080;EDPIJB_02239;EJLAKB_01111;FABDMP_01111;FAEPFC_01243;FBIILI_01240 DUF998 domain-containing protein
68 sstT gene_presence_absence sstT sstT | HMPREF0351_RS01480 | high confidence ;sstT hypothetical protein;Serine/threonine transporter SstT;Na(+)/serine-threonine symporter HMPREF0351_RS01480 sstT serine/threonine transporter SstT high 100.0 100.0 High-confidence GenBank-supported annotation. identity=100.0; coverage=100.0 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank qualifier_exact 298034..299254 AAEDFP_02200;AKJFEH_02323;BFAOAP_02795;BIDKHD_01646;BJIIEG_02381;BJKGBB_02287;BNFCCO_01193;BODMBB_02483;BOPMCK_01798;BPDKHC_02235;CDPMCH_02391;CHGPCO_02200;CMDIKE_01959;CMNCGK_02327;COMFNP_00654;DAGLGK_00183;DAGPJG_02686;DEFBHI_01528;DFLILH_02111;DHOPGE_02713;DJAJGG_02480;DNAMMH_00617;DNHFDD_02691;DPGNPC_01189;EBMNDJ_01081;EDPIJB_02240;EJLAKB_01110;FABDMP_01110;FABDMP_02499;FAEPFC_01242 serine/threonine transporter SstT
69 group_1374 gene_presence_absence group_1374 group_1374 | HMPREF0351_RS08610 | none confidence group_1374 NADP-dependent oxidoreductase domain-containing protein;hypothetical protein;Putative ion-channel protein HMPREF0351_RS08610 PTS system mannose/fructose/sorbose familytransporter subunit IID none 33.22 1.62 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.22; coverage=1.62 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity complement(1760028..1760819) matched_representative_sequence=group_1374 AAEDFP_00850;AKJFEH_02317;AKJFEH_02318;BFAOAP_02942;BIDKHD_01653;BJIIEG_00673;BJKGBB_02292;BJKGBB_02293;BNFCCO_01200;BODMBB_02477;BODMBB_02478;BOPMCK_01791;BOPMCK_01792;BPDKHC_02240;BPDKHC_02241;CDPMCH_02396;CDPMCH_02397;CHGPCO_01757;CMDIKE_01966;CMNCGK_02332;CMNCGK_02333;COMFNP_00661;DAGLGK_00176;DAGPJG_02778;DEFBHI_02312;DFLILH_02105;DFLILH_02106;DHOPGE_02901;DJAJGG_02474;DJAJGG_02475 PTS system mannose/fructose/sorbose familytransporter subunit IID
70 group_1327 gene_presence_absence group_1327 group_1327 | HMPREF0351_RS01535 | none confidence group_1327 hypothetical protein;Permease IIC component HMPREF0351_RS01535 PTS sugar transporter subunit IIC none 91.83 17.37 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=91.83; coverage=17.37 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity 310765..312081 matched_representative_sequence=group_1327 AAEDFP_00852;AKJFEH_02315;BFAOAP_02897;BIDKHD_01655;BJIIEG_00675;BJKGBB_02295;BNFCCO_01202;BODMBB_02475;BOPMCK_01789;BPDKHC_02243;CDPMCH_02399;CHGPCO_01755;CMDIKE_01968;CMNCGK_02335;COMFNP_00663;DAGLGK_00174;DAGPJG_00162;DEFBHI_02314;DFLILH_02103;DHOPGE_00294;DJAJGG_02472;DNAMMH_00626;DNHFDD_00349;DPGNPC_01198;EBMNDJ_01072;EDPIJB_02232;EJLAKB_01119;FABDMP_01121;FAEPFC_01251;FBIILI_01248 PTS sugar transporter subunit IIC
71 group_669 gene_presence_absence HMPREF0351_RS01460 (group_669) group_669 | HMPREF0351_RS01460 | high confidence group_669 DUF4767 domain-containing protein;hypothetical protein HMPREF0351_RS01460 DUF4767 domain-containing protein high 100.00 94.47 High-confidence locus-level GenBank rescue. identity=100.00; coverage=94.47 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 292498..293214 matched_representative_sequence=group_669 AAEDFP_02203;AKJFEH_02324;BFAOAP_03100;BIDKHD_01643;BJIIEG_02380;BJKGBB_02286;BNFCCO_01190;BODMBB_02484;BOPMCK_01799;BPDKHC_02234;CDPMCH_02390;CHGPCO_02197;CMDIKE_01956;CMNCGK_02326;COMFNP_00651;DAGLGK_00186;DAGPJG_02938;DEFBHI_01525;DFLILH_02112;DHOPGE_03080;DJAJGG_02481;DNAMMH_00614;DNHFDD_03040;DPGNPC_01186;EBMNDJ_01084;EDPIJB_02241;EJLAKB_01107;FABDMP_02498;FAEPFC_01239;FBIILI_01235 DUF4767 domain-containing protein
72 msrA gene_presence_absence msrA msrA | HMPREF0351_RS12740 | high confidence msrA; Peptide methionine sulfoxide reductase MsrA;hypothetical protein HMPREF0351_RS12740 msrA peptide-methionine (S)-S-oxide reductase MsrA high 100.0 100.0 High-confidence GenBank-supported annotation. identity=100.0; coverage=100.0 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank qualifier_exact complement(2629091..2629618) AAEDFP_00849;AKJFEH_02320;BFAOAP_02943;BIDKHD_01652;BJIIEG_00672;BJKGBB_02290;BNFCCO_01199;BODMBB_02480;BOPMCK_01794;BPDKHC_02238;CDPMCH_02394;CHGPCO_01758;CMDIKE_01965;CMNCGK_02330;COMFNP_00660;DAGLGK_00177;DAGPJG_02779;DEFBHI_02311;DFLILH_02108;DHOPGE_02902;DJAJGG_02477;DNAMMH_00623;DNHFDD_02867;DPGNPC_01195;EBMNDJ_01075;EDPIJB_02237;EJLAKB_01116;FABDMP_01118;FAEPFC_01248;FBIILI_01245 peptide-methionine (S)-S-oxide reductase MsrA
73 group_255 gene_presence_absence HMPREF0351_RS03150 (group_255) group_255 | HMPREF0351_RS03150 | high confidence group_255 HTH gntR-type domain-containing protein HMPREF0351_RS03150 DUF979 domain-containing protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 669691..670635 matched_representative_sequence=group_2555 AAEDFP_00851;AKJFEH_02316;BFAOAP_02898;BIDKHD_01654;BJIIEG_00674;BJKGBB_02294;BNFCCO_01201;BODMBB_02476;BOPMCK_01790;BPDKHC_02242;CDPMCH_02398;CHGPCO_01756;CMDIKE_01967;CMNCGK_02334;COMFNP_00662;DAGLGK_00175;DAGPJG_00161;DEFBHI_02313;DFLILH_02104;DHOPGE_00295;DJAJGG_02473;DNAMMH_00625;DNHFDD_00348;DPGNPC_01197;EBMNDJ_01073;EDPIJB_02233;EJLAKB_01118;FABDMP_01120;FAEPFC_01250;FBIILI_01247 DUF979 domain-containing protein
74 arsD gene_presence_absence ;arsD arsD | HMPREF0351_RS00095 | none confidence ;arsD hypothetical protein;Arsenical resistance operon transcriptional repressor ArsD HMPREF0351_RS00095 hypothetical protein none 43.58 2.65 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=43.58; coverage=2.65 6 50 0.1200 26 50 0.5200 controls (vancomycin sensitive) -3.49 0.135043 0.0502-0.3633 0.0502041 0.363252 5.94e-08 13.1147 Panaroo/Bakta+GenBank nucleotide_similarity complement(23568..23765) matched_representative_sequence=arsD AAEDFP_02759;BFAOAP_02996;BIDKHD_02914;BNFCCO_02951;COMFNP_02877;DAGPJG_02804;DHOPGE_02937;DNAMMH_02887;DNHFDD_02908;EJLAKB_02923;FABDMP_01954;FBIILI_02778;FMBLNF_01920;GEMMFG_01798;GJOFNM_02833;HKAALB_02735;IGDGNK_02933;JABKKB_02875;JAOBDG_02726;JFOMPD_02912;KAOGPO_02942;LKPDJB_01715;MBMNML_02938;MFDKLE_02820;NBBOMM_01554;NBICIC_02740;NHJIOO_02757;NPDFDF_02944;NPNGCM_02851;OFKADD_02856 hypothetical protein
75 group_4023 gene_presence_absence group_4023 group_4023 | HMPREF0351_RS02115 | none confidence group_4023 hypothetical protein;DUF5626 domain-containing protein HMPREF0351_RS02115 PTS transporter subunit EIIC none 13.38 2.78 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=13.38; coverage=2.78 6 50 0.1200 26 50 0.5200 controls (vancomycin sensitive) -3.49 0.135043 0.0502-0.3633 0.0502041 0.363252 5.94e-08 13.1147 Panaroo/Bakta+GenBank nucleotide_similarity complement(440661..442034) matched_representative_sequence=group_4023 AAEDFP_02758;BFAOAP_02997;BIDKHD_02913;BNFCCO_02950;COMFNP_02876;DAGPJG_02805;DHOPGE_02938;DNAMMH_02886;DNHFDD_02907;EJLAKB_02922;FABDMP_01953;FBIILI_02779;FMBLNF_01921;GEMMFG_01797;GJOFNM_02832;HKAALB_02736;IGDGNK_02934;JABKKB_02874;JAOBDG_02725;JFOMPD_02911;KAOGPO_02943;LKPDJB_01714;MBMNML_02939;MFDKLE_02821;NBBOMM_01553;NBICIC_02739;NHJIOO_02758;NPDFDF_02943;NPNGCM_02850;OFKADD_02855 PTS transporter subunit EIIC
76 group_3339 gene_presence_absence group_3339 group_3339 | HMPREF0351_RS15400 | none confidence group_3339 ORC1/DEAH AAA+ ATPase domain-containing protein HMPREF0351_RS15400 hypothetical protein none 28.21 2.58 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=28.21; coverage=2.58 6 50 0.1200 26 50 0.5200 controls (vancomycin sensitive) -3.49 0.135043 0.0502-0.3633 0.0502041 0.363252 5.94e-08 13.1147 Panaroo/Bakta+GenBank nucleotide_similarity 376524..376976 matched_representative_sequence=group_3339 AAEDFP_02757;BFAOAP_02998;BIDKHD_02912;BNFCCO_02949;COMFNP_02875;DAGPJG_02806;DHOPGE_02939;DNAMMH_02885;DNHFDD_02906;EJLAKB_02921;FABDMP_01952;FBIILI_02780;FMBLNF_01922;GEMMFG_01796;GJOFNM_02831;HKAALB_02737;IGDGNK_02935;JABKKB_02873;JAOBDG_02724;JFOMPD_02910;KAOGPO_02944;LKPDJB_01713;MBMNML_02940;MFDKLE_02822;NBBOMM_01552;NBICIC_02738;NHJIOO_02759;NPDFDF_02942;NPNGCM_02849;OFKADD_02854 hypothetical protein
77 group_4054 gene_presence_absence group_4054 group_4054 | HMPREF0351_RS04055 | none confidence group_4054 hypothetical protein;Transporter HMPREF0351_RS04055 HNH endonuclease none 20.41 0.98 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=20.41; coverage=0.98 0 50 0.0000 12 50 0.2400 controls (vancomycin sensitive) -4.06 0.030495 0.00175-0.5313 0.00175046 0.53126 8.48e-06 13.1069 Panaroo/Bakta+GenBank nucleotide_similarity 836051..836395 matched_representative_sequence=group_4054 AKJFEH_02601;BJIIEG_01968;CDPMCH_02073;CMNCGK_02011;EDPIJB_02003;FBIILI_02000;FOJCEI_02179;GBBODN_01838;HBFAPG_01957;JHCCBL_02515;JJJGHN_02035;MECBCD_01927 HNH endonuclease
78 group_3407 gene_presence_absence group_3407 group_3407 | HMPREF0351_RS07295 | none confidence group_3407 Glycosyltransferase putative HMPREF0351_RS07295 alpha/beta hydrolase none 33.84 1.31 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.84; coverage=1.31 0 50 0.0000 12 50 0.2400 controls (vancomycin sensitive) -4.06 0.030495 0.00175-0.5313 0.00175046 0.53126 8.48e-06 13.1069 Panaroo/Bakta+GenBank nucleotide_similarity complement(1489360..1490361) matched_representative_sequence=group_3407 58_refound_831_pseudo;AKJFEH_02600;BJIIEG_01967;CDPMCH_02074;CMNCGK_02010;EDPIJB_02002;FBIILI_01999;FOJCEI_02178;GBBODN_01839;HBFAPG_01956;JJJGHN_02036;MECBCD_01928 alpha/beta hydrolase
79 group_3095 gene_presence_absence recX group_3095 | HMPREF0351_RS04525 | none confidence recX Stage 0 sporulation A-like protein HMPREF0351_RS04525 recX recombination regulator RecX none 29.31 2.69 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=29.31; coverage=2.69 22 50 0.4400 2 50 0.0400 cases (vancomycin resistant) 2.92 15.3158 3.83-61.25 3.82955 61.2536 7.58e-07 13.0573 Panaroo/Bakta+GenBank nucleotide_similarity 926299..927096 matched_representative_sequence=group_3095 BBAPLL_02224;BCEGCL_01806;CMDIKE_02307;DJAJGG_02146;DPGNPC_01955;EAHGHC_02201;EBMNDJ_02523;EMDJIL_02497;FAEPFC_02048;FIOBDN_02076;FNLDHP_01983;FOJCEI_02359;HLAPEO_01809;HMGPKC_01331;KFIHCG_02158;KFKELN_02237;LJIIAA_02417;LNBAGD_02091;LPODHN_02003;NJLMCP_02521;NPNGCM_01830;ODHHNB_02027;OOIKMG_02159;OPKPKN_02580 recombination regulator RecX
80 group_2101 gene_presence_absence group_2101 group_2101 | HMPREF0351_RS00065 | none confidence group_2101 histidine kinase HMPREF0351_RS00065 adenylosuccinate synthase none 34.94 1.15 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=34.94; coverage=1.15 22 50 0.4400 2 50 0.0400 cases (vancomycin resistant) 2.92 15.3158 3.83-61.25 3.82955 61.2536 7.58e-07 13.0573 Panaroo/Bakta+GenBank nucleotide_similarity 15103..16395 matched_representative_sequence=group_2101 48_refound_664;BBAPLL_02223;BCEGCL_01807;CMDIKE_02306;DJAJGG_02145;DPGNPC_01954;EAHGHC_02202;EBMNDJ_02524;EMDJIL_02498;FAEPFC_02049;FIOBDN_02077;FNLDHP_01984;FOJCEI_02358;HLAPEO_01810;HMGPKC_01330;KFIHCG_02157;KFKELN_02238;LJIIAA_02416;LPODHN_02004;NJLMCP_02522;NPNGCM_01831;ODHHNB_02028;OOIKMG_02158;OPKPKN_02581 adenylosuccinate synthase
81 group_3889 gene_presence_absence group_3889 group_3889 | HMPREF0351_RS07075 | none confidence group_3889 hypothetical protein;YokE-like PH domain-containing protein HMPREF0351_RS07075 IS30 family transposase none 32.27 3.31 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.27; coverage=3.31 6 50 0.1200 28 50 0.5600 controls (vancomycin sensitive) -2.74 0.115316 0.04279-0.3108 0.0427889 0.310778 1.39e-07 12.9733 Panaroo/Bakta+GenBank nucleotide_similarity 1456563..1457522 matched_representative_sequence=group_3889 16_refound_239_pseudo;AKJFEH_00290;BFAOAP_02203;BIDKHD_00549;BNFCCO_00964;BPDKHC_00347;CDPMCH_00636;CMNCGK_00495;DAGPJG_02915;DHOPGE_00595;DNAMMH_00792;EDPIJB_00544;EJLAKB_01771;FBIILI_00292;FOJCEI_00633;GJOFNM_02973;HBFAPG_00398;HKAALB_01062;IAFNHG_01903;IGDGNK_01448;IIIHAF_01363;IPIGJP_01930;JABKKB_00648;JAOBDG_00767;JFOMPD_01261;JJJGHN_00447;KAOGPO_00170;MBMNML_00801;MECBCD_02004;NBICIC_01116 IS30 family transposase
82 group_3313 gene_presence_absence group_3313 group_3313 | HMPREF0351_RS02240 | none confidence group_3313 Peptidase HMPREF0351_RS02240 PLP-dependent cysteine synthase family protein none 24.95 2.73 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=24.95; coverage=2.73 6 50 0.1200 28 50 0.5600 controls (vancomycin sensitive) -2.74 0.115316 0.04279-0.3108 0.0427889 0.310778 1.39e-07 12.9733 Panaroo/Bakta+GenBank nucleotide_similarity complement(470653..471570) matched_representative_sequence=group_3313 AKJFEH_00291;BFAOAP_02204;BIDKHD_00550;BNFCCO_00965;BPDKHC_00348;CDPMCH_00635;CMNCGK_00494;DAGPJG_02916;DHOPGE_00594;DNAMMH_00791;DNHFDD_01848;EDPIJB_00543;EJLAKB_01770;FBIILI_00293;FOJCEI_00634;GJOFNM_02974;HBFAPG_00397;HKAALB_01063;IAFNHG_01902;IGDGNK_01447;IIIHAF_01364;IPIGJP_01931;JABKKB_00649;JAOBDG_00766;JFOMPD_01262;JJJGHN_00448;KAOGPO_00169;MBMNML_00802;MECBCD_00721;NBICIC_01117 PLP-dependent cysteine synthase family protein
83 group_1747 gene_presence_absence group_1747 group_1747 | HMPREF0351_RS08590 | none confidence group_1747 HAD hydrolase family IA;hypothetical protein HMPREF0351_RS08590 VOC family protein none 40.85 2.01 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=40.85; coverage=2.01 8 50 0.1600 30 50 0.6000 controls (vancomycin sensitive) -2.77 0.134426 0.0533-0.339 0.0533023 0.339018 1.23e-07 12.8052 Panaroo/Bakta+GenBank nucleotide_similarity complement(1757298..1757672) matched_representative_sequence=group_1747 AKJFEH_00282;BFAOAP_02195;BIDKHD_00541;BNFCCO_00956;BPDKHC_00339;CDPMCH_00644;CMNCGK_00503;DAGPJG_02239;DEFBHI_01355;DHOPGE_02379;DNAMMH_00800;DNHFDD_02317;EDPIJB_00552;EJLAKB_01779;FBIILI_00284;FOJCEI_00625;GJOFNM_02340;HBFAPG_00406;HKAALB_02258;HMJOEN_01967;IAFNHG_01911;IGDGNK_01456;IIIHAF_02354;IPIGJP_01922;JABKKB_00640;JAOBDG_02744;JFOMPD_02515;JJJGHN_00439;KAOGPO_00179;LJIIAA_00461 VOC family protein
84 group_1328 gene_presence_absence group_1328 group_1328 | HMPREF0351_RS01545 | none confidence group_1328 Lichenan-specific phosphotransferase enzyme iib component (Pts system lichenan-specific eiib component) (Eiib-lic) HMPREF0351_RS01545 PTS sugar transporter subunit IIB none 95.64 23.36 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=95.64; coverage=23.36 37 50 0.7400 50 50 1.0000 controls (vancomycin sensitive) -3.6 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.51e-05 12.7846 Panaroo/Bakta+GenBank nucleotide_similarity 313977..314297 matched_representative_sequence=group_1328 AAEDFP_00854;AKJFEH_02618;BFAOAP_02895;BIDKHD_01842;BJIIEG_00677;BJKGBB_02470;BNFCCO_01204;BODMBB_02625;BOPMCK_02526;BPDKHC_02439;CDPMCH_02660;CHGPCO_01753;CMDIKE_01970;CMNCGK_02554;COMFNP_00665;DAGLGK_00172;DAGPJG_00164;DEFBHI_02316;DFLILH_02101;DHOPGE_00292;DJAJGG_02593;DNAMMH_00628;DNHFDD_00351;DPGNPC_01200;EBMNDJ_01070;EDPIJB_02539;EJLAKB_01121;FABDMP_01123;FAEPFC_01253;FBIILI_01250 PTS sugar transporter subunit IIB
85 group_834 gene_presence_absence HMPREF0351_RS01550-like (group_834) group_834 | HMPREF0351_RS01550 | medium confidence group_834 Lichenan-specific phosphotransferase enzyme IIA component HMPREF0351_RS01550 PTS lactose/cellobiose transporter subunit IIA medium 99.37 65.41 Medium-confidence locus-level GenBank rescue. identity=99.37; coverage=65.41 37 50 0.7400 50 50 1.0000 controls (vancomycin sensitive) -3.6 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.51e-05 12.7846 Panaroo/Bakta+GenBank nucleotide_similarity 314323..314640 matched_representative_sequence=group_834 AAEDFP_00855;AKJFEH_02619;BFAOAP_02894;BIDKHD_01841;BJIIEG_00678;BJKGBB_02469;BNFCCO_01205;BODMBB_02626;BOPMCK_02527;BPDKHC_02440;CDPMCH_02659;CHGPCO_01752;CMDIKE_01971;CMNCGK_02555;COMFNP_00666;DAGLGK_00171;DAGPJG_00165;DEFBHI_02317;DFLILH_02100;DHOPGE_00291;DJAJGG_02592;DNAMMH_00629;DNHFDD_00352;DPGNPC_01201;EBMNDJ_01069;EDPIJB_02540;EJLAKB_01122;FABDMP_01124;FAEPFC_01254;FBIILI_01251 PTS lactose/cellobiose transporter subunit IIA
86 gmuD gene_presence_absence ;gmuD gmuD | HMPREF0351_RS01540 | none confidence ;gmuD hypothetical protein;6-phospho-beta-glucosidase gmuD HMPREF0351_RS01540 glycoside hydrolase family 1 protein none 94.56 7.77 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=94.56; coverage=7.77 37 50 0.7400 50 50 1.0000 controls (vancomycin sensitive) -3.6 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.51e-05 12.7846 Panaroo/Bakta+GenBank nucleotide_similarity 312098..313513 matched_representative_sequence=gmuD AAEDFP_00853;AKJFEH_02312;BFAOAP_02896;BIDKHD_01656;BJIIEG_00676;BJKGBB_02298;BNFCCO_01203;BODMBB_02932;BOPMCK_01788;BOPMCK_02846;BPDKHC_02246;CDPMCH_02402;CHGPCO_01754;CMDIKE_01969;CMNCGK_02338;COMFNP_00664;DAGLGK_00173;DAGPJG_00163;DEFBHI_02315;DFLILH_02102;DHOPGE_00293;DJAJGG_02892;DNAMMH_00627;DNHFDD_00350;DPGNPC_01199;EBMNDJ_01071;EDPIJB_02229;EJLAKB_01120;FABDMP_01122;FAEPFC_01252 glycoside hydrolase family 1 protein
87 group_3276 gene_presence_absence rpsF group_3276 | HMPREF0351_RS00035 | none confidence rpsF Resolvase HMPREF0351_RS00035 rpsF 30S ribosomal protein S6 none 35.42 1.60 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=35.42; coverage=1.60 13 50 0.2600 0 50 0.0000 cases (vancomycin resistant) 3.56 36.36 2.094-631.2 2.09447 631.209 2.55e-05 12.7777 Panaroo/Bakta+GenBank nucleotide_similarity 8985..9284 matched_representative_sequence=group_3276 EAHGHC_02519;EBMNDJ_02631;EMDJIL_02470;FNLDHP_02744;GCGADK_02809;HOGLGD_02601;KFIHCG_02588;LKPDJB_02394;NJLMCP_02699;ODBCAF_02635;ODHHNB_02739;OOIKMG_02610;PDKMDO_02787 30S ribosomal protein S6
88 group_3410 gene_presence_absence rplI group_3410 | HMPREF0351_RS00055 | none confidence rplI 50S ribosomal protein L9 HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 43.55 1.94 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=43.55; coverage=1.94 0 50 0.0000 12 50 0.2400 controls (vancomycin sensitive) -3.87 0.030495 0.00175-0.5313 0.00175046 0.53126 1.81e-05 12.7776 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=group_3410 CDPMCH_01834;DHOPGE_01521;DNHFDD_01777;HKAALB_01889;JAOBDG_01166;MFDKLE_01696;NBICIC_01556;NHJIOO_01615;NPNGCM_01728;OFKADD_01705;PCBIPO_01699;PDOPEE_01755 50S ribosomal protein L9
89 group_3894 gene_presence_absence group_3894 group_3894 | HMPREF0351_RS01510 | none confidence group_3894 HTH asnC-type domain-containing protein HMPREF0351_RS01510 glycosyltransferase family protein none 30.50 7.23 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=30.50; coverage=7.23 5 50 0.1000 24 50 0.4800 controls (vancomycin sensitive) -3.3 0.130747 0.04614-0.3705 0.046145 0.370457 2.07e-07 12.6192 Panaroo/Bakta+GenBank nucleotide_similarity 304524..305930 matched_representative_sequence=group_3894 AAEDFP_00580;BFAOAP_00109;BIDKHD_00682;BNFCCO_01312;DAGPJG_01848;DHOPGE_00212;DNAMMH_03005;DNHFDD_00109;EJLAKB_01153;FABDMP_01955;FBIILI_02824;FMBLNF_01919;GEMMFG_01799;GJOFNM_00753;HKAALB_02137;IGDGNK_00883;JABKKB_00779;JAOBDG_00876;JFOMPD_00680;KAOGPO_02017;MBMNML_00746;MFDKLE_00223;NBBOMM_01555;NBICIC_00639;NPDFDF_01329;NPNGCM_00100;OFKADD_00621;PCBIPO_00223;PDOPEE_00571 glycosyltransferase family protein
90 group_4457 gene_presence_absence group_4457 group_4457 | HMPREF0351_RS00115 | none confidence group_4457 Transposase IS116/IS110/IS902 family HMPREF0351_RS00115 acyltransferase domain-containing protein none 38.25 2.25 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=38.25; coverage=2.25 0 50 0.0000 11 50 0.2200 controls (vancomycin sensitive) -3.98 0.0340077 0.001944-0.595 0.00194385 0.594968 2.89e-05 12.4171 Panaroo/Bakta+GenBank nucleotide_similarity 27767..28645 matched_representative_sequence=group_4457 BFAOAP_03110;DHOPGE_03086;DNHFDD_03045;JAOBDG_02873;KAOGPO_03084;MFDKLE_02965;NBICIC_02896;NHJIOO_02889;OFKADD_03010;PCBIPO_02991;PDOPEE_03163 acyltransferase domain-containing protein
91 group_619 gene_presence_absence group_619 group_619 | HMPREF0351_RS05350 | none confidence group_619 Group II intron reverse transcriptase/maturase HMPREF0351_RS05350 RecQ family ATP-dependent DNA helicase none 21.52 0.89 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=21.52; coverage=0.89 12 50 0.2400 0 50 0.0000 cases (vancomycin resistant) 3.5 32.7922 1.882-571.3 1.88232 571.28 5.89e-05 12.2652 Panaroo/Bakta+GenBank nucleotide_similarity 1092405..1093808 matched_representative_sequence=group_619 BBAPLL_01893;BCEGCL_01461;EAHGHC_01854;EMDJIL_01730;FNLDHP_01409;GCGADK_02749;HLAPEO_01943;KFKELN_01810;NBNIPB_02142;ODBCAF_02270;OPKPKN_01899;PDKMDO_02729 RecQ family ATP-dependent DNA helicase
92 group_4367 gene_presence_absence group_4367 group_4367 | HMPREF0351_RS06650 | none confidence group_4367 DUF4355 domain-containing protein;hypothetical protein HMPREF0351_RS06650 AbrB/MazE/SpoVT family DNA-bindingdomain-containing protein none 29.33 4.13 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.33; coverage=4.13 12 50 0.2400 0 50 0.0000 cases (vancomycin resistant) 3.45 32.7922 1.882-571.3 1.88232 571.28 6.67e-05 12.2112 Panaroo/Bakta+GenBank nucleotide_similarity 1361813..1362049 matched_representative_sequence=group_4367 73_refound_962_pseudo;BBAPLL_02807;CMDIKE_02841;DPGNPC_03047;EAHGHC_02819;EMDJIL_02728;FAEPFC_02933;FIOBDN_02823;FNLDHP_02929;GCGADK_02971;HLAPEO_02832;HOGLGD_02693 AbrB/MazE/SpoVT family DNA-bindingdomain-containing protein
93 vanZA gene_presence_absence vanZ-A vanZA | HMPREF0351_RS00105 | none confidence vanZ-A glycopeptide resistance protein VanZ-A HMPREF0351_RS00105 VanZ family protein none 33.13 3.91 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=33.13; coverage=3.91 25 50 0.5000 4 50 0.0800 cases (vancomycin resistant) 2.49 10.3333 3.397-31.43 3.39702 31.4328 1.61e-06 12.1624 Panaroo/Bakta+GenBank nucleotide_similarity complement(25557..26060) matched_representative_sequence=vanZA DAGPJG_02755;EAHGHC_02515;EBMNDJ_02627;EMDJIL_02474;FIOBDN_02839;FNLDHP_02911;GBBODN_02595;GCGADK_02813;GJOFNM_02702;HOGLGD_02597;JAJEAH_01982;JGBMCF_02001;JHCCBL_02628;JJIELG_02226;KFIHCG_02584;LJIIAA_03087;LKPDJB_02398;LNBAGD_02787;MHHDHD_02726;MMOFNP_01981;NBNIPB_02289;NCCLJD_01985;NJLMCP_02695;ODBCAF_02631;ODHHNB_02743;OIGEFE_01996;OOIKMG_02606;OPKPKN_02931;PDKMDO_02783 VanZ family protein
94 group_2450 gene_presence_absence croR group_2450 | HMPREF0351_RS12960 | none confidence croR Enterocin A immunity protein HMPREF0351_RS12960 croR response regulator transcription factor CroR none 20.33 4.80 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=20.33; coverage=4.80 7 50 0.1400 28 50 0.5600 controls (vancomycin sensitive) -2.57 0.136116 0.05254-0.3526 0.0525433 0.352616 5.43e-07 12.1423 Panaroo/Bakta+GenBank nucleotide_similarity 2680627..2681316 matched_representative_sequence=group_2450 AAEDFP_01749;AKJFEH_00292;BFAOAP_02205;BIDKHD_00551;BNFCCO_00966;BPDKHC_00349;CDPMCH_00634;CMNCGK_00493;DAGPJG_02128;DHOPGE_00593;DNAMMH_00790;DNHFDD_01847;EDPIJB_00542;EJLAKB_01769;FBIILI_00294;FOJCEI_00635;GJOFNM_02137;HBFAPG_00396;HKAALB_01064;IAFNHG_01901;IGDGNK_01446;IIIHAF_01365;IPIGJP_01932;JABKKB_00650;JAOBDG_00765;JFOMPD_01263;JJJGHN_00449;KAOGPO_00168;MBMNML_00803;MECBCD_00722 response regulator transcription factor CroR
95 group_4272 gene_presence_absence rpsR group_4272 | HMPREF0351_RS00045 | none confidence rpsR 30S ribosomal protein S18 HMPREF0351_RS00045 rpsR 30S ribosomal protein S18 none 48.55 2.84 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=48.55; coverage=2.84 20 50 0.4000 2 50 0.0400 cases (vancomycin resistant) 2.78 13.0393 3.251-52.3 3.25117 52.2964 4.04e-06 12.0984 Panaroo/Bakta+GenBank nucleotide_similarity 9872..10108 matched_representative_sequence=group_4272 BBAPLL_02716;BCEGCL_02701;CMDIKE_02786;DEFBHI_02833;DJAJGG_02768;DPGNPC_02873;EAHGHC_02725;EBMNDJ_02864;EMDJIL_02663;FAEPFC_02867;FNLDHP_02799;HLAPEO_02593;HMJOEN_02612;HOGLGD_02650;KFIHCG_02741;KFKELN_02765;LJIIAA_02935;LKPDJB_02355;LPODHN_02888;MHHDHD_02762;NJLMCP_02719;OPKPKN_02750 30S ribosomal protein S18
96 group_2753 gene_presence_absence group_2753 group_2753 | HMPREF0351_RS05105 | none confidence group_2753 PTS EIIA type-2 domain-containing protein HMPREF0351_RS05105 PTS sugar transporter subunit IIA none 96.73 37.04 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=96.73; coverage=37.04 3 50 0.0600 23 50 0.4600 controls (vancomycin sensitive) -2.6 0.0862262 0.02553-0.2913 0.0255273 0.291256 2.77e-06 12.0933 Panaroo/Bakta+GenBank nucleotide_similarity 1037363..1037821 matched_representative_sequence=group_2753 54_refound_794_pseudo;AAEDFP_02049;AKJFEH_02777;BIDKHD_02499;BJIIEG_01945;BJKGBB_02223;BNFCCO_02833;BOPMCK_02435;BPDKHC_02069;CDPMCH_02785;CMNCGK_02150;COMFNP_02313;DNAMMH_03100;EDPIJB_02670;EJLAKB_02422;FBIILI_02185;HBFAPG_02638;HLFPPN_02515;IIIHAF_02774;JABKKB_02593;JJJGHN_02734;LLNEMC_02657;MECBCD_02434;NPDFDF_02523;PEEHNF_02347;POKLJE_00715 PTS sugar transporter subunit IIA
97 group_2228 gene_presence_absence uxuA group_2228 | HMPREF0351_RS06980 | none confidence uxuA Mannonate dehydratase HMPREF0351_RS06980 uxuA mannonate dehydratase none 68.33 2.13 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=68.33; coverage=2.13 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity complement(1435402..1436484) matched_representative_sequence=group_2228 AAEDFP_02647;AKJFEH_00286;BFAOAP_02199;BIDKHD_00545;BNFCCO_00960;BPDKHC_00343;CDPMCH_00640;CMNCGK_00499;DAGPJG_02243;DEFBHI_01359;DHOPGE_02375;DNAMMH_00796;DNHFDD_02313;EDPIJB_00548;EJLAKB_01775;FBIILI_00288;FOJCEI_00629;GJOFNM_02344;HBFAPG_00402;HKAALB_01058;HMJOEN_01963;IAFNHG_01907;IGDGNK_01452;IIIHAF_02358;IPIGJP_01926;JABKKB_00644;JAOBDG_02539;JFOMPD_02519;JJJGHN_00443;KAOGPO_00175 mannonate dehydratase
98 group_1797 gene_presence_absence group_1797 group_1797 | HMPREF0351_RS15275 | none confidence group_1797 beta-N-acetylhexosaminidase HMPREF0351_RS15275 prealbumin-like fold domain-containing protein none 27.16 0.85 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.16; coverage=0.85 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity complement(1746232..1746747) matched_representative_sequence=group_1797 AAEDFP_02870;AKJFEH_00281;BFAOAP_02194;BIDKHD_00540;BNFCCO_00955;BPDKHC_00338;CDPMCH_00645;CMNCGK_00504;DAGPJG_02238;DEFBHI_01354;DHOPGE_02380;DNAMMH_00801;DNHFDD_02318;EDPIJB_00553;EJLAKB_01780;FBIILI_00283;FOJCEI_00624;GJOFNM_02339;HBFAPG_00407;HKAALB_02257;HMJOEN_01968;IAFNHG_01912;IGDGNK_01457;IIIHAF_02353;IPIGJP_01921;JABKKB_00639;JAOBDG_02745;JFOMPD_02514;JJJGHN_00438;KAOGPO_00180 prealbumin-like fold domain-containing protein
99 group_1632 gene_presence_absence group_1632 group_1632 | HMPREF0351_RS07100 | none confidence group_1632 Major facilitator superfamily (MFS) profile domain-containing protein;hypothetical protein HMPREF0351_RS07100 GlsB/YeaQ/YmgE family stress response membraneprotein none 16.67 1.16 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=16.67; coverage=1.16 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity complement(1461988..1462230) matched_representative_sequence=group_1632 49_refound_700_pseudo;AKJFEH_00283;BFAOAP_02196;BIDKHD_00542;BNFCCO_00957;BPDKHC_00340;CDPMCH_00643;CMNCGK_00502;DAGPJG_02240;DEFBHI_01356;DHOPGE_02378;DNAMMH_00799;DNHFDD_02316;EDPIJB_00551;EJLAKB_01778;FBIILI_00285;FOJCEI_00626;GJOFNM_02341;HBFAPG_00405;HKAALB_02259;HMJOEN_01966;IAFNHG_01910;IGDGNK_01455;IIIHAF_02355;IPIGJP_01923;JABKKB_00641;JAOBDG_02542;JFOMPD_02516;JJJGHN_00440;KAOGPO_00178 GlsB/YeaQ/YmgE family stress response membraneprotein
100 group_1361 gene_presence_absence group_1361 group_1361 | HMPREF0351_RS06990 | none confidence group_1361 HTH gntR-type domain-containing protein HMPREF0351_RS06990 GntR family transcriptional regulator none 68.01 2.83 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=68.01; coverage=2.83 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity 1438305..1438967 matched_representative_sequence=group_1361 AAEDFP_02947;AKJFEH_00288;BFAOAP_02201;BIDKHD_00547;BNFCCO_00962;BPDKHC_00345;CDPMCH_00638;CMNCGK_00497;DAGPJG_02245;DEFBHI_01361;DHOPGE_02373;DNAMMH_00794;DNHFDD_02311;EDPIJB_00546;EJLAKB_01773;FBIILI_00290;FOJCEI_00631;GJOFNM_02346;HBFAPG_00400;HKAALB_01060;HMJOEN_01961;IAFNHG_01905;IGDGNK_01450;IIIHAF_02360;IPIGJP_01928;JABKKB_00646;JAOBDG_02537;JFOMPD_01259;JJJGHN_00445;KAOGPO_00173 GntR family transcriptional regulator

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08 All significant gene presence/absence hits

Brief interpretation: This section lists all significant gene presence/absence hits at the selected threshold; use it for broader review beyond the top candidates.
rank feature id feature type display name display label gene name product reference locus tag reference gene reference product annotation confidence reference identity reference coverage interpretation note annotation evidence case (vancomycin resistant) present case (vancomycin resistant) total case (vancomycin resistant) frequency control (vancomycin sensitive) present control (vancomycin sensitive) total control (vancomycin sensitive) frequency enriched in beta odds ratio odds ratio ci95 odds ratio ci95 lower odds ratio ci95 upper pyseer pvalue q value priority score annotation source reference match type reference location annotation note cluster member ids notes display product
1 group_574 gene_presence_absence group_574 group_574 | HMPREF0351_RS07175 | none confidence group_574 Resolvase/invertase-type recombinase catalytic domain-containing protein HMPREF0351_RS07175 glycosyltransferase family 8 protein none 27.75 2.60 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.75; coverage=2.60 23 50 0.4600 0 50 0.0000 cases (vancomycin resistant) 4.55 86.3091 5.045-1476 5.04547 1476.42 1.25e-09 18.3345 Panaroo/Bakta+GenBank nucleotide_similarity complement(1472014..1472871) matched_representative_sequence=group_574 BCEGCL_02843;DJAJGG_02626;EAHGHC_02953;EBMNDJ_03056;FIOBDN_02756;FNLDHP_02960;GCGADK_02774;JAJEAH_01989;JGBMCF_02008;JJIELG_02219;KFIHCG_02687;LJIIAA_02678;LNBAGD_02918;MMOFNP_01988;NBNIPB_02296;NCCLJD_01978;NJLMCP_02780;ODBCAF_02702;ODHHNB_02694;OIGEFE_02003;OOIKMG_02684;OPKPKN_03009;PDKMDO_02745 glycosyltransferase family 8 protein
2 vanRA gene_presence_absence vanR-A vanRA | HMPREF0351_RS08390 | none confidence vanR-A vancomycin resistance response regulator transcription factor VanR-A HMPREF0351_RS08390 response regulator transcription factor none 36.23 2.44 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=36.23; coverage=2.44 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity complement(1724100..1724816) matched_representative_sequence=vanRA BBAPLL_02751;BCEGCL_02749;BODMBB_02748;DAGPJG_02803;DEFBHI_02705;DJAJGG_02628;DPGNPC_02801;EAHGHC_02773;EBMNDJ_02857;EMDJIL_02691;FAEPFC_02803;FIOBDN_02755;FNLDHP_02862;GBBODN_02750;GCGADK_02773;GJOFNM_02820;HLAPEO_02743;HOGLGD_02745;IAFNHG_02656;IIIHAF_02837;IPIGJP_02657;JAJEAH_01988;JGBMCF_02007;JHCCBL_02771;JJIELG_02220;KFIHCG_02685;KFKELN_02784;LJIIAA_02676;LKPDJB_02404;LNBAGD_02917 response regulator transcription factor
3 vanHA gene_presence_absence vanH-A vanHA | HMPREF0351_RS00080 | none confidence vanH-A D-lactate dehydrogenase VanH-A HMPREF0351_RS00080 HdeD family acid-resistance protein none 39.44 0.93 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=39.44; coverage=0.93 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 20045..20566 matched_representative_sequence=vanHA BBAPLL_02749;BCEGCL_02747;BODMBB_02746;DAGPJG_02801;DEFBHI_02707;DJAJGG_02630;DPGNPC_02799;EAHGHC_02771;EBMNDJ_02855;EMDJIL_02693;FAEPFC_02801;FIOBDN_02883;FNLDHP_02860;GBBODN_02752;GCGADK_02864;GJOFNM_02822;HLAPEO_02741;HOGLGD_02593;IAFNHG_02658;IIIHAF_02835;IPIGJP_02659;JAJEAH_01986;JGBMCF_02005;JHCCBL_02773;JJIELG_02222;KFIHCG_02683;KFKELN_02782;LJIIAA_02674;LKPDJB_02402;LNBAGD_02791 HdeD family acid-resistance protein
4 vanA gene_presence_absence vanA vanA | HMPREF0351_RS00070 | none confidence vanA D-alanine--(R)-lactate ligase VanA HMPREF0351_RS00070 DegV family protein none 31.65 0.97 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=31.65; coverage=0.97 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 17182..18045 matched_representative_sequence=vanA BBAPLL_02748;BCEGCL_02746;BODMBB_02745;DAGPJG_02800;DEFBHI_02708;DJAJGG_02631;DPGNPC_02798;EAHGHC_02770;EBMNDJ_02854;EMDJIL_02694;FAEPFC_02800;FIOBDN_02884;FNLDHP_02859;GBBODN_02753;GCGADK_02863;GJOFNM_02823;HLAPEO_02740;HOGLGD_02594;IAFNHG_02659;IIIHAF_02834;IPIGJP_02660;JAJEAH_01985;JGBMCF_02004;JHCCBL_02774;JJIELG_02223;KFIHCG_02682;KFKELN_02781;LJIIAA_02673;LKPDJB_02401;LNBAGD_02790 DegV family protein
5 vanSA gene_presence_absence vanS-A vanSA | HMPREF0351_RS02250 | none confidence vanS-A vancomycin resistance histidine kinase VanS-A HMPREF0351_RS02250 cysteinyl-tRNA synthetase none 18.53 1.31 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=18.53; coverage=1.31 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 472585..472833 matched_representative_sequence=vanSA BBAPLL_02750;BCEGCL_02748;BODMBB_02747;DAGPJG_02802;DEFBHI_02706;DJAJGG_02629;DPGNPC_02800;EAHGHC_02772;EBMNDJ_02856;EMDJIL_02692;FAEPFC_02802;FIOBDN_02754;FNLDHP_02861;GBBODN_02751;GCGADK_02772;GJOFNM_02821;HLAPEO_02742;HOGLGD_02746;IAFNHG_02657;IIIHAF_02836;IPIGJP_02658;JAJEAH_01987;JGBMCF_02006;JHCCBL_02772;JJIELG_02221;KFIHCG_02684;KFKELN_02783;LJIIAA_02675;LKPDJB_02403;LNBAGD_02916 cysteinyl-tRNA synthetase
6 vanXA gene_presence_absence vanX-A vanXA | HMPREF0351_RS00055 | none confidence vanX-A D-Ala-D-Ala dipeptidase VanX-A HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 38.98 1.64 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=38.98; coverage=1.64 36 50 0.7200 6 50 0.1200 cases (vancomycin resistant) 3.04 17.2334 6.193-47.96 6.19264 47.9587 2.18e-10 16.7687 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=vanXA BBAPLL_02747;BCEGCL_02745;BODMBB_02744;DAGPJG_02799;DEFBHI_02709;DJAJGG_02632;DPGNPC_02797;EAHGHC_02769;EBMNDJ_02853;EMDJIL_02695;FAEPFC_02799;FIOBDN_02885;FNLDHP_02858;GBBODN_02754;GCGADK_02862;GJOFNM_02824;HLAPEO_02739;HOGLGD_02595;IAFNHG_02660;IIIHAF_02833;IPIGJP_02661;JAJEAH_01984;JGBMCF_02003;JHCCBL_02775;JJIELG_02224;KFIHCG_02681;KFKELN_02780;LJIIAA_02672;LKPDJB_02400;LNBAGD_02789 50S ribosomal protein L9
7 group_1541 gene_presence_absence group_1541 group_1541 | HMPREF0351_RS07090 | none confidence group_1541 amino acid permease HMPREF0351_RS07090 amino acid permease none 29.08 89.71 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.08; coverage=89.71 25 50 0.5000 1 50 0.0200 cases (vancomycin resistant) 3.45 33 5.941-183.3 5.94096 183.304 4.74e-09 16.3686 Panaroo/Bakta+GenBank nucleotide_similarity complement(1458975..1460402) matched_representative_sequence=group_1541 BBAPLL_02698;BCEGCL_02733;CMDIKE_01107;DAGLGK_02662;DAGPJG_02643;DJAJGG_02666;DPGNPC_02771;EAHGHC_02700;EMDJIL_02643;FAEPFC_02782;FNLDHP_02844;GCGADK_00681;GLFBPE_02613;HLAPEO_02689;HOGLGD_02554;KFIHCG_02032;KFKELN_02740;LJIIAA_00732;LKPDJB_02460;MHHDHD_02606;NBNIPB_02513;NJLMCP_02810;ODBCAF_00558;OOIKMG_02715;OPKPKN_02730;PDKMDO_00553 amino acid permease
8 group_3535 gene_presence_absence group_3535 group_3535 | no_reference_locus | none confidence group_3535 hypothetical protein none No confident reference gene assignment; report the stable Panaroo cluster ID. no sequence identity/coverage evidence available 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta none No confident GenBank reference match found. The cluster may be accessory, divergent, absent from the reference, or not represented in Panaroo sequence outputs. BFAOAP_03116;BJKGBB_00688;DHOPGE_03087;DNHFDD_01026;GBBODN_02918;HKAALB_01385;IIIHAF_02779;JAOBDG_02874;JHCCBL_02914;KAOGPO_03087;MFDKLE_00890;NBICIC_02854;NHJIOO_01613;NPNGCM_01050;OFKADD_02962;PCBIPO_00771;PDOPEE_03164 hypothetical protein
9 group_2813 gene_presence_absence group_2813 group_2813 | HMPREF0351_RS00080 | none confidence group_2813 5-deoxy-glucuronate isomerase HMPREF0351_RS00080 HdeD family acid-resistance protein none 27.62 0.97 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.62; coverage=0.97 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 20045..20566 matched_representative_sequence=group_2813 BFAOAP_02957;BJKGBB_00692;DHOPGE_02905;DNHFDD_01030;GBBODN_02729;HKAALB_01389;IIIHAF_02775;JAOBDG_02688;JHCCBL_02753;KAOGPO_02979;MFDKLE_00886;NBICIC_02694;NHJIOO_02725;NPNGCM_01054;OFKADD_02802;PCBIPO_00777;PDOPEE_02980 HdeD family acid-resistance protein
10 group_2654 gene_presence_absence dnaN group_2654 | HMPREF0351_RS00010 | none confidence dnaN Inosose dehydratase HMPREF0351_RS00010 dnaN DNA polymerase III subunit beta none 36.60 1.12 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=36.60; coverage=1.12 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 1603..2733 matched_representative_sequence=group_2654 BFAOAP_01862;BJKGBB_01790;DHOPGE_01828;DNHFDD_02443;GBBODN_01870;HKAALB_01490;IIIHAF_01865;JAOBDG_01653;JHCCBL_01794;KAOGPO_01785;MFDKLE_02472;NBICIC_01586;NHJIOO_01728;NPNGCM_02491;OFKADD_01640;PCBIPO_01831;PDOPEE_01804 DNA polymerase III subunit beta
11 group_2392 gene_presence_absence dnaN group_2392 | HMPREF0351_RS00010 | none confidence dnaN Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase HMPREF0351_RS00010 dnaN DNA polymerase III subunit beta none 32.35 1.09 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=32.35; coverage=1.09 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 1603..2733 matched_representative_sequence=group_2392 BFAOAP_01860;BJKGBB_01792;DHOPGE_01826;DNHFDD_02441;GBBODN_01868;HKAALB_01492;IIIHAF_01863;JAOBDG_01651;JHCCBL_01796;KAOGPO_01787;MFDKLE_02470;NBICIC_01584;NHJIOO_01726;NPNGCM_02489;OFKADD_01642;PCBIPO_01833;PDOPEE_01806 DNA polymerase III subunit beta
12 group_2358 gene_presence_absence lacI group_2358 | HMPREF0351_RS00005 | none confidence lacI LacI family transcriptional regulator HMPREF0351_RS00005 dnaA chromosomal replication initiator protein DnaA none 35.20 1.18 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=35.20; coverage=1.18 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 71..1405 matched_representative_sequence=group_2358 BFAOAP_02954;BJKGBB_00689;DHOPGE_02908;DNHFDD_01027;GBBODN_02732;HKAALB_01386;IIIHAF_02778;JAOBDG_02685;JHCCBL_02756;KAOGPO_03057;MFDKLE_00889;NBICIC_02697;NHJIOO_02728;NPNGCM_01051;OFKADD_02805;PCBIPO_00774;PDOPEE_02983 chromosomal replication initiator protein DnaA
13 group_2336 gene_presence_absence recF group_2336 | HMPREF0351_RS00020 | none confidence recF Myo-inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase HMPREF0351_RS00020 recF DNA replication/repair protein RecF none 38.59 0.97 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=38.59; coverage=0.97 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 3191..4315 matched_representative_sequence=group_2336 BFAOAP_01861;BJKGBB_01791;DHOPGE_01827;DNHFDD_02442;GBBODN_01869;HKAALB_01491;IIIHAF_01864;JAOBDG_01652;JHCCBL_01795;KAOGPO_01786;MFDKLE_02471;NBICIC_01585;NHJIOO_01727;NPNGCM_02490;OFKADD_01641;PCBIPO_01832;PDOPEE_01805 DNA replication/repair protein RecF
14 group_2304 gene_presence_absence group_2304 group_2304 | HMPREF0351_RS04595 | none confidence group_2304 5-dehydro-2-deoxygluconokinase HMPREF0351_RS04595 NAD(P)-dependent oxidoreductase none 29.54 1.64 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.54; coverage=1.64 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 942492..943379 matched_representative_sequence=group_2304 BFAOAP_02955;BJKGBB_00690;DHOPGE_02907;DNHFDD_01028;GBBODN_02731;HKAALB_01387;IIIHAF_02777;JAOBDG_02686;JHCCBL_02755;KAOGPO_02977;MFDKLE_00888;NBICIC_02696;NHJIOO_02727;NPNGCM_01052;OFKADD_02804;PCBIPO_00775;PDOPEE_02982 NAD(P)-dependent oxidoreductase
15 group_2013 gene_presence_absence group_2013 group_2013 | HMPREF0351_RS00065 | none confidence group_2013 Iron-containing alcohol dehydrogenase HMPREF0351_RS00065 adenylosuccinate synthase none 33.17 0.86 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.17; coverage=0.86 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 15103..16395 matched_representative_sequence=group_2013 BFAOAP_01859;BJKGBB_01793;DHOPGE_01825;DNHFDD_02440;GBBODN_01867;HKAALB_01493;IIIHAF_01862;JAOBDG_01650;JHCCBL_01797;KAOGPO_01788;MFDKLE_02469;NBICIC_01583;NHJIOO_01725;NPNGCM_02488;OFKADD_01643;PCBIPO_01834;PDOPEE_01807 adenylosuccinate synthase
16 yidK gene_presence_absence yidK yidK | HMPREF0351_RS07790 | none confidence yidK Putative symporter YidK HMPREF0351_RS07790 RDD family protein none 23.85 1.13 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=23.85; coverage=1.13 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity complement(1595717..1596376) matched_representative_sequence=yidK BFAOAP_01863;BJKGBB_01789;DHOPGE_01829;DNHFDD_02444;GBBODN_01871;HKAALB_01489;IIIHAF_01866;JAOBDG_01654;JHCCBL_01793;KAOGPO_01784;MFDKLE_02473;NBICIC_01587;NHJIOO_01729;NPNGCM_02492;OFKADD_01639;PCBIPO_01830;PDOPEE_01803 RDD family protein
17 group_680 gene_presence_absence group_680 group_680 | HMPREF0351_RS01545 | none confidence group_680 PTS EIIB type-3 domain-containing protein HMPREF0351_RS01545 PTS sugar transporter subunit IIB none 42.77 4.76 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=42.77; coverage=4.76 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 313977..314297 matched_representative_sequence=group_680 BFAOAP_01864;BJKGBB_01788;DHOPGE_01830;DNHFDD_02445;GBBODN_01872;HKAALB_01488;IIIHAF_01867;JAOBDG_01655;JHCCBL_01792;KAOGPO_01783;MFDKLE_02474;NBICIC_01588;NHJIOO_01730;NPNGCM_02493;OFKADD_01638;PCBIPO_01829;PDOPEE_01802 PTS sugar transporter subunit IIB
18 group_502 gene_presence_absence group_502 group_502 | HMPREF0351_RS00090 | none confidence group_502 3D-(35/4)-trihydroxycyclohexane-12-dione hydrolase HMPREF0351_RS00090 ZIP family metal transporter none 27.12 0.63 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.12; coverage=0.63 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.54 0.0189533 0.001102-0.326 0.00110195 0.325995 7.38e-08 15.8533 Panaroo/Bakta+GenBank nucleotide_similarity 22647..23465 matched_representative_sequence=group_502 BFAOAP_02956;BJKGBB_00691;DHOPGE_02906;DNHFDD_01029;GBBODN_02730;HKAALB_01388;IIIHAF_02776;JAOBDG_02687;JHCCBL_02754;KAOGPO_02978;MFDKLE_00887;NBICIC_02695;NHJIOO_02726;NPNGCM_01053;OFKADD_02803;PCBIPO_00776;PDOPEE_02981 ZIP family metal transporter
19 group_4436 gene_presence_absence group_4436 group_4436 | HMPREF0351_RS00745 | none confidence group_4436 Phosphonate ABC transporter ATP-binding protein HMPREF0351_RS00745 amino acid ABC transporter ATP-binding protein none 35.36 1.89 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=35.36; coverage=1.89 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity complement(149190..149930) matched_representative_sequence=group_4436 BFAOAP_02781;DAGPJG_02041;DHOPGE_02664;DNHFDD_02643;FBIILI_02572;GJOFNM_02639;HKAALB_02601;JAOBDG_02495;KAOGPO_02724;MFDKLE_02578;NBICIC_02485;NHJIOO_02535;NPNGCM_02696;OFKADD_02516;PCBIPO_02662;PDOPEE_02750;POKLJE_01911 amino acid ABC transporter ATP-binding protein
20 group_4435 gene_presence_absence frr group_4435 | HMPREF0351_RS08075 | none confidence frr ribosome recycling factor HMPREF0351_RS08075 frr ribosome recycling factor none 30.27 2.49 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=30.27; coverage=2.49 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity complement(1662402..1662959) matched_representative_sequence=group_4435 BFAOAP_02783;DAGPJG_02043;DHOPGE_02666;DNHFDD_02641;FBIILI_02570;GJOFNM_02641;HKAALB_02603;JAOBDG_02492;JAOBDG_02493;KAOGPO_02722;MFDKLE_02580;NBICIC_02487;NHJIOO_02537;NHJIOO_02538;NPNGCM_02698;OFKADD_02514;PCBIPO_02660;PDOPEE_02752;POKLJE_01913 ribosome recycling factor
21 group_4434 gene_presence_absence rplI group_4434 | HMPREF0351_RS00055 | none confidence rplI Bifunctional metallophosphatase/5'-nucleotidase HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 30.38 0.71 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=30.38; coverage=0.71 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=group_4434 BFAOAP_02777;DAGPJG_02037;DHOPGE_02660;DNHFDD_02647;FBIILI_02576;GJOFNM_02635;HKAALB_02597;JAOBDG_02499;KAOGPO_02728;MFDKLE_02574;NBICIC_02481;NHJIOO_02531;NPNGCM_02692;OFKADD_02520;PCBIPO_02666;PDOPEE_02746;POKLJE_01907 50S ribosomal protein L9
22 group_4433 gene_presence_absence phnE group_4433 | HMPREF0351_RS02580 | none confidence phnE Phosphonate ABC transporter permease PhnE HMPREF0351_RS02580 5'-methylthioadenosine/adenosylhomocysteinenucleosidase none 28.32 2.04 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=28.32; coverage=2.04 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 539268..539960 matched_representative_sequence=group_4433 BFAOAP_02779;DAGPJG_02039;DHOPGE_02662;DNHFDD_02645;FBIILI_02574;GJOFNM_02637;HKAALB_02599;JAOBDG_02497;KAOGPO_02726;MFDKLE_02576;NBICIC_02483;NHJIOO_02533;NPNGCM_02694;OFKADD_02518;PCBIPO_02664;PDOPEE_02748;POKLJE_01909 5'-methylthioadenosine/adenosylhomocysteinenucleosidase
23 phnE gene_presence_absence phnE phnE | HMPREF0351_RS00100 | none confidence phnE Phosphonate ABC transporter permease PhnE HMPREF0351_RS00100 TMEM175 family protein none 40.32 1.41 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=40.32; coverage=1.41 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 23934..24512 matched_representative_sequence=phnE BFAOAP_02780;DAGPJG_02040;DHOPGE_02663;DNHFDD_02644;FBIILI_02573;GJOFNM_02638;HKAALB_02600;JAOBDG_02496;KAOGPO_02725;MFDKLE_02577;NBICIC_02484;NHJIOO_02534;NPNGCM_02695;OFKADD_02517;PCBIPO_02663;PDOPEE_02749;POKLJE_01910 TMEM175 family protein
24 group_4432 gene_presence_absence group_4432 group_4432 | HMPREF0351_RS10960 | none confidence group_4432 Mur ligase family protein HMPREF0351_RS10960 Mur ligase family protein none 15.34 8.08 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=15.34; coverage=8.08 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 2246582..2247934 matched_representative_sequence=group_4432 BFAOAP_02776;DAGPJG_02036;DHOPGE_02659;DNHFDD_02648;FBIILI_02577;GJOFNM_02634;HKAALB_02596;JAOBDG_02500;KAOGPO_02729;MFDKLE_02573;NBICIC_02480;NHJIOO_02530;NPNGCM_02691;OFKADD_02521;PCBIPO_02667;PDOPEE_02745;POKLJE_01906 Mur ligase family protein
25 group_4431 gene_presence_absence group_4431 group_4431 | HMPREF0351_RS04215 | none confidence group_4431 aminopeptidase HMPREF0351_RS04215 aminopeptidase none 22.57 1.53 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=22.57; coverage=1.53 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity complement(861608..862840) matched_representative_sequence=group_4431 BFAOAP_02784;DAGPJG_02044;DHOPGE_02667;DNHFDD_02640;FBIILI_02569;GJOFNM_02642;HKAALB_02604;JAOBDG_02491;KAOGPO_02721;MFDKLE_02581;NBICIC_02488;NHJIOO_02539;NPNGCM_02699;OFKADD_02513;PCBIPO_02659;PDOPEE_02753;POKLJE_01914 aminopeptidase
26 group_4430 gene_presence_absence group_4430 group_4430 | HMPREF0351_RS00115 | none confidence group_4430 Solute-binding protein family 3/N-terminal domain-containing protein HMPREF0351_RS00115 acyltransferase domain-containing protein none 36.15 1.08 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=36.15; coverage=1.08 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 27767..28645 matched_representative_sequence=group_4430 BFAOAP_02782;DAGPJG_02042;DHOPGE_02665;DNHFDD_02642;FBIILI_02571;GJOFNM_02640;HKAALB_02602;JAOBDG_02494;KAOGPO_02723;MFDKLE_02579;NBICIC_02486;NHJIOO_02536;NPNGCM_02697;OFKADD_02515;PCBIPO_02661;PDOPEE_02751;POKLJE_01912 acyltransferase domain-containing protein
27 group_4429 gene_presence_absence group_4429 group_4429 | HMPREF0351_RS01465 | none confidence group_4429 Transposase;Transposase IS204/IS1001/IS1096/IS1165 DDE domain-containing protein HMPREF0351_RS01465 ISL3 family transposase none 97.45 17.52 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=97.45; coverage=17.52 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 293413..294708 matched_representative_sequence=group_4429 BFAOAP_02775;DAGPJG_02035;DHOPGE_02658;DNHFDD_02649;FBIILI_02578;GJOFNM_02633;HKAALB_02595;JAOBDG_02501;KAOGPO_02730;MFDKLE_02572;NBICIC_02479;NHJIOO_02529;NPNGCM_02690;OFKADD_02522;PCBIPO_02668;PDOPEE_02744;POKLJE_01905 ISL3 family transposase
28 group_4428 gene_presence_absence rplI group_4428 | HMPREF0351_RS00055 | none confidence rplI putative phosphohydrolases HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 35.16 1.24 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=35.16; coverage=1.24 0 50 0.0000 17 50 0.3400 controls (vancomycin sensitive) -4.7 0.0189533 0.001102-0.326 0.00110195 0.325995 9.55e-08 15.7414 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=group_4428 BFAOAP_02778;DAGPJG_02038;DHOPGE_02661;DNHFDD_02646;FBIILI_02575;GJOFNM_02636;HKAALB_02598;JAOBDG_02498;KAOGPO_02727;MFDKLE_02575;NBICIC_02482;NHJIOO_02532;NPNGCM_02693;OFKADD_02519;PCBIPO_02665;PDOPEE_02747;POKLJE_01908 50S ribosomal protein L9
29 group_3344 gene_presence_absence group_3344 group_3344 | HMPREF0351_RS01300 | none confidence group_3344 Restriction endonuclease;site-specific DNA-methyltransferase (adenine-specific) HMPREF0351_RS01300 hypothetical protein none 19.04 0.44 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=19.04; coverage=0.44 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity complement(262819..264018) matched_representative_sequence=group_3344 BFAOAP_02088;DAGPJG_02072;DHOPGE_01930;DNHFDD_01925;FBIILI_01795;GJOFNM_02269;HKAALB_01983;JAOBDG_02037;KAOGPO_02121;MFDKLE_02288;NBICIC_02081;NHJIOO_02003;NPNGCM_01940;NPNGCM_01941;OFKADD_01864;PCBIPO_01973;PDOPEE_01998 hypothetical protein
30 group_3240 gene_presence_absence group_3240 group_3240 | HMPREF0351_RS06620 | none confidence group_3240 DUF1788 domain-containing protein HMPREF0351_RS06620 ABC transporter ATP-binding protein none 29.25 3.12 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.25; coverage=3.12 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity 1355024..1355794 matched_representative_sequence=group_3240 BFAOAP_02090;DAGPJG_02070;DHOPGE_01932;DNHFDD_01923;FBIILI_01797;GJOFNM_02267;HKAALB_01981;JAOBDG_02039;KAOGPO_02123;MFDKLE_02290;NBICIC_02681;NHJIOO_02005;NPNGCM_01943;OFKADD_01866;PCBIPO_01971;PDOPEE_01996 ABC transporter ATP-binding protein
31 group_3198 gene_presence_absence group_3198 group_3198 | HMPREF0351_RS00100 | none confidence group_3198 DUF1819 domain-containing protein HMPREF0351_RS00100 TMEM175 family protein none 41.05 1.50 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=41.05; coverage=1.50 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity 23934..24512 matched_representative_sequence=group_3198 BFAOAP_02091;DAGPJG_02069;DHOPGE_01933;DNHFDD_01922;FBIILI_01798;GJOFNM_02266;HKAALB_01980;JAOBDG_02040;KAOGPO_02124;MFDKLE_02291;NBICIC_02680;NHJIOO_02006;NPNGCM_01944;OFKADD_01867;PCBIPO_01970;PDOPEE_01995 TMEM175 family protein
32 brxL gene_presence_absence brxL brxL | HMPREF0351_RS00575 | none confidence brxL BREX system Lon protease-like protein BrxL HMPREF0351_RS00575 WxLIP family cell surface protein none 12.77 0.74 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=12.77; coverage=0.74 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_similarity 114540..115637 matched_representative_sequence=brxL BFAOAP_02086;DAGPJG_02074;DHOPGE_01928;DNHFDD_01927;FBIILI_01793;GJOFNM_02271;HKAALB_01985;JAOBDG_02035;KAOGPO_02119;MFDKLE_02286;NBICIC_02083;NHJIOO_02001;NPNGCM_01938;OFKADD_01862;PCBIPO_01975;PDOPEE_02000 WxLIP family cell surface protein
33 group_154 gene_presence_absence HMPREF0351_RS08435 (group_154) group_154 | HMPREF0351_RS08435 | high confidence group_154 TIGR02687 family protein HMPREF0351_RS08435 hypothetical protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 1731559..1731798 matched_representative_sequence=group_1548 BFAOAP_02087;DAGPJG_02073;DHOPGE_01929;DNHFDD_01926;FBIILI_01794;GJOFNM_02270;HKAALB_01984;JAOBDG_02036;KAOGPO_02120;MFDKLE_02287;NBICIC_02082;NHJIOO_02002;NPNGCM_01939;OFKADD_01863;PCBIPO_01974;PDOPEE_01999 hypothetical protein
34 group_22 gene_presence_absence HMPREF0351_RS14940 (group_22) group_22 | HMPREF0351_RS14940 | high confidence group_22 hypothetical protein HMPREF0351_RS14940 hypothetical protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.69 0.0207021 0.001202-0.3567 0.00120151 0.356698 9.43e-08 15.6196 Panaroo/Bakta+GenBank nucleotide_exact_or_contained complement(820799..820963) matched_representative_sequence=group_2277 BFAOAP_02089;DAGPJG_02071;DHOPGE_01931;DNHFDD_01924;FBIILI_01796;GJOFNM_02268;HKAALB_01982;JAOBDG_02038;KAOGPO_02122;MFDKLE_02289;NBICIC_02682;NHJIOO_02004;NPNGCM_01942;OFKADD_01865;PCBIPO_01972;PDOPEE_01997 hypothetical protein
35 group_1089 gene_presence_absence group_1089 group_1089 | HMPREF0351_RS00115 | none confidence group_1089 methylmalonate-semialdehyde dehydrogenase (CoA acylating) HMPREF0351_RS00115 acyltransferase domain-containing protein none 32.13 0.76 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.13; coverage=0.76 0 50 0.0000 16 50 0.3200 controls (vancomycin sensitive) -4.54 0.0207021 0.001202-0.3567 0.00120151 0.356698 1.52e-07 15.4122 Panaroo/Bakta+GenBank nucleotide_similarity 27767..28645 matched_representative_sequence=group_1089 BFAOAP_01858;DHOPGE_01824;DNHFDD_02439;GBBODN_01866;HKAALB_01494;IIIHAF_01861;JAOBDG_01649;JHCCBL_01798;KAOGPO_01789;MFDKLE_02468;NBICIC_01582;NHJIOO_01724;NPNGCM_02487;OFKADD_01644;PCBIPO_01835;PDOPEE_01808 acyltransferase domain-containing protein
36 group_507 gene_presence_absence group_507 group_507 | HMPREF0351_RS00590 | none confidence group_507 HTH arsR-type domain-containing protein HMPREF0351_RS00590 hypothetical protein none 32.17 5.15 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.17; coverage=5.15 17 50 0.3400 0 50 0.0000 cases (vancomycin resistant) 3.93 52.7612 3.068-907.5 3.06753 907.486 7.43e-07 14.8504 Panaroo/Bakta+GenBank nucleotide_similarity 117803..118759 matched_representative_sequence=group_507 EAHGHC_02516;EBMNDJ_02628;EMDJIL_02473;FIOBDN_02840;FNLDHP_02912;GCGADK_02812;HOGLGD_02598;KFIHCG_02585;LKPDJB_02397;MHHDHD_02725;NBNIPB_02288;NJLMCP_02696;ODBCAF_02632;ODHHNB_02742;OOIKMG_02607;OPKPKN_02932;PDKMDO_02784 hypothetical protein
37 group_3842 gene_presence_absence HMPREF0351_RS02895 (group_3842) group_3842 | HMPREF0351_RS02895 | high confidence group_3842 Bacteriocin HMPREF0351_RS02895 hypothetical protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 49 50 0.9800 28 50 0.5600 cases (vancomycin resistant) 3.46 26.0526 4.684-144.9 4.68446 144.892 9.14e-08 14.7424 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 611127..611555 matched_representative_sequence=group_3842 AAEDFP_02838;AKJFEH_02577;BBAPLL_02494;BCEGCL_02464;BIDKHD_01716;BJIIEG_00003;BJKGBB_02048;BNFCCO_00292;BOPMCK_00608;BPDKHC_02170;CDPMCH_02369;CHGPCO_02468;CMDIKE_00358;CMNCGK_02305;COMFNP_00004;DAGLGK_00386;DEFBHI_00687;DFLILH_00483;DJAJGG_00635;DNAMMH_00975;DPGNPC_00329;EAHGHC_02453;EBMNDJ_00370;EDPIJB_02525;EJLAKB_00361;EMDJIL_02418;FAEPFC_00236;FIOBDN_00123;FNLDHP_02727;FOJCEI_00139 hypothetical protein
38 group_2907 gene_presence_absence group_2907 group_2907 | HMPREF0351_RS10780 | none confidence group_2907 Metallo-beta-lactamase domain-containing protein HMPREF0351_RS10780 ABC transporter ATP-binding protein none 24.84 2.06 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=24.84; coverage=2.06 5 50 0.1000 26 50 0.5200 controls (vancomycin sensitive) -4.2 0.111756 0.03944-0.3166 0.0394425 0.316649 2.85e-09 14.7067 Panaroo/Bakta+GenBank nucleotide_similarity complement(2209957..2210910) matched_representative_sequence=group_2907 AAEDFP_00581;BFAOAP_00108;BIDKHD_00681;BNFCCO_01311;COMFNP_00696;DAGPJG_01847;DHOPGE_00211;DNAMMH_03006;DNHFDD_00108;EJLAKB_01154;FABDMP_01956;FBIILI_02823;FMBLNF_01918;GEMMFG_01106;GJOFNM_00754;HKAALB_02136;IGDGNK_00882;JABKKB_00780;JAOBDG_00877;JFOMPD_00679;KAOGPO_02016;MBMNML_00745;MFDKLE_00222;NBBOMM_01556;NBICIC_00640;NHJIOO_02857;NPDFDF_01328;NPNGCM_00101;OFKADD_00622;PCBIPO_00222 ABC transporter ATP-binding protein
39 group_3039 gene_presence_absence group_3039 group_3039 | HMPREF0351_RS08650 | none confidence group_3039 Ribitol-5-phosphate cytidylyltransferase HMPREF0351_RS08650 IS3 family transposase none 30.33 2.14 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=30.33; coverage=2.14 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.36 0.0249232 0.00144-0.4314 0.00143991 0.431393 8.4e-07 14.4021 Panaroo/Bakta+GenBank nucleotide_similarity complement(join(1770080..1770966,1770966..1771242)) matched_representative_sequence=group_3039 AKJFEH_02605;BJIIEG_01972;BPDKHC_02577;CDPMCH_02069;CMNCGK_02015;EDPIJB_02007;FBIILI_02004;FOJCEI_02183;GBBODN_02613;GEMMFG_01006;HBFAPG_01961;JHCCBL_02519;JJJGHN_02031;MECBCD_01923 IS3 family transposase
40 group_569 gene_presence_absence group_569 group_569 | HMPREF0351_RS06800 | none confidence group_569 LicD/FKTN/FKRP nucleotidyltransferase domain-containing protein HMPREF0351_RS06800 DUF6530 family protein none 18.44 1.83 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=18.44; coverage=1.83 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.36 0.0249232 0.00144-0.4314 0.00143991 0.431393 8.4e-07 14.4021 Panaroo/Bakta+GenBank nucleotide_similarity complement(1400022..1400501) matched_representative_sequence=group_569 AKJFEH_02606;BJIIEG_01973;BPDKHC_02578;CDPMCH_02068;CMNCGK_02016;EDPIJB_02008;FBIILI_02005;FOJCEI_02184;GBBODN_02612;GEMMFG_01005;HBFAPG_01962;JHCCBL_02520;JJJGHN_02030;MECBCD_01922 DUF6530 family protein
41 group_568 gene_presence_absence group_568 group_568 | HMPREF0351_RS10645 | none confidence group_568 NAD-dependent epimerase/dehydratase domain-containing protein HMPREF0351_RS10645 SIS domain-containing protein none 25.43 1.40 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=25.43; coverage=1.40 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.36 0.0249232 0.00144-0.4314 0.00143991 0.431393 8.4e-07 14.4021 Panaroo/Bakta+GenBank nucleotide_similarity complement(2179811..2180425) matched_representative_sequence=group_568 AKJFEH_02604;BJIIEG_01971;BPDKHC_02576;CDPMCH_02070;CMNCGK_02014;EDPIJB_02006;FBIILI_02003;FOJCEI_02182;GBBODN_02614;GEMMFG_01007;HBFAPG_01960;JHCCBL_02518;JJJGHN_02032;MECBCD_01924 SIS domain-containing protein
42 group_820 gene_presence_absence group_820 group_820 | HMPREF0351_RS05415 | none confidence group_820 hypothetical protein;Type II toxin-antitoxin system RelE/ParE family toxin HMPREF0351_RS05415 hypothetical protein none 28.37 5.90 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=28.37; coverage=5.90 16 50 0.3200 0 50 0.0000 cases (vancomycin resistant) 3.84 48.3043 2.803-832.3 2.80349 832.287 1.86e-06 14.3246 Panaroo/Bakta+GenBank nucleotide_similarity 1105471..1105746 matched_representative_sequence=group_820 EAHGHC_02518;EBMNDJ_02630;EMDJIL_02471;FIOBDN_02842;FNLDHP_02914;GCGADK_02810;HOGLGD_02600;KFIHCG_02587;LKPDJB_02395;MHHDHD_02723;NBNIPB_02286;NJLMCP_02698;ODBCAF_02634;ODHHNB_02740;OOIKMG_02609;PDKMDO_02786 hypothetical protein
43 group_508 gene_presence_absence abrB group_508 | HMPREF0351_RS00825 | none confidence abrB AbrB family transcriptional regulator HMPREF0351_RS00825 YjjG family noncanonical pyrimidinenucleotidase none 30.02 4.55 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=30.02; coverage=4.55 16 50 0.3200 0 50 0.0000 cases (vancomycin resistant) 3.84 48.3043 2.803-832.3 2.80349 832.287 1.86e-06 14.3246 Panaroo/Bakta+GenBank nucleotide_similarity 166745..167440 matched_representative_sequence=group_508 EAHGHC_02517;EBMNDJ_02629;EMDJIL_02472;FIOBDN_02841;FNLDHP_02913;GCGADK_02811;HOGLGD_02599;KFIHCG_02586;LKPDJB_02396;MHHDHD_02724;NBNIPB_02287;NJLMCP_02697;ODBCAF_02633;ODHHNB_02741;OOIKMG_02608;PDKMDO_02785 YjjG family noncanonical pyrimidinenucleotidase
44 group_280 gene_presence_absence trxA group_280 | HMPREF0351_RS09985 | high confidence trxA Type I restriction enzyme endonuclease subunit;hypothetical protein HMPREF0351_RS09985 trxA thioredoxin high 100.00 100.00 High-confidence GenBank-supported annotation. identity=100.00; coverage=100.00 48 50 0.9600 28 50 0.5600 cases (vancomycin resistant) 3.65 15.3158 3.83-61.25 3.82955 61.2536 6.08e-08 14.1530 Panaroo/Bakta+GenBank nucleotide_exact_or_contained complement(2047692..2048006) matched_representative_sequence=group_2803 12_refound_188_pseudo;14_refound_210_pseudo;19_refound_285_pseudo;21_refound_312_pseudo;22_refound_319_pseudo;23_refound_332_pseudo;26_refound_374_pseudo;28_refound_395_pseudo;31_refound_444_pseudo;BBAPLL_02490;BCEGCL_02460;BJIIEG_00457;BJKGBB_02044;BNFCCO_02964;BOPMCK_00612;CHGPCO_02295;CMDIKE_02842;DAGLGK_01960;DJAJGG_02685;DNAMMH_02926;DPGNPC_02023;EAHGHC_02449;EBMNDJ_00898;EMDJIL_02414;FABDMP_01806;FAEPFC_02079;FIOBDN_02082;FMBLNF_01815;FNLDHP_02723;FOJCEI_02823 thioredoxin
45 group_71 gene_presence_absence HMPREF0351_RS09930 (group_71) group_71 | HMPREF0351_RS09930 | high confidence group_71 V-type ATP synthase subunit F HMPREF0351_RS09930 V-type ATP synthase subunit F high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 0 50 0.0000 14 50 0.2800 controls (vancomycin sensitive) -4.14 0.0249232 0.00144-0.4314 0.00143991 0.431393 2.19e-06 13.9859 Panaroo/Bakta+GenBank nucleotide_exact_or_contained complement(2035299..2035610) matched_representative_sequence=group_717 BFAOAP_01505;CDPMCH_01825;DHOPGE_01941;DNHFDD_01768;FBIILI_02395;HKAALB_01880;JAOBDG_01175;MFDKLE_01687;NBICIC_01547;NHJIOO_01624;NPNGCM_01737;OFKADD_01696;PCBIPO_01708;PDOPEE_01746 V-type ATP synthase subunit F
46 group_4193 gene_presence_absence mreD group_4193 | HMPREF0351_RS12305 | none confidence mreD Transposase IS204/IS1001/IS1096/IS1165 DDE domain-containing protein HMPREF0351_RS12305 mreD rod shape-determining protein MreD none 36.99 4.37 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=36.99; coverage=4.37 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(2540070..2540579) matched_representative_sequence=group_4193 AKJFEH_02651;BPDKHC_02452;CDPMCH_02661;CMNCGK_02567;EDPIJB_02552;FABDMP_02462;FMBLNF_02490;GBBODN_02539;HBFAPG_02510;JHCCBL_02542;JJJGHN_02594;MECBCD_02486;NBBOMM_02474 rod shape-determining protein MreD
47 group_4192 gene_presence_absence rnmV group_4192 | HMPREF0351_RS10740 | none confidence rnmV Phosphotransferase system EIIB component type 2/3 domain-containing protein HMPREF0351_RS10740 rnmV ribonuclease M5 none 29.00 4.90 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=29.00; coverage=4.90 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(2201122..2201691) matched_representative_sequence=group_4192 AKJFEH_02647;BPDKHC_02456;CDPMCH_02665;CMNCGK_02571;EDPIJB_02556;FABDMP_02466;FMBLNF_02486;GBBODN_02535;HBFAPG_02506;JHCCBL_02546;JJJGHN_02590;MECBCD_02490;NBBOMM_02478 ribonuclease M5
48 group_4191 gene_presence_absence spxB group_4191 | HMPREF0351_RS00085 | none confidence spxB pyruvate oxidase HMPREF0351_RS00085 spxB pyruvate oxidase none 27.53 0.57 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=27.53; coverage=0.57 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(20752..22482) matched_representative_sequence=group_4191 AKJFEH_02644;BPDKHC_02459;CDPMCH_02668;CMNCGK_02574;EDPIJB_02559;FABDMP_02469;FMBLNF_02483;GBBODN_02532;HBFAPG_02503;JHCCBL_02549;JJJGHN_02587;MECBCD_02493;NBBOMM_02481 pyruvate oxidase
49 group_4190 gene_presence_absence group_4190 group_4190 | HMPREF0351_RS00120 | none confidence group_4190 putative metal homeostasis protein HMPREF0351_RS00120 putative metal homeostasis protein none 45.41 7.78 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=45.41; coverage=7.78 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 29121..29237 matched_representative_sequence=group_4190 AKJFEH_02642;BPDKHC_02461;CDPMCH_02670;CMNCGK_02576;EDPIJB_02561;FABDMP_02471;FMBLNF_02481;GBBODN_02530;HBFAPG_02501;JHCCBL_02551;JJJGHN_02585;MECBCD_02495;NBBOMM_02483 putative metal homeostasis protein
50 group_4189 gene_presence_absence yaaA group_4189 | HMPREF0351_RS00015 | none confidence yaaA S4 domain-containing protein YaaA HMPREF0351_RS00015 yaaA S4 domain-containing protein YaaA none 46.62 7.53 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=46.62; coverage=7.53 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 2962..3204 matched_representative_sequence=group_4189 AKJFEH_02643;BPDKHC_02460;CDPMCH_02669;CMNCGK_02575;EDPIJB_02560;FABDMP_02470;FMBLNF_02482;GBBODN_02531;HBFAPG_02502;JHCCBL_02550;JJJGHN_02586;MECBCD_02494;NBBOMM_02482 S4 domain-containing protein YaaA
51 group_4188 gene_presence_absence group_4188 group_4188 | HMPREF0351_RS09540 | none confidence group_4188 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase HMPREF0351_RS09540 YtxH domain-containing protein none 31.10 2.46 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=31.10; coverage=2.46 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(1962397..1962999) matched_representative_sequence=group_4188 AKJFEH_02645;BPDKHC_02458;CDPMCH_02667;CMNCGK_02573;EDPIJB_02558;FABDMP_02468;FMBLNF_02484;GBBODN_02533;HBFAPG_02504;JHCCBL_02548;JJJGHN_02588;MECBCD_02492;NBBOMM_02480 YtxH domain-containing protein
52 group_4187 gene_presence_absence group_4187 group_4187 | HMPREF0351_RS04710 | none confidence group_4187 PTS EIIC type-2 domain-containing protein HMPREF0351_RS04710 hypothetical protein none 32.29 1.33 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.29; coverage=1.33 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 960595..961242 matched_representative_sequence=group_4187 AKJFEH_02648;BPDKHC_02455;CDPMCH_02664;CMNCGK_02570;EDPIJB_02555;FABDMP_02465;FMBLNF_02487;GBBODN_02536;HBFAPG_02507;JHCCBL_02545;JJJGHN_02591;MECBCD_02489;NBBOMM_02477 hypothetical protein
53 group_4186 gene_presence_absence acpP group_4186 | HMPREF0351_RS00470 | none confidence acpP acyl carrier protein HMPREF0351_RS00470 acpP acyl carrier protein none 32.11 4.55 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=32.11; coverage=4.55 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 89046..89288 matched_representative_sequence=group_4186 AKJFEH_02641;BPDKHC_02462;CDPMCH_02671;CMNCGK_02577;EDPIJB_02562;FABDMP_02754;FMBLNF_02759;GBBODN_02529;HBFAPG_02500;JHCCBL_02552;JJJGHN_02584;MECBCD_02496;NBBOMM_02810 acyl carrier protein
54 group_4185 gene_presence_absence pplA group_4185 | HMPREF0351_RS12860 | none confidence pplA extracellular electron transfer flavoproteinPplA HMPREF0351_RS12860 pplA extracellular electron transfer flavoproteinPplA none 19.87 4.19 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=19.87; coverage=4.19 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 2663012..2663947 matched_representative_sequence=group_4185 AKJFEH_02646;BPDKHC_02457;CDPMCH_02666;CMNCGK_02572;EDPIJB_02557;FABDMP_02467;FMBLNF_02485;GBBODN_02534;HBFAPG_02505;JHCCBL_02547;JJJGHN_02589;MECBCD_02491;NBBOMM_02479 extracellular electron transfer flavoproteinPplA
55 group_4184 gene_presence_absence group_4184 group_4184 | HMPREF0351_RS00110 | none confidence group_4184 D-galactonate dehydratase HMPREF0351_RS00110 FUSC family protein none 29.33 0.96 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.33; coverage=0.96 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 26419..27444 matched_representative_sequence=group_4184 AKJFEH_02649;BPDKHC_02454;CDPMCH_02663;CMNCGK_02569;EDPIJB_02554;FABDMP_02464;FMBLNF_02488;GBBODN_02537;HBFAPG_02508;JHCCBL_02544;JJJGHN_02592;MECBCD_02488;NBBOMM_02476 FUSC family protein
56 group_4183 gene_presence_absence group_4183 group_4183 | HMPREF0351_RS08095 | none confidence group_4183 Phosphotriesterase HMPREF0351_RS08095 arginine repressor none 16.49 1.77 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=16.49; coverage=1.77 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 1665941..1666420 matched_representative_sequence=group_4183 AKJFEH_02650;BPDKHC_02453;CDPMCH_02662;CMNCGK_02568;EDPIJB_02553;FABDMP_02463;FMBLNF_02489;GBBODN_02538;HBFAPG_02509;JHCCBL_02543;JJJGHN_02593;MECBCD_02487;NBBOMM_02475 arginine repressor
57 group_3332 gene_presence_absence murB group_3332 | HMPREF0351_RS03235 | none confidence murB UDP-N-acetylmuramate dehydrogenase HMPREF0351_RS03235 murB UDP-N-acetylmuramate dehydrogenase none 5.23 2.88 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=5.23; coverage=2.88 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 684086..685021 matched_representative_sequence=group_3332 AKJFEH_02870;BPDKHC_02688;CDPMCH_02891;CMNCGK_02774;EDPIJB_02768;FABDMP_01807;FMBLNF_01816;GBBODN_00297;HBFAPG_02764;JHCCBL_00629;JJJGHN_02821;MECBCD_02756;NBBOMM_01855 UDP-N-acetylmuramate dehydrogenase
58 group_2801 gene_presence_absence group_2801 group_2801 | HMPREF0351_RS00075 | none confidence group_2801 Transposase HMPREF0351_RS00075 ABC-F family ATP-binding cassettedomain-containing protein none 20.24 1.81 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=20.24; coverage=1.81 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity complement(18174..19796) matched_representative_sequence=group_2801 AKJFEH_01972;BPDKHC_01633;CDPMCH_01730;CMNCGK_01708;EDPIJB_01851;FABDMP_01417;FMBLNF_01435;GBBODN_02129;HBFAPG_01811;JHCCBL_02014;JJJGHN_01672;MECBCD_01614;NBBOMM_01640 ABC-F family ATP-binding cassettedomain-containing protein
59 group_1205 gene_presence_absence ssb group_1205 | HMPREF0351_RS00040 | none confidence ssb PTS system trehalose-specific EIIBC component HMPREF0351_RS00040 ssb single-stranded DNA-binding protein none 32.14 0.78 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=32.14; coverage=0.78 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.38 0.0275028 0.001584-0.4774 0.00158426 0.477448 1.73e-06 13.9462 Panaroo/Bakta+GenBank nucleotide_similarity 9334..9846 matched_representative_sequence=group_1205 AKJFEH_02869;BPDKHC_02687;CDPMCH_02890;CMNCGK_02773;EDPIJB_02769;FABDMP_01808;FMBLNF_01817;GBBODN_00296;HBFAPG_02765;JHCCBL_00628;JJJGHN_02822;MECBCD_02755;NBBOMM_01856 single-stranded DNA-binding protein
60 group_3755 gene_presence_absence group_3755 group_3755 | HMPREF0351_RS10785 | none confidence group_3755 Transposase;DNA polymerase III beta subunit HMPREF0351_RS10785 ABC transporter ATP-binding protein none 13.22 0.51 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=13.22; coverage=0.51 15 50 0.3000 0 50 0.0000 cases (vancomycin resistant) 3.87 44.0986 2.554-761.4 2.55406 761.408 3.49e-06 13.9198 Panaroo/Bakta+GenBank nucleotide_similarity complement(2210900..2211970) matched_representative_sequence=group_3755 BCEGCL_02842;FIOBDN_02757;FNLDHP_02959;GCGADK_02775;JAJEAH_01990;JGBMCF_02009;JJIELG_02218;LJIIAA_02679;MMOFNP_01989;NBNIPB_02297;NCCLJD_01977;ODBCAF_02701;ODHHNB_02695;OIGEFE_02004;PDKMDO_02744 ABC transporter ATP-binding protein
61 group_1150 gene_presence_absence group_1150 group_1150 | HMPREF0351_RS07080 | none confidence group_1150 hypothetical protein HMPREF0351_RS07080 hypothetical protein none 15.24 4.68 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=15.24; coverage=4.68 5 50 0.1000 28 50 0.5600 controls (vancomycin sensitive) -2.92 0.0954309 0.03362-0.2709 0.03362 0.270882 3.5e-08 13.8453 Panaroo/Bakta+GenBank nucleotide_similarity complement(<1457531..1457818) matched_representative_sequence=group_1150 27_refound_386_pseudo;AKJFEH_00289;BFAOAP_02202;BIDKHD_00548;BNFCCO_00963;BPDKHC_00346;CDPMCH_00637;CMNCGK_00496;DAGPJG_02246;DAGPJG_02914;DHOPGE_00596;DNAMMH_00793;DNHFDD_02310;EDPIJB_00545;EJLAKB_01772;FBIILI_00291;FOJCEI_00632;GJOFNM_02347;GJOFNM_02972;HBFAPG_00399;HKAALB_01061;IAFNHG_01904;IGDGNK_01449;IIIHAF_01362;IPIGJP_01929;JABKKB_00647;JFOMPD_01260;JJJGHN_00446;KAOGPO_00171;MECBCD_02003 hypothetical protein
62 group_3557 gene_presence_absence group_3557 group_3557 | HMPREF0351_RS00110 | none confidence group_3557 O-antigen ligase-related domain-containing protein;hypothetical protein HMPREF0351_RS00110 FUSC family protein none 33.25 0.85 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.25; coverage=0.85 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.27 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.3e-06 13.8226 Panaroo/Bakta+GenBank nucleotide_similarity 26419..27444 matched_representative_sequence=group_3557 AKJFEH_02640;BJIIEG_01966;BPDKHC_02494;CDPMCH_02075;CMNCGK_02009;EDPIJB_02001;FBIILI_01998;FOJCEI_02177;GBBODN_01840;HBFAPG_01955;JHCCBL_02541;JJJGHN_02037;MECBCD_01929 FUSC family protein
63 group_2519 gene_presence_absence group_2519 group_2519 | HMPREF0351_RS01750 | none confidence group_2519 Glycosyl transferase family 2 HMPREF0351_RS01750 hypothetical protein none 25.02 1.55 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=25.02; coverage=1.55 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.27 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.3e-06 13.8226 Panaroo/Bakta+GenBank nucleotide_similarity 353906..354130 matched_representative_sequence=group_2519 AKJFEH_02603;BJIIEG_01970;BPDKHC_02575;CDPMCH_02071;CMNCGK_02013;EDPIJB_02005;FBIILI_02002;FOJCEI_02181;GBBODN_02615;HBFAPG_01959;JHCCBL_02517;JJJGHN_02033;MECBCD_01925 hypothetical protein
64 group_2499 gene_presence_absence rimI group_2499 | HMPREF0351_RS08145 | none confidence rimI Glycosyl transferase HMPREF0351_RS08145 rimI ribosomal protein S18-alanineN-acetyltransferase none 21.11 1.64 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=21.11; coverage=1.64 0 50 0.0000 13 50 0.2600 controls (vancomycin sensitive) -4.27 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.3e-06 13.8226 Panaroo/Bakta+GenBank nucleotide_similarity complement(1677148..1677612) matched_representative_sequence=group_2499 26_refound_366_pseudo;AKJFEH_02602;BJIIEG_01969;CDPMCH_02072;CMNCGK_02012;EDPIJB_02004;FBIILI_02001;FOJCEI_02180;GBBODN_02616;HBFAPG_01958;JHCCBL_02516;JJJGHN_02034;MECBCD_01926 ribosomal protein S18-alanineN-acetyltransferase
65 vanYA gene_presence_absence vanY-A vanYA | HMPREF0351_RS00070 | none confidence vanY-A D-Ala-D-Ala carboxypeptidase VanY-A HMPREF0351_RS00070 DegV family protein none 37.05 0.99 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=37.05; coverage=0.99 28 50 0.5600 4 50 0.0800 cases (vancomycin resistant) 2.73 13.0889 4.295-39.89 4.29472 39.8906 9.15e-08 13.7488 Panaroo/Bakta+GenBank nucleotide_similarity 17182..18045 matched_representative_sequence=vanYA BBAPLL_02878;DAGPJG_02754;DPGNPC_03024;EAHGHC_02514;EBMNDJ_02626;EMDJIL_02475;FAEPFC_03007;FIOBDN_02838;FNLDHP_02910;GBBODN_02594;GCGADK_02814;GJOFNM_02703;HOGLGD_02596;JAJEAH_01983;JGBMCF_02002;JHCCBL_02629;JJIELG_02225;KFIHCG_02583;LJIIAA_03088;LKPDJB_02399;LNBAGD_02788;MHHDHD_02727;MMOFNP_01982;NBNIPB_02290;NCCLJD_01984;NJLMCP_02694;ODBCAF_02630;ODHHNB_02744;OIGEFE_01997;OOIKMG_02605 DegV family protein
66 group_2963 gene_presence_absence truA group_2963 | HMPREF0351_RS01490 | none confidence truA tRNA pseudouridine synthase A HMPREF0351_RS01490 truA tRNA pseudouridine(38-40) synthase TruA none 95.49 9.41 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=95.49; coverage=9.41 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity 300227..300967 matched_representative_sequence=group_2963 AAEDFP_02198;AKJFEH_02321;BFAOAP_02793;BIDKHD_01648;BJIIEG_02383;BJKGBB_02289;BNFCCO_01195;BODMBB_02481;BOPMCK_01796;BPDKHC_02237;CDPMCH_02393;CHGPCO_02202;CMDIKE_01961;CMNCGK_02329;COMFNP_00656;DAGLGK_00181;DAGPJG_02688;DEFBHI_01530;DFLILH_02109;DHOPGE_02715;DJAJGG_02478;DNAMMH_00619;DNHFDD_02689;DPGNPC_01191;EBMNDJ_01079;EDPIJB_02238;EJLAKB_01112;FABDMP_01117;FAEPFC_01244;FBIILI_01241 tRNA pseudouridine(38-40) synthase TruA
67 group_1692 gene_presence_absence group_1692 group_1692 | HMPREF0351_RS01485 | none confidence group_1692 DUF998 domain-containing protein HMPREF0351_RS01485 DUF998 domain-containing protein none 96.38 13.05 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=96.38; coverage=13.05 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity 299401..300036 matched_representative_sequence=group_1692 AAEDFP_02199;AKJFEH_02322;BFAOAP_02794;BIDKHD_01647;BJIIEG_02382;BJKGBB_02288;BNFCCO_01194;BODMBB_02482;BOPMCK_01797;BPDKHC_02236;CDPMCH_02392;CHGPCO_02201;CMDIKE_01960;CMNCGK_02328;COMFNP_00655;DAGLGK_00182;DAGPJG_02687;DEFBHI_01529;DFLILH_02110;DHOPGE_02714;DJAJGG_02479;DNAMMH_00618;DNHFDD_02690;DPGNPC_01190;EBMNDJ_01080;EDPIJB_02239;EJLAKB_01111;FABDMP_01111;FAEPFC_01243;FBIILI_01240 DUF998 domain-containing protein
68 sstT gene_presence_absence sstT sstT | HMPREF0351_RS01480 | high confidence ;sstT hypothetical protein;Serine/threonine transporter SstT;Na(+)/serine-threonine symporter HMPREF0351_RS01480 sstT serine/threonine transporter SstT high 100.0 100.0 High-confidence GenBank-supported annotation. identity=100.0; coverage=100.0 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank qualifier_exact 298034..299254 AAEDFP_02200;AKJFEH_02323;BFAOAP_02795;BIDKHD_01646;BJIIEG_02381;BJKGBB_02287;BNFCCO_01193;BODMBB_02483;BOPMCK_01798;BPDKHC_02235;CDPMCH_02391;CHGPCO_02200;CMDIKE_01959;CMNCGK_02327;COMFNP_00654;DAGLGK_00183;DAGPJG_02686;DEFBHI_01528;DFLILH_02111;DHOPGE_02713;DJAJGG_02480;DNAMMH_00617;DNHFDD_02691;DPGNPC_01189;EBMNDJ_01081;EDPIJB_02240;EJLAKB_01110;FABDMP_01110;FABDMP_02499;FAEPFC_01242 serine/threonine transporter SstT
69 group_1374 gene_presence_absence group_1374 group_1374 | HMPREF0351_RS08610 | none confidence group_1374 NADP-dependent oxidoreductase domain-containing protein;hypothetical protein;Putative ion-channel protein HMPREF0351_RS08610 PTS system mannose/fructose/sorbose familytransporter subunit IID none 33.22 1.62 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.22; coverage=1.62 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity complement(1760028..1760819) matched_representative_sequence=group_1374 AAEDFP_00850;AKJFEH_02317;AKJFEH_02318;BFAOAP_02942;BIDKHD_01653;BJIIEG_00673;BJKGBB_02292;BJKGBB_02293;BNFCCO_01200;BODMBB_02477;BODMBB_02478;BOPMCK_01791;BOPMCK_01792;BPDKHC_02240;BPDKHC_02241;CDPMCH_02396;CDPMCH_02397;CHGPCO_01757;CMDIKE_01966;CMNCGK_02332;CMNCGK_02333;COMFNP_00661;DAGLGK_00176;DAGPJG_02778;DEFBHI_02312;DFLILH_02105;DFLILH_02106;DHOPGE_02901;DJAJGG_02474;DJAJGG_02475 PTS system mannose/fructose/sorbose familytransporter subunit IID
70 group_1327 gene_presence_absence group_1327 group_1327 | HMPREF0351_RS01535 | none confidence group_1327 hypothetical protein;Permease IIC component HMPREF0351_RS01535 PTS sugar transporter subunit IIC none 91.83 17.37 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=91.83; coverage=17.37 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_similarity 310765..312081 matched_representative_sequence=group_1327 AAEDFP_00852;AKJFEH_02315;BFAOAP_02897;BIDKHD_01655;BJIIEG_00675;BJKGBB_02295;BNFCCO_01202;BODMBB_02475;BOPMCK_01789;BPDKHC_02243;CDPMCH_02399;CHGPCO_01755;CMDIKE_01968;CMNCGK_02335;COMFNP_00663;DAGLGK_00174;DAGPJG_00162;DEFBHI_02314;DFLILH_02103;DHOPGE_00294;DJAJGG_02472;DNAMMH_00626;DNHFDD_00349;DPGNPC_01198;EBMNDJ_01072;EDPIJB_02232;EJLAKB_01119;FABDMP_01121;FAEPFC_01251;FBIILI_01248 PTS sugar transporter subunit IIC
71 group_669 gene_presence_absence HMPREF0351_RS01460 (group_669) group_669 | HMPREF0351_RS01460 | high confidence group_669 DUF4767 domain-containing protein;hypothetical protein HMPREF0351_RS01460 DUF4767 domain-containing protein high 100.00 94.47 High-confidence locus-level GenBank rescue. identity=100.00; coverage=94.47 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 292498..293214 matched_representative_sequence=group_669 AAEDFP_02203;AKJFEH_02324;BFAOAP_03100;BIDKHD_01643;BJIIEG_02380;BJKGBB_02286;BNFCCO_01190;BODMBB_02484;BOPMCK_01799;BPDKHC_02234;CDPMCH_02390;CHGPCO_02197;CMDIKE_01956;CMNCGK_02326;COMFNP_00651;DAGLGK_00186;DAGPJG_02938;DEFBHI_01525;DFLILH_02112;DHOPGE_03080;DJAJGG_02481;DNAMMH_00614;DNHFDD_03040;DPGNPC_01186;EBMNDJ_01084;EDPIJB_02241;EJLAKB_01107;FABDMP_02498;FAEPFC_01239;FBIILI_01235 DUF4767 domain-containing protein
72 msrA gene_presence_absence msrA msrA | HMPREF0351_RS12740 | high confidence msrA; Peptide methionine sulfoxide reductase MsrA;hypothetical protein HMPREF0351_RS12740 msrA peptide-methionine (S)-S-oxide reductase MsrA high 100.0 100.0 High-confidence GenBank-supported annotation. identity=100.0; coverage=100.0 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank qualifier_exact complement(2629091..2629618) AAEDFP_00849;AKJFEH_02320;BFAOAP_02943;BIDKHD_01652;BJIIEG_00672;BJKGBB_02290;BNFCCO_01199;BODMBB_02480;BOPMCK_01794;BPDKHC_02238;CDPMCH_02394;CHGPCO_01758;CMDIKE_01965;CMNCGK_02330;COMFNP_00660;DAGLGK_00177;DAGPJG_02779;DEFBHI_02311;DFLILH_02108;DHOPGE_02902;DJAJGG_02477;DNAMMH_00623;DNHFDD_02867;DPGNPC_01195;EBMNDJ_01075;EDPIJB_02237;EJLAKB_01116;FABDMP_01118;FAEPFC_01248;FBIILI_01245 peptide-methionine (S)-S-oxide reductase MsrA
73 group_255 gene_presence_absence HMPREF0351_RS03150 (group_255) group_255 | HMPREF0351_RS03150 | high confidence group_255 HTH gntR-type domain-containing protein HMPREF0351_RS03150 DUF979 domain-containing protein high 100.00 100.00 High-confidence locus-level GenBank rescue. identity=100.00; coverage=100.00 36 50 0.7200 50 50 1.0000 controls (vancomycin sensitive) -3.72 0.0249232 0.00144-0.4314 0.00143991 0.431393 1.01e-05 13.3220 Panaroo/Bakta+GenBank nucleotide_exact_or_contained 669691..670635 matched_representative_sequence=group_2555 AAEDFP_00851;AKJFEH_02316;BFAOAP_02898;BIDKHD_01654;BJIIEG_00674;BJKGBB_02294;BNFCCO_01201;BODMBB_02476;BOPMCK_01790;BPDKHC_02242;CDPMCH_02398;CHGPCO_01756;CMDIKE_01967;CMNCGK_02334;COMFNP_00662;DAGLGK_00175;DAGPJG_00161;DEFBHI_02313;DFLILH_02104;DHOPGE_00295;DJAJGG_02473;DNAMMH_00625;DNHFDD_00348;DPGNPC_01197;EBMNDJ_01073;EDPIJB_02233;EJLAKB_01118;FABDMP_01120;FAEPFC_01250;FBIILI_01247 DUF979 domain-containing protein
74 arsD gene_presence_absence ;arsD arsD | HMPREF0351_RS00095 | none confidence ;arsD hypothetical protein;Arsenical resistance operon transcriptional repressor ArsD HMPREF0351_RS00095 hypothetical protein none 43.58 2.65 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=43.58; coverage=2.65 6 50 0.1200 26 50 0.5200 controls (vancomycin sensitive) -3.49 0.135043 0.0502-0.3633 0.0502041 0.363252 5.94e-08 13.1147 Panaroo/Bakta+GenBank nucleotide_similarity complement(23568..23765) matched_representative_sequence=arsD AAEDFP_02759;BFAOAP_02996;BIDKHD_02914;BNFCCO_02951;COMFNP_02877;DAGPJG_02804;DHOPGE_02937;DNAMMH_02887;DNHFDD_02908;EJLAKB_02923;FABDMP_01954;FBIILI_02778;FMBLNF_01920;GEMMFG_01798;GJOFNM_02833;HKAALB_02735;IGDGNK_02933;JABKKB_02875;JAOBDG_02726;JFOMPD_02912;KAOGPO_02942;LKPDJB_01715;MBMNML_02938;MFDKLE_02820;NBBOMM_01554;NBICIC_02740;NHJIOO_02757;NPDFDF_02944;NPNGCM_02851;OFKADD_02856 hypothetical protein
75 group_4023 gene_presence_absence group_4023 group_4023 | HMPREF0351_RS02115 | none confidence group_4023 hypothetical protein;DUF5626 domain-containing protein HMPREF0351_RS02115 PTS transporter subunit EIIC none 13.38 2.78 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=13.38; coverage=2.78 6 50 0.1200 26 50 0.5200 controls (vancomycin sensitive) -3.49 0.135043 0.0502-0.3633 0.0502041 0.363252 5.94e-08 13.1147 Panaroo/Bakta+GenBank nucleotide_similarity complement(440661..442034) matched_representative_sequence=group_4023 AAEDFP_02758;BFAOAP_02997;BIDKHD_02913;BNFCCO_02950;COMFNP_02876;DAGPJG_02805;DHOPGE_02938;DNAMMH_02886;DNHFDD_02907;EJLAKB_02922;FABDMP_01953;FBIILI_02779;FMBLNF_01921;GEMMFG_01797;GJOFNM_02832;HKAALB_02736;IGDGNK_02934;JABKKB_02874;JAOBDG_02725;JFOMPD_02911;KAOGPO_02943;LKPDJB_01714;MBMNML_02939;MFDKLE_02821;NBBOMM_01553;NBICIC_02739;NHJIOO_02758;NPDFDF_02943;NPNGCM_02850;OFKADD_02855 PTS transporter subunit EIIC
76 group_3339 gene_presence_absence group_3339 group_3339 | HMPREF0351_RS15400 | none confidence group_3339 ORC1/DEAH AAA+ ATPase domain-containing protein HMPREF0351_RS15400 hypothetical protein none 28.21 2.58 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=28.21; coverage=2.58 6 50 0.1200 26 50 0.5200 controls (vancomycin sensitive) -3.49 0.135043 0.0502-0.3633 0.0502041 0.363252 5.94e-08 13.1147 Panaroo/Bakta+GenBank nucleotide_similarity 376524..376976 matched_representative_sequence=group_3339 AAEDFP_02757;BFAOAP_02998;BIDKHD_02912;BNFCCO_02949;COMFNP_02875;DAGPJG_02806;DHOPGE_02939;DNAMMH_02885;DNHFDD_02906;EJLAKB_02921;FABDMP_01952;FBIILI_02780;FMBLNF_01922;GEMMFG_01796;GJOFNM_02831;HKAALB_02737;IGDGNK_02935;JABKKB_02873;JAOBDG_02724;JFOMPD_02910;KAOGPO_02944;LKPDJB_01713;MBMNML_02940;MFDKLE_02822;NBBOMM_01552;NBICIC_02738;NHJIOO_02759;NPDFDF_02942;NPNGCM_02849;OFKADD_02854 hypothetical protein
77 group_4054 gene_presence_absence group_4054 group_4054 | HMPREF0351_RS04055 | none confidence group_4054 hypothetical protein;Transporter HMPREF0351_RS04055 HNH endonuclease none 20.41 0.98 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=20.41; coverage=0.98 0 50 0.0000 12 50 0.2400 controls (vancomycin sensitive) -4.06 0.030495 0.00175-0.5313 0.00175046 0.53126 8.48e-06 13.1069 Panaroo/Bakta+GenBank nucleotide_similarity 836051..836395 matched_representative_sequence=group_4054 AKJFEH_02601;BJIIEG_01968;CDPMCH_02073;CMNCGK_02011;EDPIJB_02003;FBIILI_02000;FOJCEI_02179;GBBODN_01838;HBFAPG_01957;JHCCBL_02515;JJJGHN_02035;MECBCD_01927 HNH endonuclease
78 group_3407 gene_presence_absence group_3407 group_3407 | HMPREF0351_RS07295 | none confidence group_3407 Glycosyltransferase putative HMPREF0351_RS07295 alpha/beta hydrolase none 33.84 1.31 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=33.84; coverage=1.31 0 50 0.0000 12 50 0.2400 controls (vancomycin sensitive) -4.06 0.030495 0.00175-0.5313 0.00175046 0.53126 8.48e-06 13.1069 Panaroo/Bakta+GenBank nucleotide_similarity complement(1489360..1490361) matched_representative_sequence=group_3407 58_refound_831_pseudo;AKJFEH_02600;BJIIEG_01967;CDPMCH_02074;CMNCGK_02010;EDPIJB_02002;FBIILI_01999;FOJCEI_02178;GBBODN_01839;HBFAPG_01956;JJJGHN_02036;MECBCD_01928 alpha/beta hydrolase
79 group_3095 gene_presence_absence recX group_3095 | HMPREF0351_RS04525 | none confidence recX Stage 0 sporulation A-like protein HMPREF0351_RS04525 recX recombination regulator RecX none 29.31 2.69 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=29.31; coverage=2.69 22 50 0.4400 2 50 0.0400 cases (vancomycin resistant) 2.92 15.3158 3.83-61.25 3.82955 61.2536 7.58e-07 13.0573 Panaroo/Bakta+GenBank nucleotide_similarity 926299..927096 matched_representative_sequence=group_3095 BBAPLL_02224;BCEGCL_01806;CMDIKE_02307;DJAJGG_02146;DPGNPC_01955;EAHGHC_02201;EBMNDJ_02523;EMDJIL_02497;FAEPFC_02048;FIOBDN_02076;FNLDHP_01983;FOJCEI_02359;HLAPEO_01809;HMGPKC_01331;KFIHCG_02158;KFKELN_02237;LJIIAA_02417;LNBAGD_02091;LPODHN_02003;NJLMCP_02521;NPNGCM_01830;ODHHNB_02027;OOIKMG_02159;OPKPKN_02580 recombination regulator RecX
80 group_2101 gene_presence_absence group_2101 group_2101 | HMPREF0351_RS00065 | none confidence group_2101 histidine kinase HMPREF0351_RS00065 adenylosuccinate synthase none 34.94 1.15 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=34.94; coverage=1.15 22 50 0.4400 2 50 0.0400 cases (vancomycin resistant) 2.92 15.3158 3.83-61.25 3.82955 61.2536 7.58e-07 13.0573 Panaroo/Bakta+GenBank nucleotide_similarity 15103..16395 matched_representative_sequence=group_2101 48_refound_664;BBAPLL_02223;BCEGCL_01807;CMDIKE_02306;DJAJGG_02145;DPGNPC_01954;EAHGHC_02202;EBMNDJ_02524;EMDJIL_02498;FAEPFC_02049;FIOBDN_02077;FNLDHP_01984;FOJCEI_02358;HLAPEO_01810;HMGPKC_01330;KFIHCG_02157;KFKELN_02238;LJIIAA_02416;LPODHN_02004;NJLMCP_02522;NPNGCM_01831;ODHHNB_02028;OOIKMG_02158;OPKPKN_02581 adenylosuccinate synthase
81 group_3889 gene_presence_absence group_3889 group_3889 | HMPREF0351_RS07075 | none confidence group_3889 hypothetical protein;YokE-like PH domain-containing protein HMPREF0351_RS07075 IS30 family transposase none 32.27 3.31 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=32.27; coverage=3.31 6 50 0.1200 28 50 0.5600 controls (vancomycin sensitive) -2.74 0.115316 0.04279-0.3108 0.0427889 0.310778 1.39e-07 12.9733 Panaroo/Bakta+GenBank nucleotide_similarity 1456563..1457522 matched_representative_sequence=group_3889 16_refound_239_pseudo;AKJFEH_00290;BFAOAP_02203;BIDKHD_00549;BNFCCO_00964;BPDKHC_00347;CDPMCH_00636;CMNCGK_00495;DAGPJG_02915;DHOPGE_00595;DNAMMH_00792;EDPIJB_00544;EJLAKB_01771;FBIILI_00292;FOJCEI_00633;GJOFNM_02973;HBFAPG_00398;HKAALB_01062;IAFNHG_01903;IGDGNK_01448;IIIHAF_01363;IPIGJP_01930;JABKKB_00648;JAOBDG_00767;JFOMPD_01261;JJJGHN_00447;KAOGPO_00170;MBMNML_00801;MECBCD_02004;NBICIC_01116 IS30 family transposase
82 group_3313 gene_presence_absence group_3313 group_3313 | HMPREF0351_RS02240 | none confidence group_3313 Peptidase HMPREF0351_RS02240 PLP-dependent cysteine synthase family protein none 24.95 2.73 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=24.95; coverage=2.73 6 50 0.1200 28 50 0.5600 controls (vancomycin sensitive) -2.74 0.115316 0.04279-0.3108 0.0427889 0.310778 1.39e-07 12.9733 Panaroo/Bakta+GenBank nucleotide_similarity complement(470653..471570) matched_representative_sequence=group_3313 AKJFEH_00291;BFAOAP_02204;BIDKHD_00550;BNFCCO_00965;BPDKHC_00348;CDPMCH_00635;CMNCGK_00494;DAGPJG_02916;DHOPGE_00594;DNAMMH_00791;DNHFDD_01848;EDPIJB_00543;EJLAKB_01770;FBIILI_00293;FOJCEI_00634;GJOFNM_02974;HBFAPG_00397;HKAALB_01063;IAFNHG_01902;IGDGNK_01447;IIIHAF_01364;IPIGJP_01931;JABKKB_00649;JAOBDG_00766;JFOMPD_01262;JJJGHN_00448;KAOGPO_00169;MBMNML_00802;MECBCD_00721;NBICIC_01117 PLP-dependent cysteine synthase family protein
83 group_1747 gene_presence_absence group_1747 group_1747 | HMPREF0351_RS08590 | none confidence group_1747 HAD hydrolase family IA;hypothetical protein HMPREF0351_RS08590 VOC family protein none 40.85 2.01 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=40.85; coverage=2.01 8 50 0.1600 30 50 0.6000 controls (vancomycin sensitive) -2.77 0.134426 0.0533-0.339 0.0533023 0.339018 1.23e-07 12.8052 Panaroo/Bakta+GenBank nucleotide_similarity complement(1757298..1757672) matched_representative_sequence=group_1747 AKJFEH_00282;BFAOAP_02195;BIDKHD_00541;BNFCCO_00956;BPDKHC_00339;CDPMCH_00644;CMNCGK_00503;DAGPJG_02239;DEFBHI_01355;DHOPGE_02379;DNAMMH_00800;DNHFDD_02317;EDPIJB_00552;EJLAKB_01779;FBIILI_00284;FOJCEI_00625;GJOFNM_02340;HBFAPG_00406;HKAALB_02258;HMJOEN_01967;IAFNHG_01911;IGDGNK_01456;IIIHAF_02354;IPIGJP_01922;JABKKB_00640;JAOBDG_02744;JFOMPD_02515;JJJGHN_00439;KAOGPO_00179;LJIIAA_00461 VOC family protein
84 group_1328 gene_presence_absence group_1328 group_1328 | HMPREF0351_RS01545 | none confidence group_1328 Lichenan-specific phosphotransferase enzyme iib component (Pts system lichenan-specific eiib component) (Eiib-lic) HMPREF0351_RS01545 PTS sugar transporter subunit IIB none 95.64 23.36 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=95.64; coverage=23.36 37 50 0.7400 50 50 1.0000 controls (vancomycin sensitive) -3.6 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.51e-05 12.7846 Panaroo/Bakta+GenBank nucleotide_similarity 313977..314297 matched_representative_sequence=group_1328 AAEDFP_00854;AKJFEH_02618;BFAOAP_02895;BIDKHD_01842;BJIIEG_00677;BJKGBB_02470;BNFCCO_01204;BODMBB_02625;BOPMCK_02526;BPDKHC_02439;CDPMCH_02660;CHGPCO_01753;CMDIKE_01970;CMNCGK_02554;COMFNP_00665;DAGLGK_00172;DAGPJG_00164;DEFBHI_02316;DFLILH_02101;DHOPGE_00292;DJAJGG_02593;DNAMMH_00628;DNHFDD_00351;DPGNPC_01200;EBMNDJ_01070;EDPIJB_02539;EJLAKB_01121;FABDMP_01123;FAEPFC_01253;FBIILI_01250 PTS sugar transporter subunit IIB
85 group_834 gene_presence_absence HMPREF0351_RS01550-like (group_834) group_834 | HMPREF0351_RS01550 | medium confidence group_834 Lichenan-specific phosphotransferase enzyme IIA component HMPREF0351_RS01550 PTS lactose/cellobiose transporter subunit IIA medium 99.37 65.41 Medium-confidence locus-level GenBank rescue. identity=99.37; coverage=65.41 37 50 0.7400 50 50 1.0000 controls (vancomycin sensitive) -3.6 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.51e-05 12.7846 Panaroo/Bakta+GenBank nucleotide_similarity 314323..314640 matched_representative_sequence=group_834 AAEDFP_00855;AKJFEH_02619;BFAOAP_02894;BIDKHD_01841;BJIIEG_00678;BJKGBB_02469;BNFCCO_01205;BODMBB_02626;BOPMCK_02527;BPDKHC_02440;CDPMCH_02659;CHGPCO_01752;CMDIKE_01971;CMNCGK_02555;COMFNP_00666;DAGLGK_00171;DAGPJG_00165;DEFBHI_02317;DFLILH_02100;DHOPGE_00291;DJAJGG_02592;DNAMMH_00629;DNHFDD_00352;DPGNPC_01201;EBMNDJ_01069;EDPIJB_02540;EJLAKB_01122;FABDMP_01124;FAEPFC_01254;FBIILI_01251 PTS lactose/cellobiose transporter subunit IIA
86 gmuD gene_presence_absence ;gmuD gmuD | HMPREF0351_RS01540 | none confidence ;gmuD hypothetical protein;6-phospho-beta-glucosidase gmuD HMPREF0351_RS01540 glycoside hydrolase family 1 protein none 94.56 7.77 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=94.56; coverage=7.77 37 50 0.7400 50 50 1.0000 controls (vancomycin sensitive) -3.6 0.0275028 0.001584-0.4774 0.00158426 0.477448 2.51e-05 12.7846 Panaroo/Bakta+GenBank nucleotide_similarity 312098..313513 matched_representative_sequence=gmuD AAEDFP_00853;AKJFEH_02312;BFAOAP_02896;BIDKHD_01656;BJIIEG_00676;BJKGBB_02298;BNFCCO_01203;BODMBB_02932;BOPMCK_01788;BOPMCK_02846;BPDKHC_02246;CDPMCH_02402;CHGPCO_01754;CMDIKE_01969;CMNCGK_02338;COMFNP_00664;DAGLGK_00173;DAGPJG_00163;DEFBHI_02315;DFLILH_02102;DHOPGE_00293;DJAJGG_02892;DNAMMH_00627;DNHFDD_00350;DPGNPC_01199;EBMNDJ_01071;EDPIJB_02229;EJLAKB_01120;FABDMP_01122;FAEPFC_01252 glycoside hydrolase family 1 protein
87 group_3276 gene_presence_absence rpsF group_3276 | HMPREF0351_RS00035 | none confidence rpsF Resolvase HMPREF0351_RS00035 rpsF 30S ribosomal protein S6 none 35.42 1.60 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=35.42; coverage=1.60 13 50 0.2600 0 50 0.0000 cases (vancomycin resistant) 3.56 36.36 2.094-631.2 2.09447 631.209 2.55e-05 12.7777 Panaroo/Bakta+GenBank nucleotide_similarity 8985..9284 matched_representative_sequence=group_3276 EAHGHC_02519;EBMNDJ_02631;EMDJIL_02470;FNLDHP_02744;GCGADK_02809;HOGLGD_02601;KFIHCG_02588;LKPDJB_02394;NJLMCP_02699;ODBCAF_02635;ODHHNB_02739;OOIKMG_02610;PDKMDO_02787 30S ribosomal protein S6
88 group_3410 gene_presence_absence rplI group_3410 | HMPREF0351_RS00055 | none confidence rplI 50S ribosomal protein L9 HMPREF0351_RS00055 rplI 50S ribosomal protein L9 none 43.55 1.94 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=43.55; coverage=1.94 0 50 0.0000 12 50 0.2400 controls (vancomycin sensitive) -3.87 0.030495 0.00175-0.5313 0.00175046 0.53126 1.81e-05 12.7776 Panaroo/Bakta+GenBank nucleotide_similarity 12230..12682 matched_representative_sequence=group_3410 CDPMCH_01834;DHOPGE_01521;DNHFDD_01777;HKAALB_01889;JAOBDG_01166;MFDKLE_01696;NBICIC_01556;NHJIOO_01615;NPNGCM_01728;OFKADD_01705;PCBIPO_01699;PDOPEE_01755 50S ribosomal protein L9
89 group_3894 gene_presence_absence group_3894 group_3894 | HMPREF0351_RS01510 | none confidence group_3894 HTH asnC-type domain-containing protein HMPREF0351_RS01510 glycosyltransferase family protein none 30.50 7.23 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=30.50; coverage=7.23 5 50 0.1000 24 50 0.4800 controls (vancomycin sensitive) -3.3 0.130747 0.04614-0.3705 0.046145 0.370457 2.07e-07 12.6192 Panaroo/Bakta+GenBank nucleotide_similarity 304524..305930 matched_representative_sequence=group_3894 AAEDFP_00580;BFAOAP_00109;BIDKHD_00682;BNFCCO_01312;DAGPJG_01848;DHOPGE_00212;DNAMMH_03005;DNHFDD_00109;EJLAKB_01153;FABDMP_01955;FBIILI_02824;FMBLNF_01919;GEMMFG_01799;GJOFNM_00753;HKAALB_02137;IGDGNK_00883;JABKKB_00779;JAOBDG_00876;JFOMPD_00680;KAOGPO_02017;MBMNML_00746;MFDKLE_00223;NBBOMM_01555;NBICIC_00639;NPDFDF_01329;NPNGCM_00100;OFKADD_00621;PCBIPO_00223;PDOPEE_00571 glycosyltransferase family protein
90 group_4457 gene_presence_absence group_4457 group_4457 | HMPREF0351_RS00115 | none confidence group_4457 Transposase IS116/IS110/IS902 family HMPREF0351_RS00115 acyltransferase domain-containing protein none 38.25 2.25 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=38.25; coverage=2.25 0 50 0.0000 11 50 0.2200 controls (vancomycin sensitive) -3.98 0.0340077 0.001944-0.595 0.00194385 0.594968 2.89e-05 12.4171 Panaroo/Bakta+GenBank nucleotide_similarity 27767..28645 matched_representative_sequence=group_4457 BFAOAP_03110;DHOPGE_03086;DNHFDD_03045;JAOBDG_02873;KAOGPO_03084;MFDKLE_02965;NBICIC_02896;NHJIOO_02889;OFKADD_03010;PCBIPO_02991;PDOPEE_03163 acyltransferase domain-containing protein
91 group_619 gene_presence_absence group_619 group_619 | HMPREF0351_RS05350 | none confidence group_619 Group II intron reverse transcriptase/maturase HMPREF0351_RS05350 RecQ family ATP-dependent DNA helicase none 21.52 0.89 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=21.52; coverage=0.89 12 50 0.2400 0 50 0.0000 cases (vancomycin resistant) 3.5 32.7922 1.882-571.3 1.88232 571.28 5.89e-05 12.2652 Panaroo/Bakta+GenBank nucleotide_similarity 1092405..1093808 matched_representative_sequence=group_619 BBAPLL_01893;BCEGCL_01461;EAHGHC_01854;EMDJIL_01730;FNLDHP_01409;GCGADK_02749;HLAPEO_01943;KFKELN_01810;NBNIPB_02142;ODBCAF_02270;OPKPKN_01899;PDKMDO_02729 RecQ family ATP-dependent DNA helicase
92 group_4367 gene_presence_absence group_4367 group_4367 | HMPREF0351_RS06650 | none confidence group_4367 DUF4355 domain-containing protein;hypothetical protein HMPREF0351_RS06650 AbrB/MazE/SpoVT family DNA-bindingdomain-containing protein none 29.33 4.13 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=29.33; coverage=4.13 12 50 0.2400 0 50 0.0000 cases (vancomycin resistant) 3.45 32.7922 1.882-571.3 1.88232 571.28 6.67e-05 12.2112 Panaroo/Bakta+GenBank nucleotide_similarity 1361813..1362049 matched_representative_sequence=group_4367 73_refound_962_pseudo;BBAPLL_02807;CMDIKE_02841;DPGNPC_03047;EAHGHC_02819;EMDJIL_02728;FAEPFC_02933;FIOBDN_02823;FNLDHP_02929;GCGADK_02971;HLAPEO_02832;HOGLGD_02693 AbrB/MazE/SpoVT family DNA-bindingdomain-containing protein
93 vanZA gene_presence_absence vanZ-A vanZA | HMPREF0351_RS00105 | none confidence vanZ-A glycopeptide resistance protein VanZ-A HMPREF0351_RS00105 VanZ family protein none 33.13 3.91 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=33.13; coverage=3.91 25 50 0.5000 4 50 0.0800 cases (vancomycin resistant) 2.49 10.3333 3.397-31.43 3.39702 31.4328 1.61e-06 12.1624 Panaroo/Bakta+GenBank nucleotide_similarity complement(25557..26060) matched_representative_sequence=vanZA DAGPJG_02755;EAHGHC_02515;EBMNDJ_02627;EMDJIL_02474;FIOBDN_02839;FNLDHP_02911;GBBODN_02595;GCGADK_02813;GJOFNM_02702;HOGLGD_02597;JAJEAH_01982;JGBMCF_02001;JHCCBL_02628;JJIELG_02226;KFIHCG_02584;LJIIAA_03087;LKPDJB_02398;LNBAGD_02787;MHHDHD_02726;MMOFNP_01981;NBNIPB_02289;NCCLJD_01985;NJLMCP_02695;ODBCAF_02631;ODHHNB_02743;OIGEFE_01996;OOIKMG_02606;OPKPKN_02931;PDKMDO_02783 VanZ family protein
94 group_2450 gene_presence_absence croR group_2450 | HMPREF0351_RS12960 | none confidence croR Enterocin A immunity protein HMPREF0351_RS12960 croR response regulator transcription factor CroR none 20.33 4.80 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=20.33; coverage=4.80 7 50 0.1400 28 50 0.5600 controls (vancomycin sensitive) -2.57 0.136116 0.05254-0.3526 0.0525433 0.352616 5.43e-07 12.1423 Panaroo/Bakta+GenBank nucleotide_similarity 2680627..2681316 matched_representative_sequence=group_2450 AAEDFP_01749;AKJFEH_00292;BFAOAP_02205;BIDKHD_00551;BNFCCO_00966;BPDKHC_00349;CDPMCH_00634;CMNCGK_00493;DAGPJG_02128;DHOPGE_00593;DNAMMH_00790;DNHFDD_01847;EDPIJB_00542;EJLAKB_01769;FBIILI_00294;FOJCEI_00635;GJOFNM_02137;HBFAPG_00396;HKAALB_01064;IAFNHG_01901;IGDGNK_01446;IIIHAF_01365;IPIGJP_01932;JABKKB_00650;JAOBDG_00765;JFOMPD_01263;JJJGHN_00449;KAOGPO_00168;MBMNML_00803;MECBCD_00722 response regulator transcription factor CroR
95 group_4272 gene_presence_absence rpsR group_4272 | HMPREF0351_RS00045 | none confidence rpsR 30S ribosomal protein S18 HMPREF0351_RS00045 rpsR 30S ribosomal protein S18 none 48.55 2.84 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=48.55; coverage=2.84 20 50 0.4000 2 50 0.0400 cases (vancomycin resistant) 2.78 13.0393 3.251-52.3 3.25117 52.2964 4.04e-06 12.0984 Panaroo/Bakta+GenBank nucleotide_similarity 9872..10108 matched_representative_sequence=group_4272 BBAPLL_02716;BCEGCL_02701;CMDIKE_02786;DEFBHI_02833;DJAJGG_02768;DPGNPC_02873;EAHGHC_02725;EBMNDJ_02864;EMDJIL_02663;FAEPFC_02867;FNLDHP_02799;HLAPEO_02593;HMJOEN_02612;HOGLGD_02650;KFIHCG_02741;KFKELN_02765;LJIIAA_02935;LKPDJB_02355;LPODHN_02888;MHHDHD_02762;NJLMCP_02719;OPKPKN_02750 30S ribosomal protein S18
96 group_2753 gene_presence_absence group_2753 group_2753 | HMPREF0351_RS05105 | none confidence group_2753 PTS EIIA type-2 domain-containing protein HMPREF0351_RS05105 PTS sugar transporter subunit IIA none 96.73 37.04 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=96.73; coverage=37.04 3 50 0.0600 23 50 0.4600 controls (vancomycin sensitive) -2.6 0.0862262 0.02553-0.2913 0.0255273 0.291256 2.77e-06 12.0933 Panaroo/Bakta+GenBank nucleotide_similarity 1037363..1037821 matched_representative_sequence=group_2753 54_refound_794_pseudo;AAEDFP_02049;AKJFEH_02777;BIDKHD_02499;BJIIEG_01945;BJKGBB_02223;BNFCCO_02833;BOPMCK_02435;BPDKHC_02069;CDPMCH_02785;CMNCGK_02150;COMFNP_02313;DNAMMH_03100;EDPIJB_02670;EJLAKB_02422;FBIILI_02185;HBFAPG_02638;HLFPPN_02515;IIIHAF_02774;JABKKB_02593;JJJGHN_02734;LLNEMC_02657;MECBCD_02434;NPDFDF_02523;PEEHNF_02347;POKLJE_00715 PTS sugar transporter subunit IIA
97 group_2228 gene_presence_absence uxuA group_2228 | HMPREF0351_RS06980 | none confidence uxuA Mannonate dehydratase HMPREF0351_RS06980 uxuA mannonate dehydratase none 68.33 2.13 Displayed from Panaroo/Bakta annotation; no stronger GenBank rescue available. identity=68.33; coverage=2.13 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity complement(1435402..1436484) matched_representative_sequence=group_2228 AAEDFP_02647;AKJFEH_00286;BFAOAP_02199;BIDKHD_00545;BNFCCO_00960;BPDKHC_00343;CDPMCH_00640;CMNCGK_00499;DAGPJG_02243;DEFBHI_01359;DHOPGE_02375;DNAMMH_00796;DNHFDD_02313;EDPIJB_00548;EJLAKB_01775;FBIILI_00288;FOJCEI_00629;GJOFNM_02344;HBFAPG_00402;HKAALB_01058;HMJOEN_01963;IAFNHG_01907;IGDGNK_01452;IIIHAF_02358;IPIGJP_01926;JABKKB_00644;JAOBDG_02539;JFOMPD_02519;JJJGHN_00443;KAOGPO_00175 mannonate dehydratase
98 group_1797 gene_presence_absence group_1797 group_1797 | HMPREF0351_RS15275 | none confidence group_1797 beta-N-acetylhexosaminidase HMPREF0351_RS15275 prealbumin-like fold domain-containing protein none 27.16 0.85 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=27.16; coverage=0.85 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity complement(1746232..1746747) matched_representative_sequence=group_1797 AAEDFP_02870;AKJFEH_00281;BFAOAP_02194;BIDKHD_00540;BNFCCO_00955;BPDKHC_00338;CDPMCH_00645;CMNCGK_00504;DAGPJG_02238;DEFBHI_01354;DHOPGE_02380;DNAMMH_00801;DNHFDD_02318;EDPIJB_00553;EJLAKB_01780;FBIILI_00283;FOJCEI_00624;GJOFNM_02339;HBFAPG_00407;HKAALB_02257;HMJOEN_01968;IAFNHG_01912;IGDGNK_01457;IIIHAF_02353;IPIGJP_01921;JABKKB_00639;JAOBDG_02745;JFOMPD_02514;JJJGHN_00438;KAOGPO_00180 prealbumin-like fold domain-containing protein
99 group_1632 gene_presence_absence group_1632 group_1632 | HMPREF0351_RS07100 | none confidence group_1632 Major facilitator superfamily (MFS) profile domain-containing protein;hypothetical protein HMPREF0351_RS07100 GlsB/YeaQ/YmgE family stress response membraneprotein none 16.67 1.16 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=16.67; coverage=1.16 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity complement(1461988..1462230) matched_representative_sequence=group_1632 49_refound_700_pseudo;AKJFEH_00283;BFAOAP_02196;BIDKHD_00542;BNFCCO_00957;BPDKHC_00340;CDPMCH_00643;CMNCGK_00502;DAGPJG_02240;DEFBHI_01356;DHOPGE_02378;DNAMMH_00799;DNHFDD_02316;EDPIJB_00551;EJLAKB_01778;FBIILI_00285;FOJCEI_00626;GJOFNM_02341;HBFAPG_00405;HKAALB_02259;HMJOEN_01966;IAFNHG_01910;IGDGNK_01455;IIIHAF_02355;IPIGJP_01923;JABKKB_00641;JAOBDG_02542;JFOMPD_02516;JJJGHN_00440;KAOGPO_00178 GlsB/YeaQ/YmgE family stress response membraneprotein
100 group_1361 gene_presence_absence group_1361 group_1361 | HMPREF0351_RS06990 | none confidence group_1361 HTH gntR-type domain-containing protein HMPREF0351_RS06990 GntR family transcriptional regulator none 68.01 2.83 No confident reference gene assignment; report the stable Panaroo cluster ID. identity=68.01; coverage=2.83 9 50 0.1800 30 50 0.6000 controls (vancomycin sensitive) -2.63 0.153861 0.06255-0.3785 0.062545 0.3785 4.25e-07 12.0719 Panaroo/Bakta+GenBank nucleotide_similarity 1438305..1438967 matched_representative_sequence=group_1361 AAEDFP_02947;AKJFEH_00288;BFAOAP_02201;BIDKHD_00547;BNFCCO_00962;BPDKHC_00345;CDPMCH_00638;CMNCGK_00497;DAGPJG_02245;DEFBHI_01361;DHOPGE_02373;DNAMMH_00794;DNHFDD_02311;EDPIJB_00546;EJLAKB_01773;FBIILI_00290;FOJCEI_00631;GJOFNM_02346;HBFAPG_00400;HKAALB_01060;HMJOEN_01961;IAFNHG_01905;IGDGNK_01450;IIIHAF_02360;IPIGJP_01928;JABKKB_00646;JAOBDG_02537;JFOMPD_01259;JJJGHN_00445;KAOGPO_00173 GntR family transcriptional regulator

Showing 100 of 1025 rows.

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09 Reference annotation confidence guide

Brief interpretation: The confidence guide explains how reference annotation rescue should be interpreted. Low-confidence or unmatched markers should retain their stable Panaroo/SNP identifiers.
Annotation caveat: Reference annotation rescue is intended to improve interpretability of pangenome/SNP markers. Low-confidence matches should not be treated as definitive gene calls. Candidate hits should be validated in independent datasets and interpreted in the context of case (vancomycin resistant) versus control (vancomycin sensitive).
ConfidenceRuleInterpretation
high>=95% identity and >=90% coverage, or exact qualifier-level supportStrong reference-supported annotation
medium>=85% identity and >=70% coveragePlausible annotation; inspect manually
low>=60% identity and >=50% coverage, or weak/partial supportTentative annotation only
noneNo usable GenBank matchKeep the pangenome/SNP marker identifier

Reference annotation summary

metric	value
reference_cds_parsed	2560
reference_parse_warning	
panaroo_clusters_parsed	5195
annotation_engine	Panaroo/Bakta
fasta_records_parsed	290001
top_priority_input	rMAP_GWAS_top_priority_hits.tsv
all_significant_input	rMAP_GWAS_all_significant_hits.tsv
method	GenBank qualifier matching plus pure-Python nucleotide similarity rescue when Panaroo representative sequences are available
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10 Input validation

Brief interpretation: The validation report checks input consistency, sample counts, paired FASTQ arrays, and phenotype coding before downstream interpretation.
rMAP-GWAS sample-set input validation report
================================================
Cases (vancomycin resistant): 50
Controls (vancomycin sensitive): 50
Total samples: 100
Case (vancomycin resistant) label: case (vancomycin resistant)
Control (vancomycin sensitive) label: control (vancomycin sensitive)
Phenotype display metadata values provided: yes
Unique phenotype display values: vancomycin resistant, vancomycin sensitive

Status: PASS
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11 Panaroo summary

Brief interpretation: The Panaroo summary describes the pangenome graph and gene matrix generated from Bakta-derived GFF files.
Panaroo output files:
panaroo_out/combined_DNA_CDS.fasta
panaroo_out/combined_protein_CDS.fasta
panaroo_out/combined_protein_cdhit_out.txt
panaroo_out/combined_protein_cdhit_out.txt.clstr
panaroo_out/final_graph.gml
panaroo_out/gene_data.csv
panaroo_out/gene_presence_absence.Rtab
panaroo_out/gene_presence_absence.csv
panaroo_out/gene_presence_absence_roary.csv
panaroo_out/pan_genome_reference.fa
panaroo_out/pre_filt_graph.gml
panaroo_out/struct_presence_absence.Rtab
panaroo_out/summary_statistics.txt
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12 Interpretation guidance

Brief interpretation: These notes summarize major microbial GWAS caveats, including population structure, recombination, small sample size, and phenotype misclassification.
Microbial GWAS can be confounded by lineage structure, outbreak clustering, recombination, phenotype misclassification, small sample size, species background, variable sequencing depth/assembly quality, point mutations outside gene presence/absence, and co-carriage of multiple resistance genes in the same antibiotic class. Use the population-structure plots, QC outputs, optional SNP GWAS, and, for recombining species, consider enabling Gubbins to reduce recombinant-block-driven SNP associations. Interpret candidate markers as associations with case (vancomycin resistant) versus control (vancomycin sensitive), not as proven causal determinants or standalone clinical resistance calls.
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13 Key output files

Brief interpretation: This section records the key files needed for review, reruns, sharing, and downstream manuscript or supplementary reporting.

Click any output card to download the file. The cards are kept inside one responsive frame, so this section should not require horizontal scrolling.

PhenotyperMAP_GWAS_phenotype_legend.tsvMetadata-derived legend used throughout this report.Download GWASpyseer_gene_assoc.tsvRaw pyseer gene association results. Rows detected: 3411.Download SNP GWASpyseer_snp_assoc.tsvRaw pyseer SNP marker association results. Rows detected: 100138.Download PriorityrMAP_GWAS_top_priority_hits.annotated.tsvRanked top gene hits with reference annotation columns.Download Structuremash_distances.tsvSquare Mash distance matrix used for correction and visualization.Download
rMAP-GWAS report generated from successful Cromwell workflow outputs.